Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             <---------ANAC58                                                       <---------ANAC58                <----------DOF2                <---------AHL20(2)             <---------ARR14(2)                <---------ICU4             ------->TEIL                     --------->ICU4             <---------ARR11(3)               --------->AHL20(2)             --------->ARR14(2)          ----------->GT1   <---------ANAC58                  -------- ---->ICU4  <---------CCA1(2)   --------->MYB52(1)     <---------ANAC58                      --------   gaataagtagtagtgtatcttttagtgtatagaataactgaatgagtaataaatactgcttgcttcataacataagtttttggcatccaaaacaacctag  15615800                                                     <---------ANAC58            <------NtERF2                                                     <---------ANAC58          <---------ANAC58                                                     <---------ANAC46          <---------ANAC58                                          --------->MYB59                  ---------->DOF2<---------ARR14(2)                         <---------At5g28300    <---------ZAT6            ---------->DOF2--------->ATHB12                        <-----------GT1--------->ARR14(2)              <------ZmHOX2a(2)<---------YAB1                   ---------->DOF2     <---------ARR14(2) <---------At4g35610  <---------ANAC46 ->TOE2(2)       --------->YAB1    <-----------------AG   --------->At4g35610 <---------LBD16 ->TOE1(2)   --------->KAN4(1)     <-----------------AGL1<-----------RAV1(1)--------->DAG2--------->ARR14(2)   gccttagaagttagaacattcaaaagttaccatggtttacaaattcggtagagttgcttgtgctgcattggggatcaaaaggcgggtttgaagattggga  15615900                                         --------->LBD16                                        <-----------RAV1(2)                               <---------ANAC58                               <---------ANAC58                              ------->TEIL                           --------->ANAC58                           --------->ANAC55(1)        <---------REM1(1)                           --------->ANAC55(2)      --------->At4g35610              <---------TOE1(2)                           <---------ANAC55(2)   ----------->RAV1(2)               <---------ANAC58                           --------->ANAC46      --------->At4g35610               <---------ANAC58                           --------->ANAC58      <---------At4g35610           <----------DOF2   ----------->GT1   <-----------HVH21  --------->HSFB2a(2)                 <---------ARR11(3)   --------->YAB1   <---------CCA1(2)   <---------HSFB2a(2)    <---------ARR11(3)  <---------ANAC46 <   ctgaatcgttatattgtggtccatatcacacgtacttgtgctccagaagtcatctgatgaagcactatctttcttcactatctttccttggattttgagt  15616000                                                                                                 <---                                  <----------DOF2    --------->LBD16                         --------                              --------->ANAC58      --------->ANAC46                         --------                              --------->ANAC46 <---------At4g35610                           <-------                              --------->ANAC58 --------->At4g35610                           <-------                    --------->HSFB2a(2)  <-------GAMYB                    --------->ATHB12  <-------- ----------DOF2     <---------HSFB2a(2) <-----------RAV1(1)          ----------->HVH21    --------->WOX13(1)   ccctttgatggctcatcgacttccacaactaaacgcctttctctgttgcagcatccgaaacagtttatgctctgaaagattgaacattatgtcaatcatt  15616100                                             <------MYB83  <---------YAB1                             <------MYB46(1) ------MYB46(3)                       <---------ATHB12    --------->At4g35610 ->ATHB12                        --------->ANAC58         <---------At4g35610 ->YAB1                ------>ZmHOX2a(2)    --------->MYB59 -HAHB4         XXXXXXXXXXXXXXXXXXXX>MIR862-3P         <-----------HVH21 --ICU4        <---------YAB1  ---------->DOF2       --------->LBD16                             ---- -ATHB12      <---------AHL20(1) --------->ANAC58  <---------LBD16 --------->YAB1        ------>ZmHOX2a(2)   tgttactatggtctaatatgtttgatctacttggaaagaaatcaatttggttctccgggtcgctcacattgatgagagttttgcaatttgatcgtagaga  15616200                                         <------------CBF                                      <------NtERF2                                     --------->LBD16                                     ------>NtERF2                                    <---------ANAC46                                    --------->LBD16                                    <---------LBD16           --------->DAG2          <---------ANAC46          ---------->DOF2          <---------LBD16       --------------->AGL15      ------>NtERF2       <---------------AGL15      --------->MYB52(1)      ----------------->AGL1   <---------At4g35610                        <------------CBF      ----------------->AG     --------->ZAT2             --------->MYB46(3)  <---------MYB52(1)           <---------ZAT2    ---------->DOF2    <XXXXXXXXXXXXXXXXXXXXMIR867  ---- ----->GLK1(2)                 --------->At4g35610      ----------->RAV1(1)                     -----   ttccattagccaaaaagggagagtttggaagtaagctgccgggaattggaagaaagagcaacaacgcttcttactaaattgtgttcgtaattttagcaag  15616300                                                                                                   --                               ----------->HVH21                                                   --                             <---------ANAC55(2)     ------->TEIL                    <---------GLK1(2)                             --------->ANAC55(2)   --------->YAB1      <------ZmHOX2a(1)           <-                      --------->STY1(2)       ------------>CBF       <---------TOE2(3)      --------- ----->YAB1           <---------STY1(2)  ---------->DOF2             <---------TOE1(3)      --------- ---->ICU4        --------->STY1(2)  <------ZmHOX2a(1)    ---------->DOF2        ---------->DOF2  ---   aatgaataacaagaacacatagctagctaatacatgacaggacaaaagcacaatgaacatgaaagagaattaaggaaactcaaaaaagattagcaaggaa  15616400                                                                                                   --                            --------->YAB1                                                         <- ----------->GT1      --------->AtLEC2                                                             <- ------->ZAT18        --------->ANAC58                                                            --- ------->ZAT14        --------->ANAC46                                       --------->ANAC58  ------ --------ZAT14        --------->ANAC58                                       --------->ANAC58  ------ >ANAC58         ----------->HVH21            ---------->DOF2            --------->ANAC58     ------- >ANAC58       --------->At4g35610    ---------->DOF2                    --------->ANAC58     <------ ------>ALFIN1 <---------At4g35610 ------->TEIL                          --------->ANAC46    <-------   gtgtagtaatatgcctcatatgacaagcaaacatatgcatttaagcacaaaaggaatccatatgttataacttacaagcaagtaaggcatattatgccgc  15616500    <---------ANAC55(2)    --------->ANAC55(2)  <-----------GT1  --------->AHL20(2) ------->ATHB51 -------HAHB4 --------ICU4 ------>ICU4                                                                   --------->ARR11(3) --->LBD16                                                                     --------->GLK1(2) >NtERF2                                                                      <---------GLK1(2)     - -->RAP2.6(2)        <---------------AtSPL8                             <---------AHL20(2)      ----- ---ANAC46    --------->TOE2(3)         --------->ZAT14             --------->ATHB12  ---------->DOF2 --LBD16   <-----------GT1              <---------ZAT14   <-------TEIL --------->AHL20(2)   ---------   ataattacatattttaccttgatttagtacaaagtctgtctctgaactgaagcacatatatacatccacatgatttaatagaatcttgaaaagaattcaa  15616600                                                            <---------ICU4                                                            --------->ATHB51                                                            <--------HAHB4                                --------->MYB52(1)         --------->ICU4                               ---------->DOF2             <---------YAB1                              --------->MYB46(3)         --------->YAB1                           ---                            <---------------AGL15        <---------ICU4                         <----          ---------->DOF2   ----------->RAV1(1)          <--------HAHB4                       ------- --------->DOF2          ------>MYB46(1)           <<<<<<<<<TAC1 <---------ANAC46             ------- ----->DOF2       <-----------GT1       <---------ZAT6  <------ZmHOX2a(2)<---------AHL20(2)   ------- --------------->ANAC81  ------>MYB83   ----------->GT1 <---------ATHB12--------->AHL20(2)    -------   aagaaagaaaacaaaagtttaaacaccttccaacaaagggtattgttaaaaacactcgatcattattacgttgattttatatttcttctcttcttcacgt  15616700  Previous    Next  AGI:  At4g32342.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G25360.1); similar to unknown [Populus trichocarpa] (GB:ABK93715.1) Range:  from: 15615190    to: 15616206    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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