Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     --------->AHL20(2)                                                   --------->AHL20(1)                                    --------->AHL20(2)    <------------MYB.PH3(2)                             -------->P<---------AHL20(2) <---------MYB52(2)                             ------>MYB83          <---------AHL20(2)                             ------>MYB46(1)    --------->YAB1                                =======                       <---------At4g35610  --------->AHL20(2)                                =======                       --------->GLK1(1)<---------AHL20(2)<---------MYB59                     ------>ZmHOX2a(1)  <---------GLK1(2)    --------->At4g35610  <---------AHL20(2)--------->ZAT6  <---------TOE2(3)   <-- ----DOF2       ---------->DOF2     <---------AHL20(2)  <-----------GT1  <---------ZAT6     ---------   tacagaatgtctaaactctaaaggcatctccaacctatttttttatttaaaaataaaataactaactctattttagagttaagttttattccaatcctat  15700500                                   <---------AHL20(2)                                   --------->AHL20(2)                            ----------->GT1                           <---------TOE2(3)                        ------>ZmHOX2a(2)                ----------->GT1                        ============================HOX2a_HOX2a                       <------ZmHOX2a(2)        ------>ZmHOX2a(2)                       =============================HOX2a_HOX2a                       --------->CCA1(2)       <------ZmHOX2a(2)                      <---------ARR11(3)       --------->GLK1(1)                   ----------->GT1                      --------->ARR11(3)       <---------GLK1(1)            <---------YAB1                      >>>>>>>>>GATA-2         --------->ARR11(3)        <----------DOF2                      >>>>>>>>>GATA-3         <---------ARR14(2)     --------->GLK1(2)                      >>>>>>>>>GATA-4         --------->ARR14(2)     --------->ARR11(3) ==============================HOX2a_HOX2a    <---------ARR11(3)    --------->CCA1(1) =============================HOX2a_HOX2a    <------ZmHOX2a(1)      --------->RVE1(1) -------AHL20(2)      --------->AGP1       <---------TOE2(3)      --------->AHL20(2)           ------ >YAB1                >>>>>>>>>GATA-1  --------->YAB1 ---------->DOF2<---------ARR11(3)   --------->AHL20(2)   tcaatttccaatttctaaaatagagatctaatgtaaattaaaaataaggatctcttaaaagataaaaaaaaaatctttatttttgaagttaaaaatatag  15700600                                --------->TOE2(3)                              <---------YAB1                        ---------->DOF2                                        --------->AHL20(2)                   <---------------AGL15                     <------MYB46(1)  --------->AHL20(2)                   <----------DOF2                           <---------DEAR3(2)<---------AHL20(2)                  <---------ANAC58                           <------MYB83     <---------AHL20(1)                  <---------ANAC58 ---------->DOF2  <------------CBF          --------->AHL20(1)    - ----->GT1      <-----------GT1 --------->TOE1(3)  <---------GLK1(2)  --------->MYB52(1)        -----   tagaattaagaggtttttttgctttctaaagtagccttaaagaatatagaacagaattggagtcggtctaaaaaacagaatataattttagtatctaaat  15700700                                                                --------->MYB46(3)                                                           --------->PCF2                                                  --------->TOE2(3)                                                <---------ARR14(2)                                                <---------ARR11(3)                                                --------->ARR14(2)                                                --------->GLK1(2)                                                <-----------ARR10                                               <---------ARR14(1)--------->AtMYB61                                      <-----------TGA1     <---------TCP15(1)                                      <-----------HVH21  --------->HSFB2a(1)     --------->AHL20(2)              --------->ANAC58    <---------HSFC1(2)                      ----     --------->YAB1                  --------->ANAC58    --------->HSFC1(2)                     ----- ----------->CBF          ----------->GT1      <---------GLK1(2)<---------MYB52(2)            ------- ---->YAB1            <---------YAB1 --------->ANAC46    <---------HSFB2a(1)                  <------   ataacaataaaaaacaaatgtactatgtttgtaaataaaacgtcatagagaatcttagaaggtcccacaaacccaaatcacaaatgaaaaccccttctat  15700800         <----------DOF2  ------------>CBF    ---------->DOF2 ----->AHL20(2)   --------->ANAC58                    <---------MYB59 ------>TBP       --------->ANAC58                   --------->ANAC46   <---------ALFIN1 -->HSFB2a(2)     --------->ANAC46        ----------->GT1              --------->ZAT14            --- ---HSFB2a(2)   <---------ALFIN1        ---------->DOF2      <----------DOF2 <----------DOF2 <-------   aaattccaattctttctcacacccaaaagaacatttttctccaaaagttaaacatacctcactctttagtctctccactctttaaaacattttccatcat  15700900                                                                                  --------->ATERF1(1)                                                                       <---------ICU4                                                                       --------->YAB1                                                                      <---------ATHB12                                                                 --------->PCF2  --------->ZAT2                                                                 <---------TCP20 <---------ZAT2                                                              --------->ANAC46   --------->At4g35610                                                           <---------ZAT14      <---------ARR14(2)                                                           <---------REM1(2)--------->At4g35610                                                        --------->TOE1(1) --------->ATHB12                             --------->MYB52(1)         --------->TOE2(1) <---------ICU4        <---- ------>WOX13(1)     --------->ANAC46                  ------>ZmHOX2a(1) <---------YAB1         <---- --ATHB12           ------>ZmHOX2a(1)          <---------CCA1(2)<-----------HVH21<---------At4g35610   ccatcaagaatggagtctcatcctcacaacaaaactgaccagacccagcatatcatcctcgtacacggtcccatcatcatcggagctggcccttctggtc  15701000                                                                                                 ----                                                                                                 ----                                                                                              -------                                     <----------DOF2     --------->ARR14(2)                ----------                          --------->REM1(2)         <-----------HVH21                      --------->MYB46(3)                          --------->ZAT14         <---------HSFB2a(1)                     --------->SPL7   --------->O2          --------->ALFIN1       <<<<<<<ZML2                               ------>MYB83   --------->TGA1a      --------->LBD16      --------->HSFB2a(2)                          ------>MYB46(1)   =============================================bZIP_DOF <---------ARR14(2)             --------->TOE2(2)   --------->bZIP60(2) <---------ANAC58      ------>ZmHOX2a(1)                          --------->TOE1(2) -----ANAC58           <---------ANAC46      <---------HSFB2a(2)              --------->GLK1(1)------ -----ANAC58           <---------ANAC58    ------>ZmHOX2a(2)                  <---------GLK1(1)------   ttgccacttcagcatgtctctcgagccgtggagtcccttctttgatcctagaacggtcggattcaatagcatctctatggaaatctaaaacctacgaccg  15701100                                         --------->LBD16                                         ------>ZmHOX2a(1)                                         --------->HSFB2a(2)                                  <-----------------AGL1                               --------->ARR14(2)                                              ------                               <---------ARR14(2)                                            <------- -->MYB46(1)                  <-------GAMYB                                                 <-------- -->MYB83                     <-----------HVH21                                             <-------- -->DEAR3(2)                 <---------DEAR3(2)    --------->LBD16                   <---------ARR11(3) ->HVH21                   <---------LBD16        --------->LBD16  <-----------GT1   --------->ARR11(3) --->DREB2C(2)        <----------DOF2  ----------->RAV1(2)<-----------GT1  --------->HSFB2a(2) ------ ->GAMYB              <---------DAG2 <---------ALFIN1  <---------ICU4      <---------HSFB2a(2) ------   actcagactccatctcccaaaacacttttgccggttacccctcctggacttccctgaatattacccaaaatacccttccaaaaacgagttcttggcctac  15701200                                                            --------->ZAT2                                                            <---------ZAT2                                                            <---------At4g35610                                                            --------->At4g35610     --------->HSFB2a(2)                                                           ------->TEIL            <---------LBD16                                                        --------->ANAC46        <---------ARR14(2)                                                        --------->ANAC58        --------->ARR14(2)                      --------->LBD16                   --------->ANAC58      --------->LBD16 -->P ------>ZmHOX2a(1)                         --------->TOE1(2)           <---------LBD16 --MYB59            <---------LBD16            ----------->GT1     <---------GLK1(2)<---------HSFB2a(2) -ANAC58--------->ANAC58                      <---------------AtSPL8       ------>ZmHOX2a(1) -ANAC58--------->ANAC58                      --------------->AtSPL3 --------->HSFC1(2)     --------- >MYB46(1)     <---------ALFIN1      <-------TEIL     ---------->DOF2--------->HSFB2a(1) ----------->GT1 >MYB83 --------->ANAC46         <---------TOE1(2)<-------TEIL   <---------YAB1<---------MYB52(1)  --   cttgagtcctacgcttcccacttccgcatcgctccaaggttcaacaagaacgtacaaaacgcagcttacgattcttcctccggtttctggagagtaaaga  15701300                                                         --------->AGP1                                                         --------->ARR11(3)                                                         <---------ARR11(3)                                          <------NtERF2  <---------ARR14(2)                                         --------->MYB52(1)<-------TEIL--------->LBD16             <-                                         ------>NtERF2  --------->GLK1(1)      --------->LBD16    ---                                       --------->ATERF1(1)<------ZmHOX2a(2)    <---------LBD16    ---  <---------ICU4                       --------->MYB46(3)--------->ARR14(2)   <---------LBD16    <---  --------->YAB1                  --------->YAB1        --------->At4g35610--------->GLK1(2)     <--- <---------YAB1              <---------ANAC58       --------->ANAC58  --------->LBD16            <--- ->DOF2                      <---------ANAC58       --------->ANAC58  --------->ANAC46          <---- ------->YAB1                <---------ANAC46<-----------HVH21       --------->LBD16 ---------->DOF2<   ctcatgataacacagagtacctctccaaatggcttatcgtagccaccggtgagaacgcagatccatacttccccgagattccagggagaaagaagttttc  15701400  Previous    Next  AGI:  At4g32540.1    Description:  YUC (YUCCA); FAD binding / NADP binding / flavin-containing monooxygenase/ monooxygenase/ oxidoreductase. similar to YUC4 (YUCCA4), monooxygenase [Arabidopsis thaliana] (TAIR:AT5G11320.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44170.1); contains InterPro domain Flavin-containing monooxygenase FMO; (InterPro:IPR000960); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterPro:IPR001327); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class-II; (Inte Range:  from: 15700910    to: 15702966    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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