Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          ------>ZmHOX2a(1)                                                       --------->TOE2(3)                                                       --------->TOE1(3)                                               <---------ICU4                                               --------->ATHB12                <---------WOX13(1)            --------->ICU4              --------->ATHB12              --------->YAB1           <---------ANAC58             <---------ARR11(3)      <---------ANAC58                  --------->ARR11(3)      <---------ANAC46                 --------->At4g35610      <---------ANAC58          ------>ZmHOX2a(2)     ------>ZmHOX2a(2)   --------->GLK1(1)            ===============================HOX2a_HOX2a   <---------GLK1(1)     --------->ATHB12 --------->ARR11(3)  <---------ARR11(3)    <---------YAB1 <---------At4g35610                            <---------ANAC46  --------->ARR11(3)  <---------ANAC55(2)--------->GLK1(1)                         --------->TOE2(2)  <---------ARR14(2)  --------->ANAC55(2)<---------GLK1(1)                       ------->TEIL      -- ->AGL15   <---------ANAC58   --------->ARR11(3) <---------WOX13(1)           <---------YAB1   <----- --AGL15   <---------ANAC46<---------WOX13(1) <---------YAB1               --------->ICU4--------->ZAT18   agaagatatcgtggagtgattgatatgtgattgatctagtcagatatcatgattgatccttaacaacttatatagtagttatgaatctacgtgaactatg  15617100                                                                                                 <---           --------->LBD16                                                                       <---           ----------->GT1                                                                      <----         <---------LBD16                       --------->TOE1(3)                                <----       --------->ARR14(2)                      --------->TOE2(3)                              <------       <---------ARR14(2)                    <---------YAB1                             <---------ARR14(2)      <---------GLK1(1)                     --------->ARR11(3)                          --------->ARR14(2)      --------->GLK1(1)                     <---------ARR11(3)                       --------->ANAC46  ----------->RAV1(1)                   <---------AtLEC2      <-----------GT1        --------->ANAC58 ------->CCA1(2)  <-----------GT1 <---------YAB1------>ZmHOX2a(1)<---------DAG2      --------->ANAC58 ----TOE2(3)<---------MYB52(1) <----------DOF2------>ZmHOX2a(2)  <----------DOF2---------->DOF2<-----   gatacaacatatccggtatatttctatacatctcttttgaatgcatgatccttaacatcggttttcactttttcacttgaagaaaagacgaaaccgcgtc  15617200                                                                     --------->ANAC46                                                                    --------------->AtSPL3                                                                  ------>NtERF2                                                                 <---------ALFIN1                                                                 --------->DEAR3(1)                                                                --------->ATERF1(1)                                                                --------->MYB46(3)                                   --------->ANAC58            <---------ATERF1(1)                                   --------->ANAC46           --------->TCP20                                   --------->ANAC55(2)        --------->TCP16(1)     --------->AHL20(2)           <---------LBD16          --------->ALFIN1             --------->MYB46(3) ------MYB46(3)                 --------->ETT(2)        <---------TOE2(3)              --------->ANAC46 ------DEAR3(2)                 <---------WRKY12        --------->DAG2                 --------->ANAC58 -----DEAR3(1)       <---------WOX13(1)                 <---------AtMYB61     <------ZmHOX2a(2) -----At1g77200    --------->ATHB12--------->ANAC58     <---------TOE1(3)    <---------ARR11(3) -----HVH21       --------->AHL20(2)                --------->At4g35610      --------->ARR11(3)   <-- -NtERF2          <---------AHL20(2)                <---------At4g35610 --------->SPL7 --------->ANAC58   ggtgagtttaaattatctcattaattggtgcaggtctacggaatccatggaatgagctaaggtggagccacccgtaccagatcatttccacccaattccc  15617300                                                                                               ------                                                                                              -------                                                                                         --------->TOE1(3)                                                                                         --------->TOE2(3)                                                                                       <---------TOE2(3)                                                                                       <---------YAB1    -------->P                                                                      --------->DOF5.7(2)   ------->GAMYB                   <---------ALFIN1                                --------->TOE1(3)  <---------MYB55(2)              <---------ALFIN1   --------->ATHB51              --------->TOE2(3)  <---------MYB111(2)            --------->LBD16    <---------YAB1         <----------DOF2 --------->AHL20(2)  --------->MYB46(3)     <---------WOX13(1)---------->DOF2            <-----------GT1 <---------DOF5.7(2)  <---------MYB111(1)  --------->ATHB12  ------>ZmHOX2a(1)       --------->LBD16 <---------TOE1(3) -------MYB52(2)      <---------YAB1    --------->TOE2(3)   <---------GLK1(1)    <---------TOE2(3)---   actaacaaccagatggtattagatttgattgattccccaactccttaaagacacattattgtatttccgaaaataccctttataacgttaacattaaaaa  15617400                                                       --------->AtMYB61                                                       <---------ALFIN1                                                      --------->MYB46(3)                                                    --------->DEAR3(1)                                                    --------->AtMYB61                                                    <---------ALFIN1                                                   --------->MYB46(3)                           --------->ANAC58      --------->AtMYB61               <---------RAP2.6(2)                           --------->ANAC58      --------->DEAR3(1)             <-------TEIL                         ---------->DOF2         <---------ALFIN1               <---------LBD16                      <---------HSFB2a(2)       --------->MYB46(3)           --------->At4g35610                      --------->HSFB2a(2)     --------->DEAR3(1)           <-----------RAV1(2)                      --------->HSFC1(1)      --------->AtMYB61          <-----------HVH21                      <---------HSFC1(1)      <---------ALFIN1          *TSS <---------At4g35610                  <----------DOF2            --------->MYB46(3)        --------->ZAT2<---------DAG2 --->DAG2        <---------ANAC58          --------->AtMYB61           <---------At4g35610 --->DOF2        <---------ANAC58          <---------ALFIN1            --------->At4g35610         -- -------->GT1 <---------MYB52(1)        --------->ANAC46           <---------ALFIN1  <----------DOF2-   gtgtcaaaacgaagtcgtttctttcgagaaagcactctgaatacaccaccaccaccaccaccatgttctccacagcttcagatgcggctttttgaataca  15617500                                    <---------TOE1(1)                              <---------MYB52(1)                  ------>MYB83     <-------TEIL                                --------->MYB52(1)                  ------>MYB46(1) --------->CCA1(2)      --------->TOE1(2)     <---------At5g28300              --------->MYB52(1) --------->ARR11(1)    --------->GLK1(2)       -------->P             --------->MYB52(1)  <---------ARR14(2)    --------->ARR14(2)   --------->At4g35610            --------->MYB46(3)   --------->ARR14(2)    <---------ARR14(2)  --------->ANAC58 ------->AHL20(2) --------->MYB52(1)<---------TOE2(1) <---------GLK1(2)    --------->ANAC58 --------->DOF2 ------->GAMYB   --------->CCA1(2) <---------LBD16 <---------ANAC46<-------GAMYB   aataaagagagagaacaaccgaacagagaataagagatacgaggtgatcactctcggaatctgggattttgtgtaataagctaccgttaagttgattttc  15617600                      --------->MYB52(1)                       <---------GLK1(1)                <---------ARR14(2)                            --------->ARR14(2)                --------->ARR14(2)                            <-----------ARR10              --------->LBD16                                 <---------ARR14(2)             <---------ANAC58                               --------->LBD16             <---------ANAC58                              <------NtERF2             --------->ANAC55(2)                          --------->At4g35610             <---------ANAC55(2)                          <---------At4g35610             <---------ANAC46                             <---------LBD16            <---------LBD16                               --------->LBD16        <---------MYB46(3)          <---------ARR11(3)    ------>NtERF2        <---------REM1(1)       ---------->DOF2           <------NtERF2        <-----------RAV1(1) <------ZmHOX2a(2)<---------MYB46(3)--------->GLK1(1)       <----------DOF2 <---------TOE2(3) --------->YAB1   --------->ARR11(3)  <---------DEAR3(1)        ---------->ID1 <---   atcaacgttgttgttgcggaatcgtaacagatcaaaaagatgtttgatggtttcttaggccgcggatttgctcccaaggggtttgtcatctttctccatc  15617700                                                     --------->AHL20(2)                                              <------------MYB.PH3(1)                                            --------->MYB52(1)      <---------YAB1    --------->TOE1(2)               --------------------->WRI1  <---------YAB1           --------->YAB1 -------DOF2 <-----------GT1        <----------DOF2  <---------AHL20(2)             --------->MYB46(3)   tttattcatacgatttatctctctcaccttcaatttctctttgggttaaccgattttaaatgtgtgatttttgattcgaccagaaaaccactgataaaac  15617800                                                                                        --------->WRKY18(1)                                                                                      ------->GAMYB                                                                                    <---------At5g28300                                                                                   <---------DOF5.7(2)                                                                                   --------->MYB52(1)                                                                                --------->TOE2(3)                                                                               <--------HAHB4                                                                               <---------ICU4                            <------ZmHOX2a(1)                                 --------->ICU4             ======================HOX2a_HOX2a                                <---------YAB1             ------>ZmHOX2a(2)                                            ------>ZmHOX2a(2)            <------ZmHOX2a(2)                                            <---------At4g35610            =======================HOX2a_HOX2a     --------->GLK1(2)    --------->ARR14(2)      <----           --------->ARR14(2)  --------->DAG2  --------->DAG2           <-----------ARR10  --------->ICU4           <---------ARR14(2) ---------->DOF2 ---------->DOF2           <---------ARR14(2) <---------YAB1      --------->GLK1(2) --------->LBD16   <---------YAB1            <---------At4g35610<-----------HVH21     <---------GLK1(2)<---------LBD16  --------->TOE1(2)        --------->CCA1(2)--------->DOF5.7(2)   tgactaagaatcggatcgatgttctccggaggaaaaggaatgctacgataaagtttctgaagagagatttggctgatctgatcattaacggtcatgacta  15617900                                    <----------DOF2            --------->ARR14(2)                                    <---------DAG2    <---------WOX13(1)                                   <---------ANAC58 --------->ATHB12      <---------YAB1                                   <---------ANAC58<---------YAB1     <---------WOX13(1)                            ------>ZmHOX2a(1)    --------->CCA1(2) <---------YAB1                     <---------ANAC58         <---------TOE2(3)<---------ARR14(2)   <----------DOF2   <---------ANAC58         <---------TOE1(3)<---------GLK1(2)            <-------TEIL -----ZAT14   <--------P ---------->ID1  <----------DOF2--------->ATHB12--------->ATHB12<---------YAB1   caatgcttttagcagggtagttttcttgtcctgttttgcttttcttttaagatttgattgattcggattttgaatgatttttgtattgttttgatacatc  15618000  Previous    Next  AGI:  At4g32350.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G79910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65537.1); contains InterPro domain Protein of unknown function DUF292, eukaryotic (InterPro:IPR005061) Range:  from: 15617472    to: 15620916    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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