Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              --------->AHL20(2)                                         --------->TOE2(3)      --------->TOE2(3)                                         --------->TOE1(3)     <---------ANAC55(2)                                        <---------ANAC55(2)    --------->ANAC55(2)                                        ----------->GT1        --------->ANAC46                                       <-------TEIL ---------->DOF2--------->WOX13(1) ----------->GT1                                      --------->CCA1(2)      <-----------GT1         --------->DAG2         ----------->GT1              --------->ARR14(1) <---------RVE1(1)         ---------->DOF2        ----------->GT1              --------->ARR14(2)  <---------CCA1(1)        <---------AHL20(2) -------->ANAC58                     --------->ARR11(1) <---------ARR11(3)      <---------YAB1 -------->ANAC58             ------->TEIL----------->GT1--------->ARR11(3)    <---------ICU4 ----ZAT18          ---------->DOF2  <---------ARR14(2) <---------AHL20(1)   <---------YAB1 --At4g35610   ---------->DOF2       <---------GLK1(2)  --------->AHL20(1)   --------->ICU4      <---   acaagacaaattggaaaaaaaggaaagaatgaatatacagatacgttaaaatgaaaaagatatttacgtcaatctattgattattaaaaggttaattttg  15707100                                       --------->ANAC55(1)                                       ----------->GT1                                       --------->ANAC58                                       --------->ANAC58                                       <---------ANAC46                                       --------->O2                                       --------->ANAC55(2)                                    --------->TGA2(2)                                   <-----------TGA1                                   <-----------HVH21                                  --------->ANAC55(2)                                  --------->REM1(1)                                  --------->ANAC58                                  <---------ANAC55(2)                                  <---------bZIP60(1)                                  --------->TGA1a                                  --------->bZIP60(1)                                  --------->ANAC46                                  --------->bZIP60(2)                                  <---------O2                                  --------->ANAC58                                  ==========================================bZIP_DOF                             --------->ALFIN1                            --------->ZAT18                <----------DOF2   --------->O2          --------->DAG2   <---------ANAC46       --------->ANAC46         ===================================bZIP_DOF         ---------->DOF2   <---------ANAC58     <-----------GT1     --------->ANAC58      <---------ANAC58   --------->AHL20(2)     --------->ANAC58 ======================bZIP_DOF                          <-----------GT1   -----   =========================================bZIP_DOF             <----------DOF2        --------->DAG2   ---------->DOF2    ---------->DOF2  <---------ANAC55(2)       <---------DAG2    <------ZmHOX2a(1) ------YAB1     ============================bZIP_DOF --------->ZAT6   ----------->GT1  ---------->DOF2   tcattaaaagcaaaagtgctttgccaaaggcgtgctacgtcacgtaaattatacaacactatgagggctttttggtaattttacaggaataaagctaacc  15707200                    <---------ANAC46                    <---------ANAC58                 --------->ARR14(2)                 <---------ARR14(2)          --------->At4g35610        ----------->HVH21      --------->ARR11(3)           --------->At4g35610      <---------ARR11(3)    --------->ANAC46     <---------CCA1(2)     --------->MYB46(3)    --------->ARR11(3)    --------->ANAC46                                              <---------LBD16    <---------AHL20(2)    --------->ANAC58                                 <---------AHL20(2)       -    <---------ARR11(3)    --------->ANAC58--------->AtLEC2             <---------AHL20(2)    <-------    --------->AHL20(1)  <---------ALFIN1<---------bZIP60(2)            --------->AHL20(2)   ---------    <---------AHL20(1) --------->SPL7------->GAMYB  <----------DOF2    --------->AHL20(1)   <xxxxxxxx --------->AHL20(2) <---------ANAC58<---------MYB52(2)    <---------TOE2(3)--------->AHL20(2)<------- ---->TOE2(3)   <---------GLK1(1) --------->MYB52(1)<---------DAG2     <---------AHL20(1) --------->LBD16   tcataatatatcttctgcaattccgtccacccaaaacaactgacatggaaactactttttaagtttgatacaataaaataaatatacttatccggtcaac  15707300        <---------At4g35610        --------->At4g35610       <---------YAB1 <---------YAB1                    ----------->GT1 -------->AHL20(2)               --------->MYB52(1)                        --------->ZAT6 --WRKY38(1)         <---------ICU4<----------ID1                        <-----------GT1 >WRKY18(1)         --------->AHL20(1)                            --------->ANAC58 xxxxxxxxsmallRNA(s)<---------AHL20(1)       ------->MYC3         --------->ANAC58 --WRKY12    ----------->GT1  --------->YAB1 <-------MYC3       --------->MYB52(1)           --------   atttttattctgatgaagtaaaaatattactaaaataacgaaaaacacgttttctccaaatgaaaaaaacgaaatttacactgaaatgtttttttttgta  15707400                                                           <---------AHL20(2)                    --------------->AtSPL8             --------->ATHB12           --------->ICU4                 --------->YAB1  --------->AHL20(2)     --------->ARR11(3)             --------->YAB1    <---------AHL20(2)                    <--------     --------------->AtSPL3     <---------AHL20(1)   <---------WOX13(1)                --------->At4g35610     --------------->AtSPL8     <---------AHL20(2)  <------------CBF                   <---------At4g35610     <---------------AtSPL3     --------->AHL20(1)<---------YAB1                  --------->At4g35610     <---------------AtSPL8  --------->YAB1      <---------AHL20(2)             --------->YAB1 ---------->DOF2 <----------DOF2--------->AHL20(2)<---------AHL20(2)         --------->WOX13(1) --->GT1 ------->TEIL     --------->TOE2(3)      --------->AHL20(2)--------->MYB52(2)  --------->ZAT2   aaaaaaagatgtacttattcttttagtacattaataaattagaataaaaattttaattgattaaatcgctagttgctattaatcagaagagctgagctac  15707500                                              <----------DOF2--------->ARR11(3)                                             <---------HSFC1(2)             <-----------GT1                                  <----------DOF2            --------->AHL20(1)                             <<<<<<<<<TBF1   <---------HSFB2a(1)      <---------ANAC58             <-                        <----------DOF2      --------->HSFB2a(1)      <---------ANAC58             <-                   --------->CCA1(2)         --------->HSFC1(2)       <---------ANAC46          <----      <----------DOF2  <---------ANAC58 <---------HSFB2a(2)  <---------AHL20(1)              <------- -At4g35610     *TSS   <---------ANAC58 --------->HSFB2a(2) <---------AHL20(2)               <-------   ttctaatgcttttttacagagagatgctttcttcttctttctctcgaactttctctctctaaatattttgtttcgttttctctctctctctctatttact  15707600                                                                                  --------->At4g35610                                                                                  <---------At4g35610                                                                                  <------MYB46(1)                                                                                  ----------->GT1                                                                                  <------MYB83                                                                            --------->ALFIN1                                                                          <------MYB83                                                                          <---------ANAC46--------->DAG2                                                                          <------MYB46(1)--------->DAG2                                                --------->ARR11(3)       --------->MYB46(2)         -                                          ----------->GT1                --------->MYB59---------->DOF2 --------ANAC58                           <---------ZAT6        --------->LBD16  <---------DEAR3(1) < --------ANAC58             <---------At4g35610 <---------ARR11(3)       --------->MYB111(1)  ------- ------DOF2           <------MYB46(1)   <---------ANAC46        <---------LBD16  --------->ALFIN1   - ----GT1              <------MYB83    <---------ZAT14         <---------LBD16    <---------AtMYB61 -- --AHL20(2) <---------AHL20(2)        --------->ZAT14       --------->GLK1(2) <------NtERF2  --------   ttcgttctctctattttttttgtttggtttagcttatttgtgaagtgttaaatcttcttcagtttctggggaaattaggtggggaggtgaaaaaggggga  15707700                                    <--------ATHB1                                    --------->ATHB51                                    <---------ICU4                                    <---------AHL20(2)                                   <---------YAB1                                    --------->AHL20(2)                                 --------->ATHB12                                   --------->ICU4                                      <---------ICU4                                   <---------YAB1                                      <--------HAHB4                                 --------->YAB1                                        --------->ATHB51                                <---------ATHB51                                      --------->ICU4                            --------->ZAT14                                           <---------YAB1                            <---------ZAT18                                     <---------ARR11(3)                         <---------ANAC46                                       --------->ARR11(3) <---------YAB1        --------->ZAT2                                          --------->CCA1(1) <---------AHL20(2)    <---------ZAT2                                          <---------GLK1(1) -------->AHL20(1)     --------->ZAT14                                         --------->RVE1(1) ---------AHL20(1)     --------->At4g35610                                     <---------RVE1(1) ---->GT1              <---------ZAT14                                         <---------CCA1(1) -------->AHL20(2)     <---------At4g35610                      <----------DOF2--------->GLK1(1) ------->YAB1<---------ANAC58   --------->ICU4   <---------ARR14(2)           --------->ARR11(3)  <-- --->GT1     <---------ANAC58   <---------ATHB12<------ZmHOX2a(1)             <---------ARR11(3)  <--   aatataattgaaattgggttctctctgctgtgcaataataatttctgagaggattgtgaagaagcgcttttatgtaagaagatatctcattattagttat  15707800                                                                                         ----------->GT1                      --------->MYB46(3)                                              --------->At4g35610          ----------->HVH21                                                           <---------ZAT2        --------->At4g35610                                                           <---------At4g35610       <---------ARR14(2)            <--------P                               <---------ZAT2       --------->ARR14(2)           <-------GAMYB                             -------->P----------->GT1       --------->GLK1(2)      <-----------RAV1(1)                             --------->ZAT2      <---------GLK1(2)   ------->GAMYB--------->MYB52(2)                     ------>MYB46(1) ---------GT1    --------->YAB1 --------->ALFIN1 ---------->DOF2              ------>MYB83  --------- -------AHL20(2) --------->TOE2(3) ----------->GT1                           --------->MYB52(1)   ttacatgagaatctgacattcttaacaactgtctgtggggttagttttgtccaaagaactatacagagatgtctcagaccaactgggaagctgataaaat  15707900                                                                         <------MYB83                                                               <---------DAG2        <---------YAB1                                                               <----------DOF2    --------->GLK1(2)        <----------DOF2                            ---------->DOF2       <---------ANAC46  <---------ARR11(3)                           <---------------AGL15     <------MYB46(1)  --------->ARR11(3)           <---------YAB1  ------>ZmHOX2a(1)    <-----------RAV1(1)          ---- >AHL20(2)            <---------YAB1       ------>ZmHOX2a(1)<-----------GT1      <---------GLK1(2)   gtgagttcttcttttttatgggttttgattcttgtaattgttctccttcctactaaaggtgttaacttttttgttgggttttagattctgagtgttttta  15708000  Previous    Next  AGI:  At4g32551.1    Description:  LUG (LEUNIG). Identical to Transcriptional corepressor LEUNIG (LUG) [Arabidopsis Thaliana] (GB:Q9FUY2;GB:Q9SZY9); similar to WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT2G32700.6); similar to unnamed protein product [Vitis vinifera] (GB:CAO44173.1); similar to STYLOSA protein [Antirrhinum majus] (GB:CAF18245.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65593.1); contains InterPro domain Single-stranded DNA-binding protein, SSDP; (InterPro:IPR007591); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain LisH Range:  from: 15707516    to: 15713585    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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