Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          ------>ZmHOX2a(2)                                                                      <---------ARR11(3)                                                                      --------->ARR14(2)                                                                      <---------ARR14(2)                                                                      --------->ARR11(3)                                                                      <---------AGP1                                                         <---------ANAC58                                                         <---------ANAC58                      ------                                                        --------------->AtSPL8         --------->KAN4(2)                                          ------>ZmHOX2a(1)     --------->ATHB12       --------->ARR14(2)                                          =====================================HOX2a_HOX2a-----------                                         --------->TOE2(3)  --------->SPL7             <---------ARR14(2)                                   <-----------GT1      <---------------AtSPL3        <---------KAN4(1)   ----------->RAV1(2)          <---------ZAT6          --------------->AtSPL3       ------->TEIL <-----------GT1              <---------ANAC46     <---------YAB1    <---------CCA1(2)--------->KAN4(1)   gtatcacctgtttttggtatagactattggttttgtgttacttcctaaactatatgatttcgtacttcattggatcttatagagatgaatattcgtaaaa  15583000                                                                                  <---------YAB1                                                                                --------->YAB1                                                                             <---------ICU4                                                                             --------->ATHB51                                                                             <--------HAHB4                                                                             -------->HAHB4                                                                             --------->YAB1                                                                             <--------ATHB1                                                                            <---------YAB1                                    <---------ANAC46                        --------->AHL20(2)                                    <------MYB46(1)                         --------->ICU4                                    <------MYB83                            <---------ATHB51                                   <---------MYB46(3)                     --------->YAB1                               --------->ICU4                           <---------ARR11(3)                               <-----------RAV1(1)                     --------->YAB1                        --------->ZAT14                               <---------YAB1 ------>ZmHOX2a(1)                   <---------MYB52(1)                                 <---------TOE1(3) ---->DOF2       ----------->GT1   --------->MYB59        <---------YAB1--------->ARR11(3) >GT1     ----------->GT1    --------->YAB1   <-----------GT1         <---------TOE2(3)   agataagttatctggtgaaacgttacttcagtcatgttgggtctagatttacatactactatgaaacattttaagataataattatcctagccaactata  15583100                      --------->CCA1(2)               --------->AHL20(2)           <---------ICU4                     <---------ARR14(2)              <---------AHL20(2)            --------->YAB1                     <---------ARR11(3)              --------->AHL20(2)            --------->ATHB12                     --------->ARR11(3)        <---------TOE2(3)                  --------->ICU4           <----------ID1                     <-----------GT1                    <---------WOX13(1)      <---------AHL20(2)        ---------->DOF2<---------TOE1(3)       <---------YAB1<---------YAB1   tgttctatattatgggccaagaagatatagaactaaaagttcagaatttaacgatataaattactagtatattctaatacttgaatgattactgttttag  15583200                            <---------YAB1                        <-------GAMYB                       <------MYB46(1)                       <---------MYB46(3)                       <------MYB83                                    --------------->AtSPL8                      <---------AtMYB61                                <---------------AtSPL8                     <--------P<-----------GT1                      --------->AHL20(2)                   --------->ALFIN1                              <---------ANAC55(2)                 <---------ANAC58                            <-------GAMYB          --------->AHL20(2)                 <---------ANAC58                       <---------ANAC58           <---------YAB1                 <---------ANAC46                       <---------ANAC58          --------->AHL20(2)                 <---------ANAC55(1)                    <-----------RAV1(1)------->TEIL       --------->AHL20(2)   <---------TOE2(3)           <---------ANAC46   <-------TEIL  <-------TEIL   ttgtttagaataaatagtagcgtgttggttaagataccatctatccacatctatatttgtgtgggttacataaaatgtacataatattatatacatatat  15583300                                                                             --------->ARR11(3)                                                                             <---------ARR11(3)                                                                             --------->ARR14(2)                                                                         --------->YAB1        ------                                            <---------ALFIN1             <---------ICU4       <------                    --------->AHL20(2)     <------NtERF2   ----------->TBP <---------YAB1    --------                    <---------ARR11(3)    ------>NtERF2  --------------->AGL15               *TSS                    --------->AHL20(1)   --------->RAP2.3(3)      ====================HOX2a_HOX2a              --------->ANAC58      <---------At4g35610  <---------------AGL15               --------              --------->ANAC58      --------->At4g35610 <-----------------AGL2              ---------            ---------->DOF2     <---------WRKY18(1)     ----------------->AGL3            <---------At4g35610        <---------YAB1         ----------->HVH21        ----------------->AGL2   ------>ZmHOX2a(1)    <---------AHL20(2)  <-----------GT1------>NtERF2    <-----------------AGL3 ------>ZmHOX2a(2) ------->TEIL--------->DAG2    --------->WRKY12    <----------DOF2<------ZmHOX2a(1)       -----------   atgtatatttttgataaagccatatattactccttgacctctgcccccatttccttttactataaataggaatactcatgatcctctaattcagcaatca  15583400     ------->GAMYB    <---------MYB52(2)    --------->MYB46(3)                                                    --------->TOE2(3)    <---------MYB55(2)                                                  ------>NtERF2   ------>MYB83                                                      --------->At4g35610   ------>MYB46(1)                ---------->DOF2                    --------->ZAT2  --------->MYB52(1)             <---------AHL20(2)                  <---------At4g35610 --------->AtMYB61               --------->AHL20(2)                  --------->HSFC1(2)      ------>ZmHOX2a(2) --->YAB1                    <---------ATHB51                        <---------HSFC1(2)    --------->ARR14(2) ---ATHB12             --------->ANAC58                              <---------ZAT2        <---------ARR14(2) ->ANAC58              --------->ANAC58   ---------->DOF2            --------->HSFB2a(1)   --------->ARR11(3) ->ANAC58            ---------->DOF2 <----------ID1         ---------->DOF2                <---------ARR11(3) >WOX13(1)     <----------DOF2--------->YAB1           <-------TEIL  <---------HSFB2a(1)   <---------AGP1 ->CBF        <---------DAG2 <---------ATHB12  <----------DOF2      ------->TEIL          <---------CCA1(2)   acaccaacgaacacaaccttttccaaagccaataataaaagaacaaaagcttttagtttcatcaaagacgaagctgccttagaaatggagttggatcttg  15583500                                                                              <---------ANAC46                                                                              <---------ANAC58                                                                          <---------At4g35610                   <---------ARR11(3)                 --------->ANAC58    <---------ZAT2                   --------->ARR11(3)          --------->TOE2(3)          --------->At4g35610           <---------At4g35610             --------->WRKY38(1)            --------->ZAT2 <---------ANAC58           --------->ANAC46                --------->WRKY12       <------ZmHOX2a(2)     <------------         <-----------GT1                 <----------DOF2      <---------ZAT18 <---------ANAC58-------       <-----------HVH21        <---------TOE1(3)     --------->ANAC58   --------->ALFIN1<---------ANAC58      <----------DOF2           <---------TOE2(3)   --------->MYB46(3)  --------->ZAT18 <------------   gtctatctctttcacctcataaatcttccaagttagggtttaactttgacctcaacaagcattgtgcgatcgagggtgctgcgtcttgtttgggtaccga  15583600                 --------->O2                 <---------ANAC46                 <---------O2                <------NtERF2               ------>NtERF2                                                   <---------AtLEC2              ----------->HVH21                                            --------------->AGL15       <----------DOF2                                                    <-----------------AGL1    <---------ANAC46                                                      ----------------->AGL1    <---------ANAC58                                                  <---------ANAC58           <---    <---------ANAC58     <<<<<<<<<MYB98       ----------->GT1         <---------ANAC58           ==== ---AtSPL8    <---------DEAR3(1)        <------ZmHOX2a(1)           <---------MYB46(3)           ==== ---->GT1     --------->DEAR3(1)       ----------->GT1              --------->MYB52(2)     --------->MYB52(1) ---AtSPL3   --------->ATERF1(1)   --------->ALFIN1               <---------MYB52(1)   --------->At4g35610   aaaactgcgttttgaggcgacgtttgggttagggaatgtggaggaaaattgttatatgccaaaacagcgtttgtttgccttgaatggccagcccaacgag  15583700                     --------->LBD16                 <---------ARR14(2)             <---------HSFB2a(2)             --------->HSFB2a(2)            <---------LBD16           ------>ZmHOX2a(1)         ------>ZmHOX2a(2)        <------ZmHOX2a(2)       --------->ARR11(3)       <---------GLK1(2)       --------->ARR14(2)       <---------ARR14(2)       <---------ARR11(3)       <---------ARR14(3)       --------->ARR14(3)                                                               ----------->GT1      --------->GLK1(1)                                                             <---------TOE2(3)      --------->HSFB2a(1)                                                          ---------->DOF2     ----------->ARR10                                                         <------MYB83 <-------TEIL ---ZmHOX2a(1)   --------->ARR14(2)                                            <------MYB46(1) ==============HOX2a_HOX2a                          <---------WRKY18(1)       --------->MYB59-------- ===============HOX2a_HOX2a                <---------------AtSPL8             <---------TOE2(3)     <   gaagacgaagatcctctggaatccgagtcttcaatagtttacgagtgagtaccttgactattttagtatttgacaacaattaggttaaagtagttacatc  15583800              --------->AHL20(2)             <---------YAB1           --------->YAB1         --------->AHL20(2)       <---------AHL20(2)      --------->AHL20(2)     <---------YAB1   --------->YAB1   <--------HAHB4        <---------MYB52(1)  <---------YAB1        --------->LBD16          <---------REM1(1)                          <-------- ->REM1(1)<---------AHL20(2)                --------->YAB1                        --------->ATHB51 ---------ZAT6<---------AHL20(2)           <---------YAB1                        --------->ICU4------   tagtattattatataataaatgactccgtagttttcaaaaatgttatgatgttgtagacttgtagttaactcaatggagaggcataatttgtattttttt  15583900  Previous    Next  AGI:  At4g32280.1    Description:  IAA29 (indoleacetic acid-induced protein 29); transcription factor. Identical to Auxin-responsive protein IAA29 (IAA29) [Arabidopsis Thaliana] (GB:Q93WC4;GB:O49363); similar to IAA31 (indoleacetic acid-induced protein 31), transcription factor [Arabidopsis thaliana] (TAIR:AT3G17600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44246.1); contains InterPro domain AUX/IAA protein; (InterPro:IPR003311); contains InterPro domain Aux/IAA-ARF-dimerisation; (InterPro:IPR011525) Range:  from: 15583393    to: 15584775    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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