Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            ------->TEIL          --------->SPL7       --------->ANAC58       --------->ANAC58                                                                 --------->DAG2      --------->SPL7                                                                   ---------->DOF2    <---------SPL7                                                           ------>ZmHOX2a(2)  <---------------AtSPL3                                                    <------ZmHOX2a(2)  <---------------AtSPL8                                                   --------->ARR11(3) --------->LBD16                                                           --------->GLK1(2) ---------ANAC55(2)                                      <-----------GT1   <---------AGP1 ---------ANAC46                                      <---------ANAC55(2)  <---------ARR11(3)     <-- -------->ANAC55(2)                                   --------->ANAC55(2)  <---------ARR14(2) ------- --------LBD16       <---------MYB46(3)       <------ZmHOX2a(2)            --------->ARR14(2)--------   ttacggagtacggaccccaagagttgttgatcatctccttgtttttggatcatcttatgtaaccatttgaaaacaaggatctgtttagaaaaagggaaag  15620900                                             <---------YAB1       --------->ANAC58         -------->P      --------->ANAC46                      <---------ARR11(3)    --------->ANAC58      --------->At4g35610      <---------ALFIN1  ----------->GT1   --------->ICU4     ------>ZmHOX2a(1)   <---------STY1(2) <-----------GT1      <---------ANAC58    <---------YAB1     ----------->HVH21   --------->STY1(2) -------MYB46(3)      <---------ANAC58  --------->YAB1  <------MYB46(1)         --------->ANAC58 -->DAG2        <-----------GT1      <-----------GT1    <------MYB83            --------->ANAC46 -->DOF2       <---------YAB1    <---------TOE2(3)     --------->MYB59          --------->ANAC58   tggttaccacacagtttattactagcgagttatttgatgttaccatgatttttgcattaggtcctgaccagcactaacttacaagctagtagctaccata  15621000            <-----------GT1                               --------->ARR11(3)        <---------AHL20(2)                                <---------AHL20(1)                ---------      --------->AHL20(2)                                  --------->AHL20(1)               <---------YAB1      <---------AHL20(2)                                --------->GLK1(2)                --------->YAB1    --------->CCA1(2)                         ------>ZmHOX2a(2)                         <---------YAB1   <---------ARR11(3)   <---------At5g28300 <---------ARR11(3)              <---------AHL20(2)   --------->ARR11(3)  <-----------GT1      --------->ARR11(3)              --------->AHL20(2)   tacaagatataaatttacttctaaattaccatgaagtgtttaagttgatcttactgagaatattttgagtttttttttttaaatctgaacatgataataa  15621100                                                                            --------->At4g35610                                                                --------->At4g35610                     <---------WRKY38(1)                        <---------At4g35610                     <---------WRKY45                         <---------ZAT14                 --------->DAG2                         <---------WRKY12    <---------ZAT2    <------                ---------->DOF2                         <---------WRKY45  --------->ZAT18   ---------             <----------ID1                             <---------WRKY38(1) <---------At4g35610         ---------->DOF2                            --------->DAG2 --------->ZAT14      -------------     <---------------AGL15               --------->ANAC46    --------->DOF5.7(2)----------->ARR10  --     ================================================================================================     --------------->AGL15       <----------DOF2  ---------->DOF2  <---------ZAT14      ------------- >YAB1 <---------YAB1<---------WRKY12    <----------ID1--------->WRKY18(1)<---------ZAT18   <--------   acaaaaactattaaagggaaaagtcaacgagaaccctttttaaacgaaaaaaaaaaggtcaacgtgaactgcagagtgagcttagatgttcccaaattcg  15621200                                                 --------->ARR11(3)                                                 <---------ARR11(3)                                           <---------ANAC46                                           <---------ANAC58      --------->TOE1(3)                    <---------ANAC58 -TEIL--------->TOE2(3)            --------->ANAC46 >ARR14(2)                         --------->ANAC58 ---->AGL1                       --------->LBD16<---------GLK1(1)                      --------->At5g28300 ------->YAB1          --------->LBD16 <------------CBF               <---------ARR11(3)     -------- =====MADS_MADS      <---------LBD16------------>CBF               <----------DOF2    ----------->GT1 ---->AG           <-----------GT1 --------->ANAC58    ------------>CBF      ------>ZmHOX2a(1) -ARR14(2)   ------------>CBF<-----------GT1    --------->GLK1(1) <---------ICU4------>ZmHOX2a(1) <--   ttcataaaccctaaattcaattttcccgatttatccccagcaattgtgtgatatcttctcaattctcatctttatcttcctccttacacagtaaaaaaaa  15621300       *TSS                    <---------CCA1(2)                              --------->YAB1 ->AHL20(2)           <----------DOF2                   --------->YAB1       <---------ATHB12 -----TEIL            <---------DAG2       <---------YAB1  ---------->DOF2 --------->WOX13(1)   tacgttgtctgattactacttacactttttctcaaatctatcgctacgattccttctctcataaagcctcccaaaatcaatcatagacaatctcattaac  15621400                                                                                                -----                                                                                             --------                                                                                             --------                                            ---------->DOF2                               ------>ZmHOX2a(2)           ------>ZmHOX2a(2)            <---------ANAC55(2)     <---------YAB1           <------ZmHOX2a(2)           ===========================HOX2a_HOX2a           <---------MYB52(1)          <---------ARR14(2)         <---------ARR11(3)           <---------AHL20(2) <-------TEIL                   --------->ARR14(2)         --------->ARR11(3)     ----------->GT1        --------->ARR14(2)          <---------LBD16<--  <---------ANAC46             <------ZmHOX2a(1)       <---------ARR14(2) --------->TOE2(3)  --------   agttttgtgttgatctctaactccatcgtcttaggagtaattaagtgaaagaacccaaattcgtttgtcatagaaaccacaatttcgagggatccacgca  15621500                                                                         --------->CCA1(2)                                                                        <---------ARR11(3)                                                                        --------->ARR11(3)                                                                      --------->ANAC58                                                                      --------->ANAC58      <---------MYB52(1)                                      --------->ARR11(3) -->TEIL                  --------->ANAC58                    <---------ARR11(3) ->ANAC58                 --------->ANAC58                   --------->GLK1(1)                      < ->ANAC58       <----------DOF2                              <---------GLK1(1)         <---------GLK1(2) --------DOF2--------->REM1(1)               ----------->GT1--------->ARR11(3)         <---------ARR11(3) ->ANAC46    <---------ALFIN1       <----------DOF2         <---------ARR11(3)  <---------ANAC46 <---   ctttcacagtttgctacactttcaaaacaagccctggtctttgaaattggtgaaaatgagtagatatctagcaagatatatggtgtctagatacttctct  15621600                                                                            --------->ANAC55(1)                                                                            ===============bZIP_DOF                                                                            --------->ANAC55(2)                                                                            <---------TGA1a                                                                            --------->ANAC46                                                                            --------->ANAC58                                                                            --------->ANAC58                                                                            --------->TGA1a                                                                            --------->O2                                             --------->ZAT2                 <---------O2                                         --------->ARR14(2)        --------->ANAC58                          <---------AtLEC2   <---------ZAT2        --------->ANAC58                     ------->MYC3        ------->TEIL         ----------->HVH21              <----------DOF2            <---------ARR14(2) <---------At4g35610              ------>ZmHOX2a(1)        --------->ZAT18      --------->At4g35610 <----------DOF2 ---------At4g35610  <-------MYC3      <---------ZAT18 --------->ZAT14    <---------ALFIN1<---------GLK1(2) ------At4g35610 <---------REM1(2)    --------->ALFIN1 <---------ZAT14 <-------TEIL    --------->YAB1   tctgcttcttcccgtcctttacacgtttgcatcgtcggaagtggacctgctggtttctatactgctgacaaggtacacacgtctttctctcatattctgc  15621700                                                                                <---------ANAC55(2)                                             <---------YAB1                     --------->ANAC55(2)                                           --------->YAB1               <------MYB83                                           <---------ICU4               ----------->GT1                                    --------->YAB1                      <------MYB46(1)                    <---------ARR11(3)    <---------ATHB51             <---------MYB46(3)                    --------->ARR11(3)    --------->ICU4              <---------ANAC58                    --------->ARR14(2)    <---------ATHB12            <---------ANAC46                    <---------ARR14(2)  --------->WOX13(1)            <---------ANAC58                    <---------GLK1(2)--------->TOE2(3)              <---------MYB46(3)      <-------TEIL         ------->TEIL          --------->AHL20(2)           --------->ATHB12   --------->MYB59      <   aaaatatagtgtatgtaaaccagattttgtgatttatatcatcaattatgactcttagctcgtgatttgatggctggtaatcaggtattgaaggcgcatg  15621800  Previous    Next  AGI:  At4g32350.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G79910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65537.1); contains InterPro domain Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061) Range:  from: 15617472    to: 15620916    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g32360.1    Description:  NADP adrenodoxin-like ferredoxin reductase. similar to GLT1 (NADH-dependent glutamate synthase 1 gene) [Arabidopsis thaliana] (TAIR:AT5G53460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65491.1); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class I; (InterPro:IPR001100); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; (InterPro:IPR001327); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040); contains InterPro domain Adrenodoxin reductase; Range:  from: 15621307    to: 15624929    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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