Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                             --------                                                                                             ------>NtERF2                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                        <---------ANAC58                                                                                        <---------ANAC58                                                   --------->ZAT6                   <---------ANAC58 <---------At4g35610                               <-----------GT1      --------->MYB46(3)------>NtERF2 --->YAB1                               <---------MYB46(3)    <---------ANAC58      <---------ANAC58 ---YAB1  ----------->HVH21         <---------TOE2(3)         <---------ANAC58     <---------At4g35610   tagagctcatacttgacatcgacaaactcaatactatataggttgttcagttttcactatatgagcttgtgtcaacaactatttgagcttgcctccgaca  15638200                                                     <---------ANAC58                                                     <---------ANAC58                                                  <---------ZAT18                                                  --------->ZAT18                                               <---------TGA1a                                               =========================MYC_MYB                                               <---------O2                                            ----------->HVH21                                           ------>ZmHOX2a(2)                                          <------ZmHOX2a(2)                                          --------->CCA1(2)                                         <---------AGP1                                         <---------ARR14(2)                                         --------->AGP1 ----->ICU4                              --------->ARR14(2)    ------>MYB46(1) --->RAV1(1)                             --------->ARR11(3)    -------->P -ETT(1)                                 <---------ARR11(3)    ------>MYB83                      ---- -->HVH21                               <---------CCA1(2)     <---------ALFIN1                   ---- >ANAC46    --------->MYB46(3)      ------->TEIL --------->ALFIN1------->GAMYB                  -----   taattcgaacaacaacaatcgttttgagttttgtgatgaaccagatctgaagtgggcttgagcccaaccccattgaaagaatgtttgtccagtccatgaa  15638300                                                                                         ------->MYC2                                                                                         <-------MYC3                                                                                         <-------MYC2                                                                                         ------->MYC3                                                                                        <---------O2                                                                                        --------->O2                                                                                        --------->TGA1a                                      <---------------AGL15                             --------->ANAC58                                      --------------->AGL15                             <---------TGA1a                                 <---------ANAC58                                       --------->ANAC58                             <-------MYC3                                               <---------ANAC55(2)                             ------->MYC3                                         <-----------HVH21                            <-----------RAV1(1)                                  <------MYB46(1)                            <---------TGA1a                                      <------MYB83                            <---------O2                                        <---------AtMYB61                            --------->TGA1a                                     --------->MYB59                            --------->PIF3(3)         --------->ZAT2       <---------TOE2(3)                            ========================bZIP_DOF          <-------GAMYB     --------->ANAC46                            --------->O2              ----------->RAV1(2)  <---------TOE1(3)    <----                     --------->At4g35610 <----------DOF2              ============================MYC_MYB ----->ANAC58     ---------->DOF2<---------ANAC46     --------->At4g35610=========================bZIP_DOF ----->ANAC58     ====================bZIP_DOF        <---------At4g35610---------->DOF2--------->ANAC55(2) -->TEIL      --------->TOE2(3)  <---------ANAC58     <---------ZAT2<---------ANAC46  <---------ALFIN1   cgcgagaaaaaaaaaaacttaaaagctcccatgtggcttacttctttttgaaattcagctggattgagtttcggttaaaggtttggtcacacgtgaaaac  15638400                                                                                        --------->AHL20(2)                                                                                     --------->ATHB51                                                                                     --------->ATHB12                                                                                     -------->HAHB4                                                 <---------AHL20(2)                  <---------ICU4                                                 -------->ATHB1                      <--------ATHB1                                                 --------->AHL20(2)                 <---------AHL20(2)                                                 --------->ATHB51                   <---------ATHB51                                                 <--------HAHB4                     --------->AHL20(2)                                                 <---------ICU4              --------->HSFB2a(2)                                                <---------ATHB51             <---------HSFC1(1)                                                <---------ATHB12       --------------->AGL15                                                --------->ICU4         <---------------AGL15 <-------                                            <------NtERF2         <---------GLK1(1) --------->ICU4                                          --------->ETT(1) --------->ARR14(2)<---------HSFB2a(2)                                         --------->RAP2.6(3)    <---------AtLEC2    <---------YAB1  -                                      <----------DOF2      <---------ARR14(2)--------->HSFC1(1)------                                     <---------ANAC58  <---------LBD16----------------->AGL3 <-------                                     <---------ANAC46 <---------ANAC58----------------->AGL1 --------                                     <---------AtLEC2 <---------ANAC58----------------->AG   <------- ------ID1          --------->ANAC46 <---------ANAC58 <---------ANAC46----------------->AGL2---------   tacaaaaaccgagacttcttatacggctctactacatttgcttgtcggcaattatttcgtggatttgcatttcccaattctagaaaataattgaatatct  15638500                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                               <-----                                                                                              -------                                                                                              -------                                                                                             ------>MYB83                                                                                             --------                                                                        <---------SPL7       --------                                                                       <---------TGA1a       --------                                                                       =======================MYC_MYB                                                                       ==============================                                                                       ==============================                                                                       ==============================                                                                       ===========================MYC_MYB                                                                       --------->TGA1a       --------                                                                       --------->ANAC46      ------>MYB46(1)                                                                    <---------WRKY38(1)    <---------MYB55(2)                                                                 --------->DEAR3(1)        <---------MYB46(2)                                                                <------NtERF2              --------->AtMYB61                                                               --------->At4g35610         <---------MYB111(2)                                                               --------->LBD16             <---------MYB111(1)                                                               <---------At4g35610         <---------MYB59                                                               --------->ZAT14             --------->MYB46(3)                                                               <------NtERF2             ------>MYB46(1)                                                               ------>NtERF2            --------->MYB55(1)                                                              --------->RRTF1(2)       <---------MYB59                                                              --------->RRTF1(3)       <---------MYB111(1)                                                              --------->RAP2.3(3)      --------->MYB46(3)                                                              --------->RAP2.3(2)      <---------MYB55(2)                                                              ----------->RAV1(1)      <---------MYB46(2)                                                             <------NtERF2  <---------ALFIN1---------    <---------AHL20(2)                                       --------->RRTF1(1)        <---------MYB111(2)    <---------AHL20(1)                                       --------->DEAR4(2)----------->HVH21<----    --------->AHL20(1)                                       --------->RAP2.3(1)     ------>MYB83----    --------->AHL20(2)                                       --------->ATERF1(1)     ------>MYB46(1)< --ARR14(2)                                            ==========================bZIP_DOF------>MYB83 -------->ZAT6                                   --------->AHL20(2) <---------ETT(2) -------->P------ --->TOE2(3)                           --------->AHL20(2)   <---------RAP2.3(1)--------->WRKY12------ ----ARR10                         ---------->DOF2     ---------->DOF2 --------->bZIP60(2)--------->MYB46(3) ->ARR11(3)           <---------AHL20(2)    --------->AHL20(2)--------->DEAR3(1)   <---------MYB59<-- --ARR11(3)           --------->AHL20(2)   --------->AHL20(2)--------->RAP2.6(1)   <---------MYB46(2) >RVE1(1)         <----------DOF2  ==============================================bZIP_DOF-------->P--   taacaataaaatataaaactctttttaattttagtttcaaagaaaataaaaaaaaatcaaagcgccgcagtcgacgtcccactgacctacctaccaaccc  15638600      <----------ID1    --------->DAG2 -------------->AGL15 ----------------AGL2 --------------->AGL2 ------->MYB46(3) --------------->AGL3 --------------->AGL1 ----------------AGL1 ------>ANAC46 ------>ANAC58 ------>ANAC58 -->MYB83 ----MYB55(2) -->MYB46(3) -->DEAR3(2) ->ANAC58 ->ANAC46 >P---------->DOF2 ==MYC_MYB =============bZIP_DOF =MYC_MYB ->ANAC58 >MYB55(1) --------->ANAC58                              ---------->DOF2 -----ALFIN1                                            ------->GAMYB -->MYB46(1)                      ----------->GT1      --------->ANAC46               --------->WRKY18(1) ---------------AGL15           ---------->DOF2   --------->TOE2(3)                  <-----------HVH21 ->GAMYB   --------->ANAC58    *TSS             <---------ARR11(3)                  <------MYB83 --->MYB46(3)              ----------->GT1      --------->ARR11(3)                  <------MYB46(1) - ---------------AGL1--------->At4g35610   --------->TOE1(3)            <---------ATHB12           <-- --------------->AG--------->MYB52(1)     --------->TOE2(3)    --------->SPL7   --------->ATHB12 ----   acccaaaaagggcaagaaaactagcagactggttaaaagtaaaaccctaaaatctcaacgaaagggacgaccaattgttcgacgattggtcatggggaaa  15638700                                                        --------->ARR14(2)                                                        <---------ARR14(2)                          -                                                       <------ZmHOX2a(1)                            <                                              <-----------------AG                                  <                                              <-----------------AGL2                      --------->MYB46(3)                                              <-----------------AGL1                     ------>MYB83                       <---------HSFB2a(2)    ----------------->AG                       ------>MYB46(1)                       --------->HSFB2a(2)    ----------------->AGL1                     --------->ANAC58         <---------ATHB12 <------ZmHOX2a(1) <---------ARR14(2)                           --------->ANAC46 -------->LBD16        <---------LBD16      --------->ARR14(2)                           --------->ANAC58 -------LBD16      <---------ARR14(2)      <---------MYB52(1)                       <-----------GT1<- ----->MYB52(1)    --------->ARR14(2) <-----------GT1<---------TOE2(3)      --------->At4g35610   <--   accggaatccaattgttcgacgattcgaggaatgggtttttctccgtttccgatttaggattcgattcgagcctaaacagctctaattaccacccaattg  15638800                                                              ----------->RAV1(1)                                                            <-----------------AGL1                                                            ----------------->AGL1                                                            ----------------->AG                                                         <----------DOF2                                                        <---------HSFB2a(1)                                                        --------->HSFB2a(1)                                                        ------>ZmHOX2a(2)                                                       <------ZmHOX2a(2)                                                      <-----------ARR10                                                      <---------ARR11(1)           ------>NtERF2                              <---------ARR14(2)          --------->DEAR3(1)                          --------->ARR14(2)                           <-       --------->ANAC46                               --------->ARR11(3)                           --    --------->KAN4(2)                                 <---------ARR11(3)                   <---------ZAT2   <----------TaMYB80                                <---------CCA1(2)                     <---------At4g35610 <-------GAMYB                                       <---------ARR14(1)  --------->MYB46(3)--------->ZAT2 ---------->GT1                                    --------->TOE1(1)   ----------->RAV1(1) --------->At4g35610 ------MYB46(1)     --------->YAB1                 --------->TOE2(1)--------->ANAC58   --------->ANAC46 ------MYB83<------NtERF2                         ------>ZmHOX2a(1) --------->ANAC58  <---------REM1(2) --------MYB46(3)--------->WOX13(1)               <---------LBD16------->GAMYB <---------GLK1(2)  --- -------ANAC46--------->TOE2(3)                   =============HOX2a_HOX2a----------->RAV1(1)    <---   gtgggttattcgccagcgttaatcagactaatccattcgcatccctctcgtcctcggatctttccaacagaggcaacaacagcttctctacccagctcaa  15638900                               <------ZmHOX2a(1)                     ------>NtERF2                     --------->LBD16               <----------TaMYB80              ---------->TaMYB80                                                    <---------PCF2      --------->REM1(1)  ---------->DOF2                                            --------->At4g35610      --------->ANAC46<------NtERF2                                                 <---------At4g35610     --------->ZAT14<---------LBD16                                               <---------ZAT18 ------>ZmHOX2a(2)  --------->LBD16                                               <---------DEAR3(1) =====================================HOX2a_HOX2a              <------ZmHOX2a(1) --------->ALFIN1 --------ARR11(3)   <---------ANAC46                  <---------ANAC46        --------->DAG2 ------->ARR11(3)  <---------LBD16   <------ZmHOX2a(1)<---------ANAC58      ---------->DOF2 ------>YAB1  --------->ARR14(2)  <------ZmHOX2a(1)   <---------ANAC58   >>>>>>>>>TBF1 ------ATHB12 <---------ARR14(2)--------->ALFIN1<---------AHL20(2)   <------ZmHOX2a(1)----------->HVH21   tgatctctacaccaagtatatgccgggaaaagaggaggaggaagaagtagttaatggcgagaagaggaagaggaagaagaaaggtgggctcacactgaag  15639000                          <------NtERF2                         <---------MYB46(3)                         ------>NtERF2                         <---------ERF1                         <---------RAP2.3(1)                        --------->ATERF1(2)                        <---------RAP2.6(2)                        --------->DEAR3(1)                        <---------ANAC46                        <---------DEAR3(1)                       --------->ATERF1(1)                       <------NtERF2                       ------>NtERF2                       <---------At4g35610                                   <-------GAMYB                      <---------RRTF1(1)                                    --------->DEAR3(1)                      <---------ERF1                                        <---------ANAC46                      <---------RAP2.3(1)                            <-------GAMYB                     <---------DEAR3(1)                              <---------ANAC58                     <---------ANAC58                                <---------ANAC58                     <---------RRTF1(3)                             <---------MYB46(3)                     <---------ANAC58                               --------->MYB52(2)                     <---------ANAC46                               --------->MYB55(2)                     <---------RAP2.6(2)                            --------->ABI4(2)                    <---------LBD16                                <---------AtMYB61              ------>ZmHOX2a(1)---------->DOF2             <---------HSFB2a(2)                -------     ------>ZmHOX2a(2)<---------ATERF1(1)           <---------DEAR3(1)     <------NtERF2    <------ZmHOX2a(1)     ================HOX2a_HOX2a       --------->At4g35610<---------ANAC46------>NtERF2  <---------ICU4    <------ZmHOX2a(2)<---------RRTF1(2)--------->ZAT14   <------NtERF2    <---------RAP2.3(1) -------    =================HOX2a_HOX2a  <---------At4g35610  --------->ALFIN1  <---------ANAC46--------->YAB1   <---------ARR11(3)<---------RAP2.3(3)     --------->ZAT2--------->HSFB2a(2)<---------MYB52(1) ----   --------->ARR11(3)<---------RAP2.3(2)     --------->At4g35610   --------->ALFIN1     <---------ATHB12 <---------YAB1 --------->MYB52(2)<---------LBD16  <---------At4g35610<--------P      --------->WOX13(1)   attaagatcgctaatccttcgttgcggcggctattaagcggagcagtagctggagcggtgtcgagaacggtggttgcgccgttggagacaatcaggacgc  15639100  Previous    Next  AGI:  At4g32400.1    Description:  SHS1 (SODIUM HYPERSENSITIVE 1); binding / transporter. similar to mitochondrial substrate carrier family protein [Arabidopsis thaliana] (TAIR:AT3G20240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44212.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73822.1); contains InterPro domain Mitochondrial substrate carrier; (InterPro:IPR001993); contains InterPro domain Mitochondrial carrier protein; (InterPro:IPR002067) Range:  from: 15638631    to: 15640471    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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