Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               <---------LBD16                              --------->ANAC58                                   <---------HSFB2a(2)                        --------->ZAT14                                   <---------LBD16                            <---------ZAT14                                   --------->HSFB2a(2)                    <---------ARR14(2)                              <---------ANAC58                            --------->ARR14(2)                              <---------ANAC58 --------->LBD16            <-----------ARR10   -------      <---------ANAC58        --------->HSFB2a(1)                        <---------CCA1(2)--------->ANAC58      <---------ANAC58        <---------HSFB2a(1)               <-------TEIL <<<<<<<<<<<<<<<<<LFY ------ATHB12           <---------LBD16 <---------KAN4(2)    --------->At4g35610  --------->ALFIN1   tcaagaattcgtgccatggtagtctctctggagcgttctcggaataaaccggaacaattgagtagctacgtttgcaaatctacagtgggaacaagaaaaa  15762500                      ------>ZmHOX2a(1)                           --------->TOE2(3)               --------->ARR11(3)         <------ZmHOX2a(1)       --------->TOE1(3)      <----------DOF2--------->TOE2(3)   ----------->GT1   ----------->GT1         --------->At4g35610 --->DOF2      <---------ARR11(3)   ---------->DOF2   ---------->DOF2              <---------At4g35610   gagagaaactttagagacatcttcctcaaatcacatagaaaagaggaaatttttgaaaaagaagtaaactttaaactcaattcgtagcagaaacagagtt  15762600                                   <---------DOF5.7(2)                                  <---------ARR14(2)                                  --------->ARR14(2)                                               --                                 --------->DOF5.7(2)                                              ---                                <----------DOF2                                                   ---                               <---------ANAC46                                                  <---                               <---------ANAC58                                                  ----                               <---------ANAC58                                                  <---                          --------->ATHB12                                                       ----                          <---------MYB46(3)                              <---------GLK1(1)     -----                    --------->ANAC58             <-----------RAV1(2)      --------->CCA1(2)     -----         ----------->GT1 <---------ATHB12 <-------GAMYB                  <---------ARR14(2)     -----        ----------->GT1  --------->ICU4  <---------MYB46(3)    --------->GLK1(2)              <------    --------->DAG2  --------->ANAC58<---------At5g28300 ---------->DOF2  --------->ARR14(2)  <-------   ---------->DOF2  --------->ANAC46<---------LBD16   <------ZmHOX2a(1)----------->GT1       --------   tttgaaaaaggggtttaaaacctcgcaatggttgcgtttacggcgattgagccagaggaaaagacaatctgagtggatatacttgagagagcctctacac  15762700  --------->ANAC58  --------->ANAC58 ------->ZAT18                               --------->GLK1(2) ------>ANAC58                               --------->ARR14(2) ------>ANAC58                               <---------ARR14(2) ----MYC3                             <---------WOX13(1) --->MYC3                           --------->MYB55(2) ----MYC2                        --------->LBD16 ----------->RAV1(1) --->MYC2                      <---------LBD16  <---------ETT(1) ---->ANAC46              --------->ARR14(2)--------->GLK1(1) ---->ANAC58              <---------ARR14(2)<---------GLK1(1) ---->ANAC58     <---------GLK1(2)<---------MYB52(1) ---ALFIN1       <---------ARR14(2) <---------MYB46(3)    --------->ETT(2) --REM1(2)       --------->ARR14(2) --------->ATHB12      <---------ETT(2) ->ZAT14    --------->MYB52(1)------>ZmHOX2a(1) <----------ID1   <----------DOF2                  <--   gcgcacggatgtctcaacggattgtctggttcctccggtgattggcaaatccgacaaatgtctacagctttgttatttatgtctgatacttcttctgtag  15762800                                                     --------->LBD16              --------->DEAR3(2)                     --------->HSFB2a(2)              --------->ATERF1(1)                    <---------HSFB2a(2)              --------->MYB46(3)                    <---------ANAC46           --------->ATERF1(1)                      --------->HSFB2a(2)           <------NtERF2                     ----------------->AGL1          --------->LBD16               <---------GLK1(1)         --------->TOE2(3)          <---------ATERF1(1)           --------->GLK1(1)         --------->TOE1(2)         --------->DEAR3(1)         <------NtERF2   <---------LBD16        <---------LBD16            --------->LBD16 <---------LBD16--------->TOE2(2)   <---------GLK1(2)             <---------LBD16 <---------ARR14(2)                         <--------  --------->ZAT2--------->MYB52(1)--------->DEAR3(1)<---------HSFB2a(2)            ------->TEIL  --------->At4g35610           --------->LBD16  --------->ARR14(2)               <---------CCA1(2)-- ---------GT1------>NtERF2      ------>NtERF2<-----------------AGL1       --------------------->WRI1   taacagcttcgccggagccaacgagtttgtcttccgccggagaaatctccatttccgggaactagaaaccttggaacttcgattgtatctctctctttct  15762900                    --------->At4g35610                    <---------At4g35610                <----------DOF2                             ----------->GT1      --------->ZAT14                            <----------ID1              --------->YAB1      --------->ZAT18  <------NtERF2             ----------->GT1     <---------YAB1   <----------ID1      <---------ZAT18  --------->At5g28300     ---------->DOF2    --------->AHL20(2)  ----------->GT1      <---------ZAT14 --------->RAP2.6(2)  ----------------->AGL1 <---------AHL20(2)---------->DOF2 --DOF2   <----------DOF2        --------->AHL20(2)        --------->DAG2 --------->YAB1            < ------->ZAT14  <---------DAG2*TSS        ------>NtERF2   ---------->DOF2<---------AHL20(2)     -----   cttcagtctgcactttcactttagcggcaaatgaaaaaaatggctgccaaaaagaaaaaaaaaagtaatttataaataatcaaaaaaaaagaaaaaaaaa  15763000                                        <----------DOF2                            <---------ANAC58                            >>>>>>>>>>HY5                                       <---------ANAC58                            <---------ANAC55(2)                                 <---------ANAC58                            --------->ANAC55(2)                            <---------ANAC58                            <---------ANAC46                               <---------ANAC58                            <---------ANAC58                           <---------ANAC58                            <---------ANAC55(1)                        <---------ANAC58        --------->TOE2(3) <---------TGA2(2)              ----------->RAV1(1) <---------MYB52(1)     --------->MYB52(1)  ----------->HVH21             --------->At4g35610<---------TOE2(3)   --------->MYB46(3)   --------->SPL7 --------->TOE2(3)----------->HVH21 <---------TOE1(2)   <---------MYB52(2) <---------SPL7<-----------GT1>>>>>>>>>WRKY18  <----------DOF2 ----------ID1--------->ATHB12 ------->TEIL       ----------->HVH21--------->HSFB2a(1) ----->DOF2  <---------YAB1----------->STF1 ---------->ID1         <---------HSFB2a(1)          -----   aagaaacaaacgtttatgattcgtcgtatgacgtatttttacctttgtttttttgacagcgacagagggactttcttacgttgcttccctaatttctcgg  15763100                                                                      --------->AtMYB61                                      <----------DOF2                 --------->TOE2(3)         ----------->HVH21  <---------AHL20(2)                        <---------DAG2       <---------ANAC58     <-----------GT1                           --------->TOE1(3)       <---------ANAC58 <---------AHL20(2)                <---------ZAT14                      ------ <---------AHL20(1)     --------->AHL20(2)                --------->ZAT18               <-----------HVH21 --------->AHL20(1)    --------->AHL20(2)                 --------->ZAT14   <----------DOF2    <----- --------->AHL20(2)    <---------AHL20(2)          --------->ZAT14 <---------ALFIN1    <----------DOF2 <---------AHL20(2)    --------->AHL20(1)   <----------DOF2   <----------DOF2    <----------DOF2<---- ---->At5g28300        <---------AHL20(1) ---------->ID1  <---------ZAT18   <---------DAG2    -------   taatttattgtgtgacagccaaaaatttatttacttcttcctttgtctttctcttcagtctgcactttcccaccttaacttttcttttcctttcagagat  15763200                                                                                                    -                                                                                    <---------AHL20(2)                                                                                   <---------AHL20(2)     --------->TOE2(3)                              --------->TOE2(3)       <----------DOF2         <   --------->ARR11(3)                               <----------DOF2        --------->TOE2(3)        <   <---------ARR11(3)                               --------->TOE1(3)    --------->GLK1(2)          <  <---------GLK1(2)       --------->ANAC46    <---------ICU4<---------AHL20(2)     --------->AHL20(2) --->ARR11(3)     --------->AHL20(2)          --------->YAB1--------->AHL20(1)     <---------AHL20(1) ----ARR11(3) --------->ANAC58               <---------ATHB12        <------ZmHOX2a(1)              < --ZmHOX2a(2) --------->ANAC58               --------->ICU4 --------->AHL20(2)     --------->AHL20(1) -->GLK1(1)   ----------->GT1                <---------YAB1--------->AHL20(2) --------->AHL20(2)  ---   cacaaaatctcaaaacaagaaaaaatacaccctaattcagtgatgcaatgataactttaaaaaaaattggaggagaacctttaaatttattcttccaaac  15763300                                                                     --------->ICU4                                                                  --------->AHL20(2)                                                                --------->ANAC55(2)           --------->YAB1                             --------->ARR11(3)          <---------ATHB12                            <---------ARR11(3)   --------->MYB46(3)           ---------->DOF2      --------->CCA1(1)                             --  ------>MYB46(1)           <---------ANAC55(2)      --------->RVE1(1)            <---------MYB59  <-  ------>MYB83              --------->ANAC58         <---------RVE1(1)       --------->HSFB2a(2)   -- -------->MYB46(3)          --------->ANAC46         <---------GLK1(1)       <---------HSFB2a(2) <--- ---------MYB111(1)         --------->ANAC58         --------->GLK1(1)  <---------YAB1    --------->YAB1 ---------MYB59      ------>ZmHOX2a(2)              <---------ARR11(3)--------->YAB1     <---------YAB1 ---------MYB46(2) <---------ARR11(3)     ---------->DOF2       <---------ANAC55(2)    --------->YAB1 ---------MYB111(2)--------->ARR11(3)---------->DOF2--------->ARR11(3)<---------ICU4--------->MYB52(1) ----->P  --------->AHL20(2)--------->ANAC55(1) ---------->DOF2 ----------->GT1   <---------MYB52(2)<   taccaaacaccaataaatattgatcttctcacgcaaaagaaaaggaaagagaaagatatctgaaacatgtaattatgttttggaactaactataatttta  15763400  Previous    Next  AGI:  At4g32670.1    Description:  protein binding / zinc ion binding. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G34100.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO47840.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841); contains InterPro domain Zinc finger, variant RING-type; (InterPro:IPR011016) Range:  from: 15759248    to: 15762930    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g32680.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO44139.1) Range:  from: 15763242    to: 15765119    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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