Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   --------->YAB1            <----------DOF2                                                --------->ANAC58        <-------TEIL      <---------MYB52(1)                               --------->AtLEC2       --------->CCA1(2)<-----------------AGL3                             --------->ANAC58         -      <---------ARR14(2)----------------->AGL3                           <---------ANAC58   ---------      --------->ARR14(2)----------------->AGL2                           <---------ANAC58   --------- ------->HVH21        ---------->ID1  ------>ZmHOX2a(1)<-------TEIL     <-------TEIL      ---------->DOF2   tgaagggggatacactttgtcttcgtcccttaattagctcctatgaagaatttcacatacacaaattaagaagatgcatgcaataacaaggctaaagcca  15755700                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                           <-------TEIL                                               --------->AHL20(1)                   <---------MYB46(3)                                               <---------AHL20(2)                  <---------WOX13(1)                                               --------->AHL20(2)                 <---------ANAC58                                              --------->AHL20(2)                  <---------ANAC58 -------->TOE2(3)                      <<<<<<<<<MYB98         --------->ICU4     --------->ATHB12 >ANAC58              --------->DAG2  ----------->GT1   ------->TEIL            <---------YAB1 >ANAC58             ---------->DOF2------->TEIL     <---------ANAC46     <-----------RAV1(1)--------   tttcttaatagttcatttgtacataaagtaagtttgtgtatgttaaaaaaaaattgtgtatgtactgatgtacagtatgttgttgattgttgatacgtaa  15755800                                                                     ----------->GT1     ----------->GT1                                           <---------ICU4  ------>MYB83                                              <---------ICU4  ------>MYB46(1)                                          <---------YAB1                      <----- >ANAC58                         <---------ANAC58        --------->YAB1                      <------- >ANAC55(2)                      <---------ANAC58    ---------->DOF2<---------ANAC46         -------- >ANAC55(1)                  <---------MYB52(1)    --------->ANAC58 --------->ANAC55(2)     <-------- >ANAC58                   <---------ANAC58        --------->ANAC58 <---------ANAC55(2)   --------->WOX13(1) -ANAC55(2)                <---------ANAC58    <------ZmHOX2a(1)   <---------LBD16--------->ANAC58 -->GT1<<<<<<<<<<WRKY63   <---------TOE2(3)  --------->MYB59--------->ATHB51      --------->ANAC46 ->TOE2(3)               <-----------GT1--------->AHL20(2) --------->ICU4         --------->ANAC58   aaccaaatagtcaaatactatacatttttacgtttgctcgtataaattaggaaacgaaagcataattgttacggataaaaaaacacgaaaatcaattaat  15755900                                --------->HSFB2a(2)                                <---------HSFB2a(2)                                <---------TOE2(3)                           --------->ANAC46 ----TOE2(3)                 <---------YAB1                                 --------->ANAC58 --AHL20(2)       ---------->DOF2                                           --------->ANAC58------->TEIL ->AHL20(2) ----------->GT1 <---------AHL20(2)                      --------->AHL20(2)     --------->MYB52(1) -ATHB12 <----------DOF2    --------->AHL20(2)               <---------TOE2(3)           <---------MYB52(2)   gaaacaaaacccttttgtaaaaaagcccatttttatggaagcccattttgagatggaccagttaatgaaaaaaaatccaagaaacaatgaaacgaacgtt  15756000                                       ------>ZmHOX2a(2)                      <---------LBD16                                     --------->ARR11(3)                  <---------HSFB2a(1)                                     --------->ARR14(2)                  --------->HSFB2a(1)                                     <-----------ARR10             <---------------------WRI1       --------->ATHB12              <---------AGP1              <---------MYB46(3)      --------->ICU4                 --------->ARR14(3)          <---------DEAR3(1)      --------->REM1(2)   <-------TEIL>>>>>>>>>SARD1        <---------ARR14(2)         --------->ALFIN1      ------>ZmHOX2a(2)  <------ZmHOX2a(2)                  <---------ARR14(3)       --------->ALFIN1<---------ANAC55(1)  --------->CCA1(2)                  <---------ARR11(3)       <---------ZAT2  <---------ANAC58 --------->ARR11(3)            --------->YAB1                <---------MYB46(3)   ----------->HVH21 <---------ARR11(3)        <---------YAB1                    <------NtERF2    <---------ANAC46      - --------->ARR14(2)       <---------ARR11(3)                <-----------RAV1(2)--------->LBD16 <----- --------->AGP1>>>>>>>>>CBP60g<---------YAB1<---------ALFIN1<---------ANAC46  <---------ANAC58 ------ <---------ARR14(2)     --------->ICU4<------ZmHOX2a(2)    <---------LBD16   <---------LBD16  -------   taagatccatgatggaaatttgggccaagattataagaagatctcaccacatttcatttgggccgggtgggcgaaacattccgggtgatcgtgtagaccc  15756100                                                                                <---------ICU4                                                   --------->SPL7               -------->ATHB1                                                  --------->ARR14(2)            --------->ATHB51                                                  <---------ARR14(2)            --------->ATHB12                                                 <---------SPL7                --------->AHL20(1)                                                <---------MYB46(3)             <---------YAB1                                            <------NtERF2                      <---------AHL20(2)                                          <---------bZIP60(1)                  <---------ATHB51                                          --------->bZIP60(1)            --------->At5g28300                                          <---------ANAC58              ----------->GT1      <---------ANAC46              <---------MYB46(3)                <---------ANAC46 -------->AHL20(2)    --------->AHL20(2)  <---------ANAC58 --------->MYB52(1)  --------->ICU4 ----MYB59      --------->ZAT18  *TSS     <---------bZIP60(2)         <---------ORA47(1) ------>CBF    ----------->GT1<------------CBF <------NtERF2    <---------ARR14(2)            <------ -->ANAC46 ---------->DOF2 ------------>CBF --------->ATERF1(1) --------->ARR14(2)      <-------GAMYB   aattttttcggtggaaagtgcaaaaaaaatgcaattggtggatgtcgtcgcggttcgaccccaagggatttggccggtaaaattattgggagttgtcttt  15756200                                                                                   <------NtERF2                                                                                  ------>NtERF2                                                                                 --------->RAP2.3(2)                                                                                 --------->DEAR3(1)                                                                                 --------->RAP2.6(2)                                                                                 --------->RAP2.3(3)                                                                                --------->ERF1                                                                                --------->ATERF1(1)                                                                                --------->RAP2.3(1)                                                                                --------->ORA47(2)                                                                                --------->DEAR4(2)                                                                           --------->ARR14(2)                                                                           <---------ARR14(2)                                   ------>ZmHOX2a(1)                       <---------GLK1(2)                               <---------ARR14(2)                        --------->LBD16                               --------->ARR14(2)                <---------DAG2<---------ATERF1(1)  <---------ZAT18         --------->ANAC58         <---------LBD16      --------->LBD16 <---------YAB1 ----DOF2                 --------->ANAC58 <-----------GT1    <-----------GT1  <---------RAP2.3(1)  -   ctcttgcactctctctagttccaaaccctagcaattcctctgttttcaccattttcggagattatcaccttctccccgattcgccgccttgtgattacat  15756300                                                                        <---------DEAR3(1)                                                                      <-----------HVH21                                                                     <-----------RAV1(1)     <-------                                                          <---------ANAC58             <---------ANAC58                                                      <---------ARR14(2)<---------At1g77200 <--------                                                      <---------GLK1(2) <---------ANAC46 --------->ANAC46                         <-----------GT1              --------->ARR14(2)<---------DREB2C(2)<------NtERF2             <---------HSFB2a(2)            <---------WOX13(1)       --------->ALFIN1  <---------ANAC58             --------->HSFB2a(2)           <---------ARR14(2)  --------->HSFB2a(2)   <---------At5g28300            <---------ANAC46               <---------GLK1(2)<---------MYB52(1) ------>ZmHOX2a(2)  <--          --------->GLK1(2)         --------->At4g35610   <---------ANAC58 ----------->HVH21<--------          --------->ARR14(2)        <---------At4g35610--------->GLK1(2)<---------DEAR4(1)<----------          <---------ARR14(2)   <----------DOF2       --------->At4g35610--------->ETT(1)--------->LBD16   ---------->DOF2      <-----------GT1    --------->ARR14(2)  <---------HSFB2a(2)  <-----------GT1 -------->ANAC46<--------P  --------------->AGL15 <---------At4g35610----------->HVH21<---------LBD16   ctacgtaaagagtttctggtagaaattttccctcttttagctgcagattggcatcagattccgttctggatgtgtcggtgatcgattttccgcgtcggtg  15756400                                                                           ----------->RAV1(2)                                                                           --------->ZAT2                                                                           <---------ZAT2                                                                           <---------At4g35610                                                           --------->TOE1(2)                                                           <---------LBD16 --------->At4g35610      <---------DOF5.7(2)                              ----------->HVH21 <---------ALFIN1      --------->MYB52(1)                              <---------TOE1(2)  <-----------RAV1(2)     ----------->HVH21                             --------->TOE1(1)    <------NtERF2    <---------MYB52(2)                             --------->TOE2(1)  --------->PCF5   <---------At4g35610                            ------>ZmHOX2a(1)   --------->PCF2   --------->At4g35610                      --------->HSFC1(2)       ------>NtERF2 --DEAR3(2)                                 <---------HSFC1(2)   <---------bZIP60(2) -DEAR3(1) <---------GLK1(2)             <------ZmHOX2a(1)----------->RAV1(2)                    <--- -------YAB1               ---------->DOF2--------->ARR14(2)  ----------->HVH21                ------ -At1g77200--------->ARR14(2)         <-----------RAV1(2) <---------bZIP60(2)         <---------MYB46(3) -HVH21    <---------ARR14(2)       <-----------HVH21 --------->SPL7<---------ATERF1(1) <--------P   atgatagctaacggattcgagagtatggataaagaacgagtcaggaaacgtcctcgtatgacctgggacgaggccccagctgaaccagaggttgctcctc  15756500          <----------DOF2  ----------->HVH21                                                      <--     <<<<<<<<<TBF1  --------->AHL20(2)                                                          -----  <<<<<<<<<TBF1     <---------AHL20(2)                       --------->ALFIN1            <----------DOF2 -------DOF2    <---------AHL20(2)               <---------TOE1(3) ---------->DOF2<---------TOE2(3)-- >ZmHOX2a(1)    --------->AHL20(2)               <---------TOE2(3)<------ZmHOX2a(1)<---------YAB1 ---   tttcttcttcttctttttttaattaatctttgacatttagaacttcgaattagggtttagaatgtggaggaaagaccgagcatttatgtttctttggtga  15756600  Previous    Next  AGI:  At4g32660.1    Description:  AME3; kinase. Identical to Serine/threonine-protein kinase AFC3 (AFC3) [Arabidopsis Thaliana] (GB:P51568;GB:Q39185); similar to AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1), kinase [Arabidopsis thaliana] (TAIR:AT3G53570.2); similar to AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1), kinase [Arabidopsis thaliana] (TAIR:AT3G53570.1); similar to AFC1 (ARABIDOPSIS FUS3-COMPLEMENTING GENE 1), kinase [Arabidopsis thaliana] (TAIR:AT3G53570.4); similar to Os01g0590900 [Oryza sativa (japonica cultivar-group)] (GB:NP_001043452.1); similar to putative protein kinase PK12 [Oryza sativa (japonica cultivar-group)] (GB:BAD52695.1); contains InterPro domain Se Range:  from: 15756133    to: 15759319    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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