Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <---------MYB46(3)                                                                --------->TOE1(2)                     --------->ARR14(2)                       <---------TOE2(3)                  ----                     <---------ARR14(2)                       <---------TOE1(3)        <xxxxxxxxxxxxx                    <------ZmHOX2a(1)                   --------->LBD16              <-----------GT1            <---------------AGL15                      <---------LBD16   <---------CCA1(2)    -------           --------------->AGL15                      <---------LBD16 <------ZmHOX2a(2)--------->MYB46(3) -------->GT1     <---------TOE2(3)         <------ZmHOX2a(1)<---------DOF5.7(2)     --------->YAB1 < --ZmHOX2a(1) <----------DOF2               =================================HOX2a_HOX2a------->GAMYB   agattaaaacaaacctctttgaggaaacgagcgtagttagagagaaggagagtgtctccgggataacgttggatcatctcttcgtaataaccatctacgc  15613900                         <---------ATERF1(1)                         ------>NtERF2                         --------->LBD16                     --------->DEAR3(1)                     --------->AtMYB61                     <---------ALFIN1                    <---------ZAT2                   <---------ATERF1(1)                   ------>NtERF2                  --------->DEAR3(1)                  <---------ALFIN1                <-----------HVH21                <---------ATERF1(1)                --------->ABI4(1)               --------->ANAC46               --------->ANAC58                                                            --------->HSFB2a(2)               ------->GAMYB                                                               <---------HSFB2a(2)               --------->RAP2.6(2)                                                      ------>ZmHOX2a(1)               --------->DREB2C(2)                                                    <---------HSFC1(2)               --------->ANAC58                                                       --------->HSFB2a(1)               --------->DEAR4(1)    --------->LBD16                                  --------->HSFC1(2)               --------->DEAR3(1)    ------>NtERF2 --------->ARR14(2)                 <---------HSFB2a(1)              --------->MYB46(3)    --------->ANAC46       <---------MYB52(1)         ------>ZmHOX2a(2)             <---------ATERF1(1)    --------->DEAR3(1)    <-------GAMYB              <------ZmHOX2a(2)         --------->AtMYB61       --------->ARR14(2)<---------ARR14(2)               <---------ARR11(3)      <---------ALFIN1  --------->ANAC46          ------>MYB46(1)--------->HSFC1(2) --------->ARR11(3)   --------->AtMYB61--------->ZAT2 <---------LBD16------>MYB83   <---------HSFC1(2) --------->ARR14(2) ----->PCF2 <---------ALFIN1------>NtERF2       --------->AtMYB61<---------HSFB2a(1)<---------ARR14(2) xxxxxxxxsmallRNA(si3) <---------LBD16       --------->AtMYB61   --------->HSFB2a(1)--------->AGP1 -->ANAC46  --------->AtMYB61 <---------ALFIN1  <---------MYB111(1)                <---------GLK1(1) ---------ALFIN1------>NtERF2<------NtERF2  --------->MYB46(3) --------->ARR14(2) ----------->ARR10   tcccacctccacctccaccgccacctccggcaccatctccgcctctaccaccaaatccaccgttggaacctccttgggggagtcgagatccttccaaaac  15614000                                                             ------->TEIL                          --------->ANAC46             ------>NtERF2            --------->ARR14(2)                        --------->DEAR3(1)            <---------ARR14(2)                      ------>NtERF2                        <---------ARR11(3)           <---------MYB52(1)                       --------->LBD16            ----------->RAV1(2)        <------NtERF2  <---------ARR14(2)           <---------ATERF1(1)        <---------At4g35610       ------>NtERF2   --------->ARR14(2)          <---------DEAR3(1)    --------->GLK1(1)      --------->ANAC46<----------TaMYB80          <---------LBD16     <---------TOE2(3)  --------->ARR11(3) ---------->DOF2      --------->CCA1(2)  <---------MYB52(1) <---------GLK1(2)  --------->At4g35610   cctcaaagacgccgtttcttcgtgatatacgctgatggttttcgttatgctctccggcgactgaatcttgtagaggtttccatctgaagaagctcttgta  15614100                                                                                          <---------TOE2(3)                                                                                     <------MYB83                                                                                     <------MYB46(1)                                                                                    <---------TOE2(2)                                                                                    <---------TOE1(2)                                                                                   <--------P                                                                                 <---------ANAC46                                                                              <------NtERF2                                                                              --------->ATERF1(1)                                                                             <---------RAP2.3(1)                                                                             <---------ORA47(2)                                                                             <---------DEAR3(2)                                                                             <---------RAP2.6(1)                                                                             <---------ERF1                                                                             ------>NtERF2<---------TOE1(3)                                                                             <---------ATERF1(1)                                                                             <---------RRTF1(1)                                                                             <---------DEAR4(2)                                                                            <---------RAP2.3(3)                                <---------DEAR3(2)                          <---------RRTF1(2)                                <---------HSFC1(2)                          <---------RRTF1(3)                                <---------HSFB2a(1)                         <---------RAP2.3(2)                                --------->HSFC1(2)                          <---------ATERF1(2)                             ------------>AtMYB77   ------>MYB46(1)         --------->ATERF1(2)                        <---------ZAT2              ------>MYB83            <---------DEAR3(1)                        <---------At4g35610       <---------ALFIN1          <---------RAP2.6(2)                        --------->At4g35610      --------->MYB46(3)        <---------ABI4(1)                        --------->ZAT2      <---------MYB46(3)          <---------HSFB2a(2)                       ----------->RAV1(1)--------->LBD16               --------->HSFB2a(2)                     --------->At4g35610 <---------ANAC58       <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <-                 --------->ALFIN1        <---------ANAC46    --------->DEAR3(2) ------>NtERF2      --                <------ZmHOX2a(1)        <---------ANAC58    --------->MYB46(3)<---------ANAC46    --        ----------->RAV1(1) <---------ARR14(2) <-----------GT1 --------->MYB52(1)<------NtERF2<------   atcggtttagcaacacgaggagtagcagcagagacggttcgagccgtggttaccacccttggaacagacggtttctgggcggcgcgtaggttaaggtcca  15614200                            --------->ARR11(3)                              <---------RVE1(1)                        <---------MYB52(1)                                  <---------CCA1(1)                   --------->ATHB12                                        <---------ARR11(3)                   --------->YAB1                                          <---------AHL20(1)  <-----                   <---------ICU4       <---------KAN4(2)                  --------->AHL20(1) ------- --------ZAT14    <---------YAB1  <---------ANAC46                         --------->ARR11(3) <------ ------->REM1(2)<---------ICU4<---------ANAC58                    --------->CCA1(2)          -------- ------->ZAT14 --------->ICU4 <---------ANAC58        <------ZmHOX2a(1)---------->DOF2       -------- -TEIL      <---------YAB1--------->MYB52(2)     --------->ALFIN1 --------->At4g35610----------->GT1   gtgaagacgcgcttctcattatcattgttagttcttgtggggaatatttcagtggaggaagagaagagagatgaaaagatatttagactgcaaaaatatc  15614300                   --------->ANAC58                   --------->ANAC58           *TSS<-----------HVH21        --------->LBD16   <---------ALFIN1      <---------LBD16     --------->ANAC46    --------->GLK1(2)--------->PCF2    --------->ARR14(2)  <---------ALFIN1    <---------ARR14(2)  ----------->RAV1(1)                          <---------YAB1                 < ----YAB1<---------MYB52(1)                                        --------->YAB1         <---------ICU4 -->ARR11(3)<---------ANAC58                    <------------CBF  <---------YAB1          <--------HAHB4 ---ARR11(3)<---------ANAC58             <---------YAB1          <-----------GT1          --------->ATHB12 ->CCA1(1)--------->ARR14(2)          --------->ICU4            <-----------GT1<---------ALFIN1------ ->RVE1(1)<---------ARR14(2)       ------------>CBF      ---------->DOF2  <---------MYB46(3)   <-----   atggagtttccggttcttgtcaagccccacactattagtcaatattatcaaattgaccccaaagttttatcatttttggttacacccttgcatcattaca  15614400                                                              --------->ANAC58                                                              --------->ANAC58                ----------->GT1                        <-------TEIL           --------->TOE2(3)                          --------->ARR14(1)           --------->TOE1(3)                          --------->CCA1(2)     --------->YAB1           --------->YAB1         <---------ARR14(2)   --------->AtLEC2        --------->YAB1            --------->ARR11(1)      <---------STY1(2) -------TEIL--------->DOF5.7(2)                 <----------DOF2              --------->STY1(2) --->ANAC55(2)  --------->YAB1----------->GT1   --------->TOE2(3)     ---------->DOF2  --------->AHL20(2) ----ANAC55(2)<---------DOF5.7(2) ----------->GT1    --------->ARR14(2)  ------------>MYB.PH3(2)<----   tgttcattcaaaacgttatcgtaatacaagaatagtaagttaatctctaactttagatacgagaacgaaactaaaagctagttagcaaataaaacatttt  15614500                                                                                     <---------KAN4(1)                                                                                     --------->KAN4(1)                                                                                     --------->HSFB2a(1)                                                                       <---------YAB1<---------HSFB2a(1)                                                                     <---------GLK1(1)                                                                    <---------ARR11(3)           ----                                                           --------->YAB1 <---------YAB1    <--------                --------->ANAC58                           --------->TOE2(3)         <---------MYB46(3)   --------->ARR14(2)                                    --------->ARR11(3)         <---------KAN4(2)   <---------ARR14(2)               <----------DOF2      <---------ARR11(3)    <---------LBD16   <--- -----YAB1      --------->ANAC58   <---------DAG2--------->TOE1(2)  --------->ARR11(3)--------->KAN4(2)   gaaagtatttgcattatcaggccaaaaacataagtagccttttctgtaaattctacgactatcttaactagatatcatttttggggattgttcccttatt  15614600                                                                                      <---------WOX13(1)                                                                                    --------->ATHB12                                                                        --------->AHL20(1)                                                         --------->ARR14(2)        <---------YAB1                                                         <---------ARR14(2) <-----------GT1     -----         <-----------ARR10                      --------->YAB1          <---------AHL20(1)   --------        <---------CCA1(2)                     ----------->RAV1(1)       --------->ARR11(3)   <------- ----->AHL20(2)                              --------->AtMYB61          <---------ARR11(3)   -------- -MYB52(1)                   <---------YAB1 --------->MYB46(3)       --------->AHL20(2)     <-------- ------AHL20(2)            --------->YAB1 <------ZmHOX2a(1)      ---------->DOF2   <---------AHL20(2)   tatatatatcaaatcttatcggaaaacaattgttataggcttcaggaccaccataatcgaatacccctaaagaaaatatttcaatttgattggctacgga  15614700     --------->ANAC58     --------->ANAC58 --------->ANAC55(2) <---------ANAC55(2) --------->ANAC58                                                                              ------ --------->ANAC58                                                                            <------- --------->ANAC55(1)                                                                         -------- ----->DOF2                                                                            --------->YAB1 ->ANAC58                           ----------->RAV1(1)                           --------->ICU4    - --ANAC55(2)          --------->GLK1(2)           <---------DAG2                  <---------YAB1    - ->ANAC58      <------ZmHOX2a(2) --------->PCF2<-----------GT1                 --------->WRKY18(1)  - -LBD16 --------->MYB52(1)      <-----------HVH21 <----------DOF2             <-----------HVH21------   aagacgtaagtaactggatcaaagaatttgattctgtcccacaaataagttactttttgcattcttgaacttatttccacggtcatgagtcatgaccaaa  15614800  Previous    Next  AGI:  At4g32340.1    Description:  binding. similar to binding [Arabidopsis thaliana] (TAIR:AT1G80130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65683.1); contains domain PTHR23083:SF23 (PTHR23083:SF23); contains domain PTHR23083 (PTHR23083); contains domain SSF48452 (SSF48452) Range:  from: 15612590    to: 15614311    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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