Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   <----------DOF2 --->GAMYB ---->MYB46(3) -----ATHB12 >MYB46(1) -->P<-----------GT1 >MYB83 <----------DOF2 -->MYB55(1) ->AtMYB61                     <-----------HVH21 ->DEAR3(1)            --------->ANAC58 ->MYB46(3)            --------->ANAC46                                           <---------At4g35610 --MYB111(1)           --------->ANAC58                                 <-----------GT1       ------- --MYB55(2)          <---------ALFIN1                               --------->HSFC1(2)   --------->At4g35610 --MYB111(2)        --------->ANAC46                         --------->ARR14(2)   --------->At4g35610 --MYB46(2)      <------ZmHOX2a(2)                         --------->LBD16        <---------ZAT2 >MYB46(3)   ------>ZmHOX2a(1)--------->ANAC46 <---------YAB1<---------ARR14(2)   --------->ZAT2   catcttttttctttcctcgatcaccacacaataagtcacagagtgttttctgataaaaacccagaaacgaagtttcacaatttcagctggaagatgaatc  15730000                                                                                     --------->ARR14(2)                                                                                     <---------ARR14(2)                                                                           <----------DOF2                                                                          ------>ZmHOX2a(2)                                                                        <---------ARR11(3)                                                                        --------->ARR11(3)                                                                     <---------WOX13(1)                                   --------->At4g35610             <------ZmHOX2a(1)<---------GLK1(1)                    <------ZmHOX2a(1) --------->At4g35610          ==============HOX2a_HOX2a                  <---------TOE2(3)<---------At4g35610         ---------->DOF2---------->DOF2               --------->ICU4    --------->DAG2               <------ZmHOX2a(1)     --------->GLK1(1)         <---------TOE1(3)      ---------->DOF2        <---------AHL20(2)<---------------AGL15 >TEIL   <---------TOE2(3)---------->DOF2      ---------->ID1 ===================HOX2a_HOX2a   tcgagtaagttaaggtaatgaaggatgggaaaggaaaagctgatgaattgtcgctattttcttaggaaaggattgatctttaaagcaaatcccttgaaac  15730100                                                                --------->ANAC58                                                                --------->ANAC58                  ---------->DOF2                               <----------ID1           <-------GAMYB                                     <---------ARR14(2)          <---------MYB46(3)                                 --------->ARR14(2)        <------NtERF2                 <---------ICU4       --------->LBD16           <---------YAB1      <---------DEAR3(1)           --------->YAB1   <---------HSFB2a(2)              <---------WOX13(1)     <---------ORA47(1)           <---------YAB1    --------->HSFB2a(2)    --------->ZAT14  <---------WOX13(1)      <---------MYB46(3)       ----------------->AGL1  <---------ZAT14   tctgatggacggcgattgaagaaagcgatggatgctataataactactagggttccagacccagaaacgacaaaatgtatactggtgattaatacaagcg  15730200                                                         --------->HSFB2a(2)                                                         <---------HSFB2a(2)                                                        <---------LBD16                                                        <---------ANAC46                                                       <---------LBD16                                                    --------->HSFC1(2)                                                    <---------HSFB2a(1)                                                    --------->At4g35610                         <----                                                    <---------HSFC1(2)                          <----                                                    <---------ZAT2<---------ARR14(2)       --------->ATHB12                                                    --------->HSFB2a(1)                   --------->ICU4                      <----------ID1    <XXXXXXXXXXXXXXXXXXXXMIR167C  ------>ZmHOX2a(1)   <---------YAB1       <------ZmHOX2a(1)  ---------->DOF2           <---------At4g35610                 <---------At4g35610   tataatataggaaactgaaattgagagacaaaggagaaacaagagaatgttggaagcttcgggaagcgattcctatagaatgcgagagagagatgattag  15730300                                                                             <---------------AGL15                                                                             --------------->AGL15                                                                            <-----------------AGL1                                                                            <-----------------AG                                                                            <-----------------AGL2                                                                            <-----------------AGL3                                                                        ------>ZmHOX2a(2)                                                                        =============================                                                                       <------ZmHOX2a(2)                            --------->YAB1                            --------->GLK1(2)                           <---------ATHB12                           --------->ARR14(2)                   --------->ALFIN1                                   --------->ARR11(3)                 <---------ANAC46                             *TSS    <---------ARR14(2)                 <---------ANAC58                      --------->ANAC58==============================                 <---------ANAC58                      --------->ANAC46--------->At4g35610               <---------ANAC46                        --------->ANAC58<---------At4g35610 -----TOE1(3) <---------AtMYB61                      --------->REM1(1)<---------ARR11(3)          --- -----TOE2(3) --------->ALFIN1                      <---------REM1(2)<---------GLK1(1)            ===   ggttttcttaagggatgtggtgtgtagcaatcgtagcgattagagctactgggctacacgacaagggaaggggatctgtctctatttgggatgttatctc  15730400                                                                         --------->TOE1(2)         <------ZmHOX2a(2)                   ------>MYB83             ------>MYB46(1)             --- ====HOX2a_HOX2a                             ------>MYB46(1)          ------>MYB83                --- ====HOX2a_HOX2a    ------>MYB46(1)        <---------MYB59          <---------MYB59            <----- --->ZmHOX2a(1)     ------>MYB83          --------->DEAR3(2)       --------->DEAR3(2)        -------- ===============HOX2a_HOX2a         <------------CBF         <------------CBF                <-------   ctctcttatggatcatcaaaccgaacatttgattacaaaattgaaccgaacatttgattacaaaattgaaccgaacattggattagactgtctaattaaa  15730500                                                    <---------AHL20(2)                                               --------->AHL20(2)                                               <---------AHL20(1)                  <---------ANAC58      <------MYB83                             <---------AHL20(2)       --------->ANAC58      <------MYB46(1)                          --------->AHL20(1)       --------->ANAC58 ------>TOE2(3)                        --------->ANAC58            --------->AHL20(2) ------>TOE1(3)                        --------->ANAC58   <-----------GT1          <---------ANAC58 ------GT1                           ---------->DOF2<---------AHL20(1) --------->DAG2 ->AHL20(2)           --------->YAB1<---------ATHB12--------->AHL20(2)---------->DOF2            ---- --AHL20(2)    ------->TEIL   <-----------GT1 --------->AHL20(2)   <---------AHL20(2)        <-------   ccttaatttggtttatgaactcaatattagtttttccaattaagccaattttattttatttttctgtattaaaaaagcaaattttgggttccaatataca  15730600             <---------AHL20(1)             --------->AHL20(1)           <---------ARR11(3)           --------->AHL20(1)      >>>>>>>>>E2Fd      >>>>>>>>>E2Fc     --------->LBD16     ------>NtERF2    --------->ANAC58    --------->ANAC58    ------->GAMYB             --------->ANAC55(2)    --------->ANAC46         <---------TOE1(3)   <---------MYB55(2)       <-----------GT1   --------->MYB46(3)      <-----------GT1                                <-----------GT1  >>>>>>>>>EIN3 ----->ANAC46--------->ARR11(3)  ------->TEIL   --------->DAG2   <---------YAB1          <-----------GT1 ----GT1   <---------AHL20(1)<---------TOE2(3) ---------->DOF2 <----------DOF2     <---------ANAC46   atccacccgccaaaatattttgtcaatttttaacgtatttttgaatcgaaaaaggaatttctgaacttttattgtttttcttcttgtgtttatacattgc  15730700                    <---------ICU4                    -------->HAHB4                   <---------ATHB51                 --------->YAB1              --------->TOE2(3)                                                                    --              --------->TOE1(3)                                                                   ---             <---------ANAC55(2)                                                                  <--             ----------->GT1                        ------>MYB83                              <------            <-------TEIL               <---------AHL20(2)                              <-----------GT1         --------->YAB1   --------->TOE1(3)  <------ZmHOX2a(1) --------->AHL20(2)      --------->ZAT6        <---------YAB1    --------->TOE2(3)<---------TOE2(3)   <---------AHL20(2)    <-----------GT1  <---------ARR11(3)--------->YAB1     --------->YAB1<---------ARR11(1)   ---------->DOF2     <------ <---------CCA1(2) --------->ICU4   <---------ICU4  ------>MYB46(1)    --------->TOE2(3)      -------   tctaaatcttatgatacgttaataatgaccttaattcatatttataaggaaaccaaatctattttttaaatattcttaaagcttagtttacactatataa  15730800                                                                              --------->AHL20(2)                                                                          <---------AHL20(2)                                                                         <---------AHL20(1)                                                                         --------->AHL20(1)                                                                       <---------AHL20(1)                                                                       --------->AHL20(1)      ------      --------->DAG2                                                  --------->AHL20(2)   <---------TOE2(3)  --------->YAB1                                                    --------->AHL20(2)     --------->MYB59 ------->WOX13(1)                                                 --------->AHL20(2)       --------->DAG2 ------>AHL20(2)                                                 --------->YAB1     --------->ANAC46 -------AHL20(2)                                             <---------AHL20(2)     --------->ANAC55(1) ---AHL20(2)        --------->WOX13(1)         <----------DOF2   --------->AHL20(2) <---------ANAC55(2) ---YAB1          <---------ATHB12          <-----------GT1  --------->AHL20(2)     --------->ANAC55(2) -->AHL20(2)    --------->WOX13(1)      <----------DOF2     --------->AHL20(2)<---------AHL20(2)   ttaatcaaaaattgattccaatcaatctctctactactaattctttttgctatatgtctatatttaataaaaatatatatttaaacacataataaggtag  15730900  Previous    Next  AGI:  At4g32610.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G25670.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G25670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44124.1) Range:  from: 15728149    to: 15730362    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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