Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->AHL20(2)                                <---------AHL20(2)                               --------->AHL20(2)                               <---------AHL20(2)                    <--------HAHB4                    --------->ATHB12          <---------TOE2(3)  --------->TOE2(3)                        ----------->GT1        <---------AHL20(2)  <--------HAHB4                        <---------GLK1(1)        --------->AHL20(2)  <---------ICU4                     <---------YAB1       <---------AHL20(2) <---------YAB1    <---------ATHB12<---------AHL20(2)    --------->DAG2            --------->AHL20(2) ->GT1 --------->AHL20(2)  <---------YAB1               ---------->DOF2      <-----------GT1---------   aatatgaaaattaatgaacgaatcatttgatcattaatttatggactaatagaaacagaaaagttatgaaatctgtaaatcactatttattgtttgataa  15754500                                                                   <---------YAB1                                                                <XXXXXXXXXXXXXXXXXXXXMIR839--------->YAB1                           <---------ZAT6            ---------->DOF2                      <---------YAB1 >YAB1         <---------MYB52(1)    ------->TEIL  <------ZmHOX2a(2)                 <------ZmHOX2a(1)   ccaaaaaacatttcttcgttgtttagttagtgagaaatgaacctgtaacgacgatcaaagtgaagaacgatgaaaggtttggaagaaggattatcatctt  15754600                                                                                 --------->ZAT18                                                                                 --------->ZAT14                                          <---------MYB52(1)                     <---------ZAT14                                        <---------bZIP60(1)                 <---------ZAT14                               --------->ANAC58                             --------->ZAT14         <                               --------->ANAC46                   <---------ARR11(3)               <-                               --------->ANAC58                   <---------ARR14(2)               <-                              --------->HSFB2a(2)  ========================HOX2a_HOX2a             --                     --------->ANAC58   --------->bZIP60(1)       --------->ARR14(2)               --                     --------->ANAC58  <---------TOE2(3)          --------->ARR11(3)           ------                 --------->ANAC58    ----------->TGA1     <----------DOF2<---------At4g35610---------           ---------->DOF2    <---------HSFB2a(2)  ------>ZmHOX2a(1)------>ZmHOX2a(2)     --------->DOF5.7(2)  ---------->DOF2--------->ANAC58   <---------MYB52(2)<---------CCA1(2)  --------->At4g35610<--------   cgatgaaagtcccaaaagcaggcaagagactgctcgaaactgacgttatgttcctcacatctttgctcgatcttcttctgaactgcagtatcgataacgg  15754700                <---------ATERF1(1)               <---------ETT(2)               --------->DEAR3(1)               --------->ETT(2)               ----------->HVH21               --------->WRKY12               <---------DEAR3(1)              --------->ATERF1(1)              <------NtERF2             <---------ATERF1(1)             <-----------HVH21             ------>NtERF2            --------->DEAR3(1)            --------->RAP2.3(3)            --------->RAP2.3(2)------>NtERF2           --------->RAP2.3(1) <-----------HVH21     <---------ANAC58         --------->DEAR3(1)     <---------ANAC58    <---------DOF5.7(2)                           --------->ARR11(3) ------>ZmHOX2a(2)  <------NtERF2            ===================================HOX2a_HOX2a ------ZmHOX2a(2)  ------>NtERF2<------NtERF2------>ZmHOX2a(1)         <---------ARR11(3) --------ARR14(2) --------->DEAR3(1)  <---------ARR14(3)            --------->At5g28300 --------ARR11(3) <---------DEAR3(1)  --------->ARR11(3)           ------->GAMYB ------->ARR11(3) --------->ANAC46    <---------ARR11(3)        --------->MYB52(1) ------->ARR14(2)--------->ATERF1(1)  --------->ARR14(3)     ------->GAMYB ->GAMYB  ------>NtERF2--------->DOF5.7(2)------>MYB83    --------->MYB52(1) >MYB52(1)--------->LBD16---------->DOF2  ------>MYB46(1)--------->MYB46(3)              <------NtERF2 -DOF5.7(2)--------->ATERF1(1)<---------ANAC46        --------->MYB46(3) ------>ZmHOX2a(2)<---------ANAC46   cgatcttgcttccgccgtcgacgccgataacgccgtcgaagaccttcctcttctcaacaacaacggcaacggtgatctcgcctcagtagtcgtcgtagac  15754800             <<<<<<<<<TBF1                                                                          <      ---------->ID1                              *TSS             <----------DOF2                  -     <-----------GT1                              XXXXXXXXXXXXXXXXXXXX>MIR773   <----------DOF2     <  <------------------------ANAC81               <-----------GT1---------->ID1  <---------DAG2       - <----------DOF2<<<<<<<<<TBF1            <---------YAB1   <----------DOF2   <-----------GT1        --   attcttttttccttcttcttcttctctctcttcttcaagcttgatgatatatacttccctcttttgtctctttcatttataccttttttttttagttttg  15754900           --------->ALFIN1    ---------->DOF2  <---------YAB1 --------HAHB4 ------->ATHB1                                      <----------DOF2 ---------ICU4                  <---------MYB46(3)  <---------DAG2                              ----- -------->ATHB51               --------->ALFIN1 --------->WRKY12                      <---------AHL20(2) ------->ICU4    <---------At4g35610 <---------At4g35610     <-----------GT1        <---------AHL20(2)   aattattaaagaggtgtttagatgatcaagaaggtggtgagcaaattaagttgacttttttttttactggtttttgttttccctatattttttggaaaaa  15755000                                                          <---------YAB1                                                <---------YAB1                                          <---------AHL20(1)                                          <---------AHL20(2)                                          --------->AHL20(2)                                          --------->AHL20(1)                                  ------->GAMYB--------->AHL20(1)                                 --------->MYB46(3)   <-----------GT1                               <-----------GT1 <---------AHL20(1)              <-----------GT1    <--                            <---------ANAC55(2)--------->AHL20(2)          ------->TEIL  <---------AHL20(1)                            --------->ANAC55(2)<---------AHL20(2)       <---------YAB1   --------->ARR11(3)     <-----------GT1      <-----------GT1--------->AHL20(2)           --------->YAB1  --------->AHL20(2) ----->DOF2               <---------AHL20(2)  --------->YAB1         <---------YAB1 <----------DOF2   aagaatataacaatactataaaacaaatttacttaaccatctaataaattataatttttcaagattgtagtatgatgaattttactctttatatattcaa  15755100                                                                                      --------->ATHB12                                                                                      <---------ICU4                                                                                     --------->ICU4                                                                                 --------->ZAT14                                                                                 <---------ZAT14                                                                                --------->ALFIN1                                                                                <---------REM1(1)                                                                              --------->At4g35610   -                                                         <---------ANAC46   <-----------RAV1(2)     <                                                 <---------ANAC55(2)     <---------bZIP60(1)       --                                                 <---------ANAC58        --------->bZIP60(1)       <-                                                 --------->ANAC55(2)<-----------RAV1(1)            --                                                 --------->ANAC46   ====================RAV<---------YAB1  ---------->ID1               <---------DAG2    <---------ANAC58  <---------TOE2(3) <---------ZAT6-- --------DOF2                  <----------DOF2 <-----------GT1   <---------AHL20(2)----------->GT1 <-   ctttgttgttatatatgcagaaggcttcatcgacttttttgactcttatttacgtctctgtgtgtatttaatgtggcatcaggtgtagtgattacaatcg  15755200                                                                 --------->At4g35610                                                                 <---------At4g35610                                                            --------->ATHB51                                                            <--------ATHB1                                                            -------->HAHB4                                                            <--------HAHB4          <-----------RAV1(2)                               --------->ATHB12        <-----------HVH21                                   --------->YAB1 ------>ZmHOX2a(2)                                          <---------ICU4 -------->CCA1(2)                                          <---------YAB1 ------ZmHOX2a(2)                                          --------->ICU4 ------->AGP1                                         --------->ANAC55(2) --------ARR14(2)    ----------->GT1                  <---------ANAC55(2)                        <--- ------->ARR14(2)   <---------TOE2(3)                 ----------->GT1  --------->AHL20(2)      <----- ------->ARR11(3)   --------->DAG2              --------->AHL20(2)     <---------AHL20(2)<---------AHL20(2) --------ARR11(3)   <---------TOE1(3)       <---------YAB1 <---------ATHB51         ----------->GT1--   agatctacaatatcagggggataaggtttttttttttttttttcttacgataaattatgtaataattagctgtttaaatactggagttgaaaaaattgag  15755300                       <----------DOF2            <---------ARR14(2)           <---------CCA1(2)             <---------AHL20(2)    ---------->DOF2<---------O2         <---------AHL20(2)         <---------ZAT6        --------->YAB1 ---ZmHOX2a(1)<---------ICU4<-----------RAV1(1)     ----------->HVH21                   <---------ATHB51 ----TOE2(3)--------->ARR11(3)          --------->AHL20(2)<------ZmHOX2a(1)           --------->YAB1- ------->GLK1(1)   --------->O2     <---------YAB1 <-----------HVH21           --------->MYB52(1)  <-   gaactcaaaagtcaaatcttgacgtcttttttgttgttgttattaaatgagaccgtgacaggaatagtagtgttgaaaacaaaacgaacaataataaaca  15755400  Previous    Next  AGI:  At4g32650.1    Description:  ATKC1 (ARABIDOPSIS THALIANA K+ RECTIFYING CHANNEL 1); cyclic nucleotide binding / inward rectifier potassium channel. Identical to Potassium channel KAT3 (KAT3) [Arabidopsis Thaliana] (GB:P92960); similar to KAT1 (K+ ATPASE 1), cyclic nucleotide binding / inward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT5G46240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44136.1); similar to potassium channel [Daucus carota] (GB:CAB62555.1); similar to potassium channel NtKC1 [Nicotiana tabacum] (GB:BAD81035.1); contains InterPro domain RmlC-like jelly roll fold (InterPro:IPR014710); contains InterPro domain Cyclic nucleot Range:  from: 15751327    to: 15754850    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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