Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                             ------>ZmHOX2a(1)                                                                                             ========                                                                                             ========                                                                                           ==========                                                                                           ==========                                                                                           ------>ZmHOX2a(2)                                                                                          ===========                                                                                          ===========                                                                                          <------ZmHOX2a(2)                                                             ----------->HVH21           <---------GLK1(2)                                                            ------>ZmHOX2a(2)            <---------ARR14(2)                                                           --------->At4g35610           --------->AGP1                                                           <---------At4g35610           --------->ARR14(2)                                                          <---------AGP1                 <---------ARR11(3)                                                  --------->ANAC58   --------->YAB1      --------->ARR11(3)                                       --------->ALFIN1 --------->WRKY12---------->DOF2----------->ARR10                                    --------->ALFIN1   <---------MYB52(1)            <------ZmHOX2a(2)                                   ================================HOX2a_HOX2a       ================           ---------->DOF2         <------ZmHOX2a(1)  <-------GAMYB <---------ZAT6   ===============HOX2a_HOX2a -----------HVH21          --------->GLK1(2)      --------->ANAC58----------->GT1   <-----------HVH21   aaggtcagactgggaaagggaagaagtagaatcggaaggaggtggagaaggaacgccgttgatctgaccagtgataaaggctaaacgatcagatcctcta  15765000                   <---------ANAC58                ------>ZmHOX2a(1)              ----------->RAV1(2)              <---------ZAT2              --------->ZAT2             ------>NtERF2            <---------ALFIN1          --------->LBD16          ------>NtERF2          <---------ATERF1(1)     ==================HOX2a_HOX2a     ------>ZmHOX2a(2)    --------->HSFB2a(1)    <---------HSFB2a(1)    ===================HOX2a_HOX2a    <------ZmHOX2a(2)   --------->ARR11(3)   --------->ARR14(2)   <---------ARR14(2)   <---------ARR11(3)   --------->ARR14(3)   <---------ARR14(3)   <-----------ARR10  <------ZmHOX2a(1)<---------ANAC58 ----CCA1(2)--------->DEAR3(1)                  <---------LBD16 ==========HOX2a_HOX2a                         --------->MYB52(1) ===========HOX2a_HOX2a             ------>NtERF2 --------->LBD16 ======================HOX2a_HOX2a --------->ANAC46                                             ----- ========HOX2a_HOX2a      <---------At4g35610 <---------ALFIN1                                  ----- ======================HOX2a_HOX2a --------->ANAC58        <---------ANAC58   ---------->DOF2  ------ ========HOX2a_HOX2a      --------->At4g35610----------->HVH21    <---------LBD16   <------ZmHOX2a(1) ========HOX2a_HOX2a<----------DOF2--------->ANAC58        <---------ANAC58 <------ZmHOX2a(1)  <-----   tctaggatcttccgcctcctggcttctctgctgttcgacgccattgcctcaccggaatatttcttgtcttcggagcgaggaaaagaggaaaccaattctc  15765100            --------->At4g35610            <---------ZAT2            --------->ZAT2       <---------At4g35610       <---------ZAT2       --------->ZAT2       --------->At4g35610     <---------WRKY12             <---------ARR14(2)                  <-----------HVH21           ---     <---------WRKY38(1)      <---------LBD16<---------ANAC55(2)      <-----------TGA1   <---------ANAC58   <-----------HVH21 <----------DOF2         --------->ANAC55(2)--------->ARR14(2)       <---------ANAC46 ------>HVH21        ------>ZmHOX2a(1)--------->AHL20(2)        <---------ARR14(2)       <---------ANAC58 ---->ETT(2)<---------At4g35610   --------->ARR14(2)       --------->ANAC58           ---------->ID1 --->HSFB2a(2)     *TSS  <XXXXXXXXXXXXXXXXXXXMIR866-3P     --------->ANAC58         <-----------RAV1(1) ----HSFB2a(2)    ---------->ID1--------->LBD16            --------->ANAC46 ---------->DOF2     -----   gacggggtcagctcagcttagtcctttttaaacgcggattttaaatcacttatttcttcaaacgcaaatcgtcgtcactaaagagtttgtcgcgtttaga  15765200                              --------->ZAT18             <---------WOX13(1)                    -----                            <---------ZAT18       ------>ZmHOX2a(1)                      <---------ICU4                 ------------>CBF   <---------ATHB12    --------->ATHB12     ---------->DOF2    <---- ------>ICU4  ------->GAMYB--------->ALFIN1      --------->TOE2(3)     ---------->DOF2--------->YAB1 ---->YAB1 --------->MYB52(1) <---------ZAT18 <---------ARR11(3)  <------ZmHOX2a(1) --------->GLK1(2)   ataatgggcttcttaacgggccaattcaagtgtgcccaattacttcaaaatcctaaattgattggataggaccaaaagtcaaagagaatcatcaagacaa  15765300                              ---------->DOF2                      <-------MYC2                      ------->MYC2                                               --------->ANAC58                      <-------MYC3                                         ----------->HVH21                      ------->MYC3                                       --------->ANAC58                     --------->At4g35610                                 --------->ANAC58                     <---------At4g35610                                 <---------O2                     <----------TaMYB80                                  --------->O2            <---                <---------ANAC55(2)                                      --------->ANAC46      ------                --------->ANAC55(2)                                    <---------ALFIN1       -------                --------->ANAC58                                      <---------REM1(2)       <------                --------->bZIP60(2)                                <---------ANAC58          --------                --------->ANAC46                                   <---------ANAC58          <------NtERF2                --------->ANAC58                      ---------->DOF2------>NtERF2          <--------  <----------DOF2   ---------->TaMYB80     <---------ZAT6      <-------GAMYB     --------->ANAC58---- ---->O2       <---------LBD16--------->DAG2     ----------->GT1 --------->WRKY38(1)       --------->RAP2.3(3) -----O2    <-----------HVH21---------->DOF2     XXXXXXXXXXXXXXXXXXX>MIR156H ------>NtERF2 --------->PCF2   gtgtctttagttttggtcacggcatatgccaaaaaggcccaactagtgtaatagaaaaaagagagcgttgcctccacgcgaccacgaccagagcccccac  15765400       *TSS   <----------DOF2 ------ALFIN1                   <---------GLK1(2) >NtERF2                   <---------ALFIN1 -->ANAC46                 ----------->RAV1(1) ---ALFIN1                --------->MYB46(3)           --------->ANAC58                  <-------TEIL ->MYB46(3)           --------->MYB46(3)             --------->CCA1(2)                --------->GLK1(1) -ATERF1(1)           <---------ATHB12              <----------ID1                    <---------At4g35610 ----->AtMYB61      --------->WOX13(1)   <---------ICU4--------->ANAC58               --------->At4g35610   cattcctttttaaaattcaattcaatcacccacagtttcttcatcactgcgagagagacgaaaaccagagagagagagagagagagggagatgcaatcgc  15765500                                    <----------CDC5                               <------ZmHOX2a(2)                           <------NtERF2                          ------>NtERF2                         --------->DEAR3(1)                         <---------ANAC46                         <---------DEAR3(1)      --------->DEAR3(1)                        --------->ATERF1(1)   --------->ANAC58                  <------MYB83                        <------NtERF2         --------->ANAC58                  <------MYB46(1)                       <---------RAP2.3(1)   --------->SPL7                 --------->ZAT2           <------NtERF2--------->RAP2.3(1)<---------SPL7                  --------->ANAC58        --      --------->DAG2  <---------DEAR3(1)  <---------ANAC58                 --------->ANAC58   -------    --------->CCA1(2)<---------At4g35610  <---------ANAC58             <---------HSFB2a(2)   <-------TEIL   tgcaagataaggcatcggtgttaagcggcgtcgatcaggctgaggcgttcgccatcgacgagtccaatctgttcgacaagcttggtcttcagacattcat  15765600     --------->MYB46(3)   ------>MYB46(1)                                                                                  <   <---------ARR14(2)                                                                               <   ------>MYB83                                                                               -------   --------->ARR14(2)                       --------->ALFIN1                               <---------AHL20(2) --------->AtMYB61               <---------ZAT18                                           --------->AHL20(2) ----->TEIL                      --------->ZAT18       <---------YAB1      <---------At4g35610------- -->YAB1        <---------------AGL15   --------->ZAT14<---------AHL20(2)  --------->At4g35610<------   caacctatccaccaatttctataccaggtattgtgttcgctctggagtctgggttatattatagctctcacttgctaagctccatttttcgattaaaatc  15765700                   <-------GAMYB                  <---------MYB46(3)          <------ZmHOX2a(1)              <---------ICU4 ---------ANAC46 <---------YAB1        <---------YAB1 ---------REM1(1)<---------TOE2(3)    --------->YAB1                                              <-- -->ARR11(3)  --------->GLK1(2)    <----------DOF2                                   <------ZmHOX2a(1) -->GLK1(2)  <---------ARR11(3)   --------->TOE2(3)                    <---------ANAC58           <-- ---ARR14(2) --------->ARR11(3) ------->TEIL        --------->GLK1(2)  <---------ANAC58    <---------TOE2(3)   tggtgtagactaggagattttggttgaaagtgtgaacctttaatattgatgaagaatcaattccagtctctctgcttgttcaaatgaggaattgagataa  15765800               <---------ANAC58          <---------ICU4         <---------YAB1              <---------ZAT6       --------->YAB1                ----------->GT1      <---------YAB1         --------->CCA1(2)     <---------TOE1(2)      --------->ARR14(2) --------->CCA1(2)     --------->ANAC58    ------>ZmHOX2a(1)       <---------ARR14(2)--------->ARR11(3)     --------->ANAC58 --------DOF2  <---------ANAC46  ---------->DOF2           <---------YAB1 -------DAG2   <---------ANAC58<---------YAB1 <---------ARR11(3)----------->HVH21  ------>ZmHOX2a(1)   cttttcctatgataatggcttggaattgcagatatgaaagtgttataagatatactagtttctgatttgacaagtctcttaagtccttcttacctagaca  15765900  Previous    Next  AGI:  At4g32680.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO44139.1) Range:  from: 15763242    to: 15765119    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g32690.1    Description:  GLB3 (2-on-2 hemoglobin like gene 3). similar to unknown [Populus trichocarpa] (GB:ABK93025.1); contains InterPro domain Globin-like (InterPro:IPR009050); contains InterPro domain Globin, truncated bacterial-like; (InterPro:IPR001486); contains InterPro domain Globin; (InterPro:IPR012292) Range:  from: 15765407    to: 15767111    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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