Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    <--                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            <--------                                                                                         --------->ATHB51     --------->YAB1                                                  <---------ANAC58    <--------HAHB4  <----------DOF2                  ------->TEIL         --------->MYB52(1)               <---------ICU4 -----ICU4                      <---------YAB1          <-----------GT1        ----------->HVH21  <-- ---->YAB1                    --------->YAB1  --------->ARR11(3)     <---------ZAT6     <---------YAB1 ----ATHB12                  <---------YAB1 --------->ICU4           <---------ANAC58   --------->ICU4 ->WOX13(1)              <----------DOF2  ---------->DOF2 <------------MYB.PH3(1)     --------->YAB1   acgactttcataagaccaaaatgttttctttatgatgaattttgtaaagatgtggatttaacggtttcatagcgttatcaaatgacactcataattaatt  15798700       --------->ZAT18       <---------ZAT18  <---------ANAC55(1)  <---------ANAC58  --------->TGA1a  --------->ANAC55(2)  <---------ANAC46  =====================================MYC_MYB                  <---------YAB1  <---------ANAC58                                             --------->TOE2(3)  <---------ANAC55(2)                                         <---------ICU4  <---------TGA1a             <--------P                      --------->YAB1 -------ANAC58                <---------MYB52(1)              <--------HAHB4                        - >AHL20(1)                  <---------MYB46(3)               <------ZmHOX2a(2)                ------- -AHL20(2)                 <---------TOE1(2)                 <---------ATHB12                 ------- >AHL20(2)        --------->YAB1--------->MYB52(2) <----------DOF2                            <------ -AHL20(1)  --------->YAB1 <---------TOE2(2)   --------->ARR14(2)   ---------->DOF2 --------->At4g35610 -------ANAC58   <---------ATHB12              <---------ARR14(2)--------->AHL20(2) <---------At4g35610   gcatacgtgtgcaatcgcaatcgtaatcgctggttagttttgttttgcaaatactttgtttcgatcattaaaaagaaaacattgtaagctgttgagaatc  15798800                                                                       --------->At4g35610                                                                       <---------At4g35610                                                                     <-----------GT1                                                                 <---------YAB1                                                                --------->AHL20(1)                  -    <---------ICU4                                              <---------AHL20(2)            -------    --------->YAB1                                              <---------AHL20(1)            -------   <---------ATHB12                                            --------->YAB1                <-------  ------>MYB83                                               --------->AHL20(2)            --------->YAB1  ------>MYB46(1)                                          <---------YAB1                --------->AHL20(2) --------->WOX13(1)                                        --------->ICU4                --------->AHL20(1) -------->AtMYB61                                         --------->TOE2(3)             --------->YAB1 -->GLK1(2)                                    <<<<<<<<<RAP2.2<---------YAB1          --------->AHL20(2) -->ARR14(2)                                  <---------YAB1<---------ICU4        <----------ID1----- ---ARR14(2)                                  <---------TOE2(3)--------->AHL20(2) ----------->GT1----   gaccaatcatcaaactgtaatgttccatctaaatctaattcattcatttagattggataacattattatatttagctcccaaaaacgaaaaaataataat  15798900                                                                ------->GAMYB                                                             --------->MYB52(1)                                                          --------->ANAC46                                                          --------->ANAC58                                                          --------->ANAC58                               <---------WRKY18(1)      ---------->DOF2                --------->MYB52(1)     <---------MYB52(2)       ----------->HVH21    ----------->GT1                    ----------->HVH21 -------->YAB1                --------->WRKY12     <------MYB46(1)          --------->ANAC58 ->HAHB4              <---------ZAT6               <------MYB83--------->MYB46(3)    <---------MYB59 -->YAB1          <---------MYB52(1)              --------->MYB59           --------->ANAC58 --YAB1          <<<<<<<<<<AtWER                  <---------MYB46(3)      ---------->DOF2 ---->ZAT6      <---------ZAT6--------->WRKY38(1)--------->ALFIN1<-----------HVH21  --------->At4g35610 ----->YAB1   <---------At5g28300  <-----------HVH21<---------PCF2 --------->SPL7----------->HVH21<--   actaataactaacatttactgttagtgaaacgatgaccgtcggatttataggtgggtcaaaagcaacggtccgatggaaagcaatgacctgactgaattg  15799000                                      <----------DOF2                             <-------MYC3                             ------->MYC3                             ------->MYC2                      --------->CCA1(2)                             <-------MYC2                      <---------GLK1(1)                             ------->PIF5                     <---------ARR11(3)                             <-------PIF5                     <---------ARR14(3)                             -------->ABF1              --------->HSFC1(1)                             ------->MYC4               <---------HSFC1(1)                             <-------MYC4               <---------HSFB2a(2)                            --------->ANAC46            --------->HSFB2a(2)                            <---------ANAC55(2)    <---------DAG2                            =====================bZIP_DOF     --------->ARR14(3)                            =====================bZIP_DOF--------->LBD16                            --------->ANAC55(2)--------->PCF5 --------->ARR11(3)                            --------->TGA1a    --------->TCP16(1)                            <-------                            <---------TGA1a  --------->ZAT18  <---------ARR14(2)            <--------            --------->YAB1  <---------O2     <---------ZAT18  --------->ARR14(2)            <--------            --------->ANAC46--------->O2   --------------->AtSPL8                      <----------DOF2   <---------MYB52(2)      ------------>OsbHLH66   <----------DOF2                  <-----------GT1 <-----------GT1    --------->CCA1(2)<-----------------AGL3 ----------->ARR10  <----------DOF2 -------REM1(1)--------->MYB52(1) --------->WOX13(1)   <---------LBD16     <-----------GT1  <--------   gtgtaactatccaaacacaacgatatgaacacgtggcaatcttttagtggacccttttccagaagatattcgacttatttccttttttgctatttcgtgg  15799100                                                                                   ----------->GT1               <---------------AtSPL8                                              <----------ID1  --------->AHL20(2) ----------->GT1                                  ---------->DOF2 --------->AHL20(2)<-------TEIL                            <---------------AGL15  ----------->GT1---- --LBD16    ------>ZmHOX2a(2)                              --------------->AGL15---------->DOF2 <---- -ANAC58   --------->At4g35610                --------->GLK1(2)     ------------------------>ANAC81 -ANAC58  <---------ARR11(3)                 <---------GLK1(2) ------------------------>ANAC81  ----- -ANAC46  --------->ARR11(3)<-------TEIL   *TSS          <-----------GT1   ---------->DOF2  ---------   aaaataaaaaatgatctgaagtacagaaaatacatttttaaaaaacaaattctgaaaattaacaattagagaaaaagaaaagaaaaggaaaaaaaaaaga  15799200                                                                           --------->RAP2.6(3)                                                                          --------->MYB52(1)                                                                         <-----------GT1                                                                       ------>ZmHOX2a(2)                                                                     <---------ARR11(3)                                                                 <---------ANAC55(1)                                                                 <---------ANAC58                              ------>ZmHOX2a(1)    <------NtERF2 <---------ANAC58 --------->HSFB2a(2)     <---------GLK1(1)        --------->LBD16--------->ANAC55(2) <---------HSFB2a(2)<---------ANAC46             --------->DEAR3(1)  --------->ARR11(3) ----->GLK1(1)      ----------->GT1      --------->GLK1(2)       <---------ANAC46--------->At4g35610 -----ARR11(3)      <---------ANAC58     <-----------ARR10       <---------AtLEC2<---------At4g35610 ---->ARR11(3)      <---------ANAC58    <---------GLK1(2)    <----------DOF2<---------ATERF1(2) ->DOF2---------->DOF2   --------->GLK1(1)      <---------LBD16  <---------ANAC55(2)             ----   tttctagtagaaagagagaagggcgtgaattcctgagcgagagattcttcgccggagtaatctctttgcgtgatcttaccggctgcttaattcgtcttcg  15799300        <------MYB46(1)        --------->MYB52(2)        <------MYB83        <---------MYB46(3)                                                                   <-------       <---------TOE2(2)                                           <---------WRKY45       <----------       <---------TOE1(2)                             <-----------GT1---------->DOF2  --------->ANAC58      <---------MYB52(1)                 <---------MYB46(3)        <---------WRKY38(1)    <---------AtMYB61    <---------MYB46(3)        <----------DOF2--------->MYB52(2)    <---------WRKY12  --------->ANAC58    --------->ATHB12  <---------CCA1(2)  ----------->GT1         <-----------HVH21   --------->ANAC46 <---------GLK1(2)    ---------->ID1    <---------TOE1(2)    <---------LBD16       <---------DOF5.7(2) ------->RAV1(2)   <-------TEIL         <---------TOE2(2) <---------MYB52(1)      <---------WRKY38(1)   cctgattcgttggtttcaaaattcgtctctctctttcaatcggaggttaattgtttttctgtttgggggtcaaagcgaagatggtgaacgctatggtgga  15799400                                                   ------>ZmHOX2a(2)                                                  --------->CCA1(2)                              <---------WOX13(1)  <------ZmHOX2a(2)                            --------->ATHB12     --------->ARR14(2)                         <--------                         ----------------->AGL1  <---------ARR14(2)                         ---------                         <-----------------AGL1  <---------ARR11(3)                         ---------                     ------>ZmHOX2a(2)           --------->ARR11(3)                 <-----------GT1                   --------->ARR14(2)            --------->AGP1                 <---------TOE1(2)  <----------ID1   <---------ARR14(2)            <---------AGP1                 <---------TOE2(2) --ANAC46        <---------YAB1                 <---------GLK1(1)       <------ZmHOX2a(2)   <-------- -RAV1(1)     --------->GLK1(2)          ------->TEIL    --------->CCA1(2)   <---------ANAC46   gagagcgacgagcgagatgctgatcgggcctgattgggctatgaacctcgagatctgtgatatgctcaatagcgatccagcgtatgtttccctctgctcc  15799500                                                                                                  <--                                                                                                  ---                                                                                               ------ -At4g35610                                                               --------->ZAT14     <------ >At4g35610                                                            ------>ZmHOX2a(1)    <-------- >ZAT2                                  <----------DOF2   <---------HSFB2a(2)       <-----------GT1 -ZAT2        ---------->ID1           <---------DAG2     --------->HSFB2a(2)    --------->YAB1------   ctccgattttgtttttgttgttatctctctctctctctctaccttttgttttctatacttctcgattagtctcctgtaaactattgtaactctctatacg  15799600  Previous    Next  AGI:  At4g32760.1    Description:  protein transporter. similar to VHS domain-containing protein / GAT domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G08790.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44057.1); contains InterPro domain GAT; (InterPro:IPR004152); contains InterPro domain ENTH/VHS (InterPro:IPR008942); contains InterPro domain VHS; (InterPro:IPR002014) Range:  from: 15799143    to: 15804180    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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