Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                       --------->TOE1(3)                               --------->ANAC58                               --------->ANAC58                               --------->ANAC46                              <---------ZAT18                                           <---------WOX13(1)                              <---------ZAT14                                         <------ZmHOX2a(1)                            --------->ZAT14                                    <---------ANAC58                          --------->ANAC46                                    <---------STY1(2)                        <---------ALFIN1                                      --------->STY1(2) ----- ------>NtERF2         <---------REM1(2)                                   <---------ANAC58    ------ -------->DEAR3(1)    ------>ZmHOX2a(1)                                    <---------ANAC58  ------>ZmHOX2a(2) ---------->HVH21   ------>ZmHOX2a(2)--------->TOE2(3)            --------->REM1(1)   ==============HOX2a_HOX2a -->ZmHOX2a(2) <---------WOX13(1)   ----------->RAV1(2)         <----------DOF2<---------ANAC58<----- --ATHB12    --------->ATHB12 --------->ZAT14                 --------->At4g35610   <---------TOE1(2)   cgacgacggtcgagttgattgatcctacacagtacacaacctgaatgttttcccatagcatctctgcttcatctattccttgctagtaggattgatccca  15785900      --------->AHL20(2)   --------->TOE2(3)                                                     <---------AHL20(2)   --------->TOE1(3)        ------->TEIL          <---------YAB1        --------->AHL20(2) ---->LBD16           --------->ATHB12       <---------AHL20(2)         <---------AHL20(2) --->HSFB2a(2)       --------->ICU4         --------->AHL20(2)    ----------->GT1 ----HSFB2a(2)       <---------YAB1         <---------AHL20(2) <---------ICU4                       <   gaaaaccataaatttgttttataaagattgaacgtttgtctatagattaattttcaatggattaaacattgtaaattaatggtcttatggattttgtgag  15786000                                                             --------->ANAC55(1)                                                             --------->ANAC46                                                     ------------>CBF                                                    --------->YAB1                                                --------->TGA2(2)                                               <-----------TGA1                       --------->AHL20(2)                                               <-----------HVH21            ----------->GT1                                              <---------ANAC58            ----------->GT1 --------->ZAT6         <---------TOE1(3)                    --------->ANAC55(2)        --------->DAG2 --------->YAB1         <---------TOE2(3)               ----------->HVH21   --------->ANAC58       --------->AHL20(1)      <---------YAB1                   --------->ANAC55(2)   --------->ANAC58       <---------AHL20(1)  <---------GLK1(2)                    <---------ANAC55(2)   --------->AtLEC2      --------->AHL20(2) ---------TOE2(3)              ---------->DOF2<---------ANAC58          ---------->DOF2<---------AHL20(2)   tttagattatcaaggttagaactgtgtattttgaaaagaataggtgatgcgtcatcacaatacacgcaaaaaaaaaaagtgaaaaatatataatactagt  15786100                                                                                              <------                                                                                              -------                                                                                             --------                                       ----------->ARR10                             --------->ANAC58                                ---------->DOF2        <---------MYB52(1)       <-----------GT1                       ----------------->AG          ----------->GT1   <-------GAMYBXXXXXXXXXXXXXXXXX                       ==============================================================================                       ----------------->AGL1--------->LBD16         <-------TEIL  ---------->DOF2 --         ---------->DOF2    ---------->DOF2------>ZmHOX2a(2)      <---------HSFB2a(1)--------->ANAC58   aagtagatttacaaagaagaatttttccaaaaaagaaagagttgatccgtcgaactcgttaattaagaaggctcgttgaattttacaaagcaaattctaa  15786200                                    <---------AHL20(2)                                   --------->ICU4                                   --------->AHL20(2)                                <---------AHL20(2)                               --------->AHL20(2)                               --------->AHL20(1)                               --------->ARR11(3)       ------->TEIL            <---------ARR11(3)     <-------TEIL              <---------AHL20(2)                                 ------------>CBF ---------AGL15          --------->HSFB2a(2)                             --------->HSFB2a(2) -------->AGL15       --------->ARR11(3)        <---------MYB46(3) <---------AHL20(2) --------->AGL3       <---------ARR11(3) <---------YAB1            --------->AHL20(2) XXX>MIR1887         --------->GLK1(1) --------->YAB1        ----------->GT1     --------->ANAC58 =========MADS_MADS  <---------GLK1(1)<---------YAB1        ----------->GT1      --------->ANAC58 -------->DOF2  <-----------GT1<---------AHL20(1)         ---------->DOF2<---------HSFB2a(2)  -------   aaaaagatgcatctatttttacgatatctcgaatatatttattatgagtgttgttgataagaaagataaaaaattcgagaggcaaacaatagttttctgc  15786300                                             ------>ZmHOX2a(2)                                           --------->ARR11(3)                  --------->ICU4           <---------ARR14(2)                <---------ICU4             --------->AGP1                <--------ATHB1             <---------ARR11(3)                --------->YAB1             --------->ARR14(2)                -------->HAHB4            <---------GLK1(1)               --------->ICU4            ----------->ARR10               <---------ATHB51      --------->YAB1            <---------AHL20(2)       <---------ICU4            --------->AHL20(2)      --------->ICU4           --------->ICU4           <---------ATHB12  ----------->GT1           <---------YAB1         --------->WOX13(1)  <------MYB83        --------->ICU4          ------------>CBF      <------MYB46(1)     ----------->GT1         <----------DOF2<------ZmHOX2a(2)     <---------ZAT6        --------->At4g35610  <---------MYB52(1)               <-----------GT1 -->HSFB2a(2)--------->YAB1<---------At4g35610----------->GT1     <---------ANAC46               ----   aactatagagataattaataattcttatcagcttttcaatcatgagatctgttatttggtttatagtttcttatactctcatgttactcgttctgagagg  15786400                                        ----------->GT1                                  <---------MYB59                                 --------->ANAC58          --------->ARR11(3)     --------->ANAC58                                                  <-    ----------->GT1              --------->ANAC55(2) --------->ARR11(3)                         <----   <---------TOE1(3)             --------->ANAC46    <---------ARR11(3)     <---------YAB1    <------   <---------TOE2(3)            ------->TEIL   --------->YAB1      <---------HSFB2a(1)        ------- ---------->DOF2           <---------AtLEC2   <---------AHL20(2)   --------->HSFB2a(1)--------->MYB52(1) ----->ALFIN1       ----------------------->TaNAC69(2)--------->CCA1(2) <----------DOF2    --------->ALFIN1   tggtaaaggtaatatgttgagttttttttgtatggacgtaactcgtatataataagatataaaacaaggatgttctttctaattgcaaaaacggtgttgt  15786500   <---------TOE2(3)           <---------DOF5.7(2)                                            <------ ---------->DOF2             --------->DOF5.7(2) <---------ZAT14                              <------ --------YAB1               --------->TOE1(3)    --------->ZAT14                             <------- -----YAB1            <-----------GT1            --------->ZAT18             <---------AHL20(2) ---ANAC46         ----------->GT1    ----------->GT1                       <---------YAB1   -------- ---->GT1   ---------->DOF2 --------->TOE2(3)    <---------ZAT18 <---------YAB1              <-------   gattaaaggaaataaaaagcattgttacaacgttaacatatggtttaatagtgaacttatttggattgtcatttgtttattaatcgaactaaaattaacg  15786600                                                             <---------ZAT14                                                             --------->REM1(2)                        <-------GAMYB                        --------->ZAT14                       <---------MYB46(3)              --------->GLK1(2) ---TOE2(3)           <---------AtMYB61         --------->At4g35610                  --------->At5g28300 ---TOE1(3)         <-----------RAV1(1)         --------->ZAT2                      ----------->GT1 --DOF5.7(2)        <---------ANAC58            <---------At4g35610      <------ZmHOX2a(1)<---------REM1(1) ->MYB52(1)         <---------ANAC58            <---------ZAT2     <XXXXXXXXXXXXXXXXXXXXMIR776 ----GT1            <---------ANAC46       --------->ALFIN1  <---------ZAT18      <---------ORA47(1)   tttttttttttttttttggtttgtgtggttgagaaaacaatagaagtggaagctgagaaactgtgtacaacgataggagacttggacggtaaatgtagcc  15786700                                                                 ----------->GT1                                                                ------->MYC3                                                                <-------MYC3                                                                <-------MYC2                                       >>>>>>>>>RAP2.2          ------->MYC2                              <---------WOX13(1)         --------->ZAT2 <---------TOE2(3)                         --------->ANAC55(2)             --------->At4g35610                        -                <---------AtLEC2       --------->TOE2(3) <---------ZAT2<-----------GT1              <        --------->DAG2   <---------ANAC55(2)   --------->DAG2   <-------MYC4                       --       ---------->DOF2  <-------TEIL--------->WOX13(1)   <---------At4g35610                      <--  ----------->GT1      --------->CCA1(2)      ---------->DOF2<---------ALFIN1    <---------YAB1   ---   aagacggagaaaagttgtgcatgagatacatgactgatcaatctaaaaaaaagtttcttagctgcacatgtaataacgttgttatgttacacaagtacaa  15786800  Previous    Next  AGI:  At4g32717.1    Description:  SCRL24 (SCR-Like 24). Identical to Uncharacterized protein SCRL24 precursor (SCRL24) [Arabidopsis Thaliana] (GB:P82643); similar to SCRL25 (SCR-Like 25) [Arabidopsis thaliana] (TAIR:AT4G32714.1); contains InterPro domain Plant self-incompatibility response; (InterPro:IPR010682) Range:  from: 15786342    to: 15786846    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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