Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    --------------->AtSPL8                                <-----------RAV1(1)                               <-------MYC2                               <-------MYC3                               ------->MYC2                               ------->MYC3                                               --------->ARR11(3)                            <---------ANAC46                                              --------->GLK1(2)                            <---------ANAC58                                    --------->ANAC58                       --------->ALFIN1                                         --------->ANAC46                       <-----------RAV1(1)                        ------->TEIL  <---------ANAC55(2)          ---------->DOF2   <---------ANAC58                --------->ZAT6      --------->ANAC58 ------->HVH21       <---------ANAC46                       <---------ALFIN1    --------->ANAC55(2) -----HVH21          <---------ANAC58              <---------ALFIN1         <-----------HVH21 ->DEAR3(1)          <---------ANAC58     <----------DOF2 ----------->RAV1(1)  --------------->AtSPL3 -GT1    <---------WRKY12   <---------AtLEC2   <-----------GT1   <---------GLK1(2) ------->TEIL   tgagagggaagtcaaagggtgagtcgtgttgcatgtgttgtactctttttcactcacctccaacactgaatcttttcccttcacgtacttaaaatctagc  15679300                          --------->YAB1                          <---------ICU4                                            --------->WRKY45                    --------->AtLEC2                                                --------->WRKY38(1)                  <---------ICU4                                                    --------->WRKY12                  --------->YAB1                                                   --------->DOF5.7(2)                 <---------ATHB12   <---------ARR14(2)                            <-------GAMYB               --------->YAB1       --------->ARR14(2)                           <---------ANAC46 <--              <---------AHL20(2)   <---------CCA1(2)                             <---------MYB46(3) <     --------->MYB46(3)  --------->ICU4<-----------RAV1(1)                    --------->ALFIN1    ---   aaaatcaacaattgatataatcatgcattaatgacacatatctgtggccaaatagaagagaagagagagacttacaaagagtgtcgttgacttgaaaccg  15679400                                               ------->GAMYB                                               --------->AtMYB61                                              --------->MYB46(3)                         --------->LBD16      <---------ATHB12                         <---------LBD16     ------>MYB83                         ------>ZmHOX2a(1)   ------>MYB46(1)                        --------->TOE1(2)    -------->P                    --------->KAN4(2)       ------>MYB46(1)              --------->YAB1                ------>MYB83           --------->ARR11(3)             <---------ATHB12   <------ZmHOX2a(1)      --------->MYB46(3)   <-----------HVH21--------->YAB1        <---------MYB59    ------>MYB46(1) <---------ANAC46  --------->KAN4(1)     --------->ANAC58    ------>MYB83 <---------ZAT18     ------- -------ARR14(2)   <---------KAN4(1)     --------->ANAC58  --------->AtMYB61               --------->ZAT14 ---------------------WRI1--------->ANAC46--------->MYB46(3)----------->RAV1(1)            <---------ZAT14 ------>ARR14(2)  <---------KAN4(2)    <------ZmHOX2a(1)  --------->MYB46(3)           --------->ZAT6   gtttcggtgagaccaatgagaataatcctcggaaggagtaaggacccaaccatctctcccaccaacatagaacttgtgcccatttgataactctatacta  15679500                                                                                           ------>MYB46(1)                                   --------->TOE2(3)                           --------->AHL20(2)                            <---------ANAC55(2)                                <---------AHL20(2)                       <---------ICU4                                        <----------DOF2                       --------->YAB1      --------->ICU4                    --------->TOE2(3)   <---                      <---------ATHB12--------->WOX13(1)       --------->ARR14(2)          ------>MYB83              <---------ICU4--------->ANAC58                   <---------ARR14(2)     --------->ZAT6 -->ANAC46<---------ATHB12  --------->ANAC58<---------ICU4     <---------ARR11(3)   <-----------GT1   aaccccaaacccatcaacatcacaatcatcaagtaaacatcagtcattttgacaaaaaccatcaatatccgaaccaaaactttaattaacaccaactttc  15679600                                       <---------ANAC58                                       <---------ANAC58                                      <---------MYB46(3)                                   <---------ANAC46                                 <---------MYB46(3)                                             <----                            <------MYB46(1)                                                     <----                            <---------ANAC46                                                    <----                            <---------ANAC58                                                    <----                       <---------AHL20(2)      <---------ANAC46                                 <----                      <---------AHL20(2)   <---------ANAC58                                    ------                      --------->AHL20(2)   <---------ANAC58<-----------TBP                     <-----                  <---------YAB1<---------AtMYB61         *TSS                                <------          --------->TOE1(3) <------MYB83  <---------MYB46(3)--------->ICU4                   <-------       <---------CCA1(2)    <---------ANAC58   <---------ANAC58                            <---------MYB46(3) --------GT1   --------->ZAT6 <---------ANAC46 <---------ANAC58     ---------->DOF2<-----------TBP---   tactctcttatagcttaactctcattaatttggtgtggtttgggtgcttgcttgtatgtgtatttatggtgaaagtagacaagagatttatagccgttgg  15679700 -----ANAC58 -----ANAC46 --MYB46(1) -----ANAC58                                                                                    ----- --MYB83                                           <---------ANAC58                             ----- --->MYB55(2)                                      <---------ANAC58 <---------CCA1(2)  <-------MYC3 ----MYB46(3)                            --------->AHL20(2) <---------ANAC58          --------->ANAC46 ---MYB55(1)                            <---------ATHB12    <---------ANAC58      <-----------GT1 --MYB52(1)                           --------->WOX13(1)<---------ANAC58    <----------DOF2     ----- -------->HVH21<---------AtLEC2     ------------>CBF    <---------ANAC58<----------DOF2------->MYC3   gtgaagcgtttggctgtgcatcgatatgtagagaaaatgccaattaagtagaagcgtttcgttcttgctcatctctttcttttgttacacgtttcgacat  15679800                                                      --------->YAB1         --------->RAP2.6(3)          --------->ARR11(3) <---------ICU4        --------->MYB52(1)  <-----------GT1 <-----------GT1  --------->YAB1 ---->ANAC58              --------->YAB1 <----------DOF2<---------YAB1 ---->AtLEC2        --------->ANAC46--------->MYB59   <---------ICU4 ---->ANAC58  --------->GLK1(1)  <-----------HVH21 --------->YAB1   gcaatagacttaacggctatctacacaatattactagtcaggtctttaactactcatcatcattcatcaagtacaacttaaaatttcattttttaaaatt  15679900                                                         --------->YAB1          --------->ANAC55(2)                            <---------ICU4          <---------ANAC55(2)                     ----------->HVH21         <---------TOE2(3)                 <------ZmHOX2a(2)        <-----------GT1                   --------->ARR11(3)             --------------->AGL15  <----        --------->MYB52(1)             <------ZmHOX2a(1)<---------ATHB51 <----------DOF2    ---------     --------->YAB1                 <-----------RAV1(2) --------->ICU4   <---------DAG2     ---------  --------->TOE2(3)        --------->ZAT6--------->GLK1(1)            <-----------GT1   <---------YAB1  <----------DOF2        <-----------GT1 <---------GLK1(1) <---------YAB1<---------------AGL15 <-----   caaactttaataacgtattgtcttattttacactattagcaggagatcagggatgacaattatgaattgtttttactttttagaggtattatgcaagtta  15680000                                                                                            ---------                                                                                          ---------->DOF2                                     ----------->GT1                                --------->AHL20(2)      --------->AHL20(2)            ----------->GT1                        --------->ARR14(2) ---TEIL             <---------MYB46(3)                                    <---------ARR14(2) >ANAC58         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                 --------->DAG2 <---------AHL20(2) >ANAC58 --------->AHL20(2)        --------->DAG2                   ---------->DOF2--------->ICU4 ------GT1<---------AHL20(2)     ---------->DOF2                 --------->YAB1    <---------ATHB12--   catttcaaatatttaatagtcagtagttagtcaccaaaaggttaaatttgtgcataaaacatagcaaacataaagtgtatatgcaataaatgaaaagttt  15680100                                                                     <---------WRKY18(1)                                      ----------------->AG  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)            <---------AHL20(2)     --------->GLK1(1)       --------->MYB46(3)           <---------AHL20(1)      <---------GLK1(1)       <---------MYB52(2)   --------->TOE2(3)           <---------AHL20(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    <---------At4g35610           --------->AHL20(2)--------->GLK1(2)            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)     ----------->GT1        <---------GLK1(2)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  --------->ATHB12        <---------TOE1(3)              ----------->RAV1(1)    <----------DOF2 <---------YAB1           <---------TOE2(3)       <---------YAB1    ----------->HVH21         ------- -->GT1   --------->ICU4  <---------YAB1         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)   --------->ICU4 ------->YAB1           <-----------GT1      ----------->GT1xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   atcgtgattgtaatttttttttttttttaagattccgatatccaaaaatgttattctagcaacaaatggtttgactgagctactttagtaattcttcgtc  15680200  Previous    Next  AGI:  At4g32490.1    Description:  plastocyanin-like domain-containing protein. similar to plastocyanin-like domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G28365.1); similar to unknown [Populus trichocarpa] (GB:ABK95044.1); contains InterPro domain Cupredoxin (InterPro:IPR008972); contains InterPro domain Plastocyanin-like; (InterPro:IPR003245) Range:  from: 15678653    to: 15679658    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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