Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    -                                                                                                    <                                                  --------->LBD16                                   -                                              --------->ARR14(2)                                   --                  --------->LBD16             <---------ARR14(2)                                   --                 <---------ANAC55(2)      --------->ANAC58                                         --                 --------->ANAC46         --------->ANAC58                                         <-                 --------->ANAC55(2)      <---------ANAC55(2)   <---------HSFB2a(2)                --                <---------LBD16           --------->ANAC55(2)   --------->LBD16                    --              <---------ARR14(2)          --------->ANAC46      --------->HSFB2a(2)                --              --------->ARR14(2)   --------->ANAC58         --------->GLK1(2)<---------ARR14(2)    <-              --------->GLK1(2)    --------->ANAC58         --------->ARR14(2)           --------->ANAC46        --------->At4g35610        --------->ANAC46    --------->GLK1(2)     --------->ARR14(2)    --    <---------ARR11(3)    ------->TEIL   <---------LBD16    <---------ARR14(2)   --------->ZAT14   <-   catcaatatcagccaaaatccggaattgaatctaaacacgaactacggaatccagagaatcgaatccgagaaaacaccagaactggactctactccaaaa  15579500                                                                                                 ----          <---------ATHB12                                                                     <----- -------MYC2                                                                                   ------ ------>MYC3                                                                                   <----- -------MYC3                                                                                   <----- ------>MYC2                                                                        <------MYB83<---- ------->ANAC55(2)                                                                  <------MYB46(1) ------->ANAC58                                                                    <---------MYB46(3) ------->O2                                                                      <---------MYB52(1)== --------ANAC55(2)                                                              ------->MYC3   ------ ------->ANAC55(1)                              --------->ANAC58                <-------MYC3   ------ ------->ANAC46                                 --------->ANAC58   --------->At4g35610--------->WRKY18(1) ------->ANAC58            <<<<<<<<<<GATA-1     --------->ANAC46  ----------->RAV1(1)<-----------HVH21 --------O2      --------->CCA1(2)         --------->At4g35610  --------->At4g35610--------->MYB59 -- ------->TGA1a --------->YAB1         <-----------GT1      ---------->DOF2   <---------ALFIN1 ------- --------TGA1a<---------ATHB12   <------ZmHOX2a(1)   --------->AtLEC2    --------->At4g35610  <------   cacgtgattcgaatcaatgatacaagtgaaatcgaggaaattaccagcacaagccatgtaagaaagagcagcataagctccacgtttggtcatggcagat  15579600    ---------->DOF2 -->ZmHOX2a(2) ----ARR14(2)                                                                      --------->KAN4(2) --->ARR14(2)                                                ==================================HOX2a_HOX2a ----GLK1(2)                                                 ------>ZmHOX2a(2)    <---------KAN4(1) ----ARR11(3)                                                ====================HOX2a_HOX2a --ZmHOX2a(2)                                                =========================HOX2a_HOX2a ==================HOX2a_HOX2a                             --------->ARR14(2)    <---------KAN4(2) --->ARR11(3)          <----------DOF2        --------->DEAR3(1)          <------ZmHOX2a(1) --->AGP1   <------ZmHOX2a(2)                --------->DEAR3(2)      --------->LBD16    ------>ZmHOX2a(1) ---->ZmHOX2a(1)    ------>NtERF2    --------->YAB1        <---------ARR14(2)    <---------YAB1------ -->GLK1(1) <---------ATHB12        <---------YAB1 --------->ALFIN1<---------LBD16--------->KAN4(1) ---At4g35610      <---------ALFIN1 <---------ATHB12      <------ZmHOX2a(1)    <------ZmHOX2a(1)   cctttgaaaagccgatcatcgacacctttaccatcgctatcattctcaccggcgaggggaggatcggaaaccggaaggacaggattattcctcatcgtcg  15579700                       ------>ZmHOX2a(1)                  --------->ANAC46                <----------DOF2                      <---------ALFIN1      ------>NtERF2 --------->ANAC58            <---------CCA1(2)                 --------->ANAC58          --------->DEAR3(1)   ------>ZmHOX2a(1)    ------>NtERF2                 --------->ANAC58      --------->SPL7     --------->ANAC58          --------->DEAR3(1)                 --------->ANAC46     <---------MYB52(1)<---------ALFIN1        --------->SPL7               <---------ALFIN1      <---------SPL7    <---------REM1(2)      <---------SPL7 --->ETT(2)   <---------REM1(2)  <XXXXXXXXXXXXXXXXXXXXMIR851-3P<---------ALFIN1<---------MYB52(1)   agagaggtagactctctccacgctcctcgtcttcgtcttcgttcgccgtctactctctccacgctcctcgtcttcgtcttcgttcgccgtctctttgaga  15579800                  --------->LBD16                <---------LBD16               --------->MYB52(1)              ------->GAMYB              --------->AtMYB61              <---------ALFIN1             --------->MYB46(3)                                         ----------------------->TaNAC69(2)             <---------MYB52(2)                                  --------->LBD16             <---------MYB55(2)                                 --------->ANAC58             <---------MYB111(2)            --------->YAB1      <---------ANAC55(2)            ------>MYB46(1)          ---------->DOF2            --------->ANAC58            -------->P        <-----------TGA1                 <---------LBD16                      -            ------>MYB83      <-----------HVH21              --------->ARR14(2)       *TSS   <-------          <---------MYB111(2)<---------ANAC58                <---------ARR14(2)      <---------ALFIN1        ------>ZmHOX2a(1)    <---------ANAC58               <------ZmHOX2a(1)        --------->ANAC46   ctttgttctcctccaaccaccggagaaattagcgtcaccgaaagaatgatactgaccgtagaggacacgggaaacgtttgagtaaacacacctctgtttt  15579900                                     --------------->AGL15                                     <---------------AGL15                                    <-----------------AGL2                                    <-----------------AGL3                                    ====================================================MADS_MADS                                  <-----------GT1                            ------->MYC2                            <-------MYC2                            ------->MYC3                            <-------MYC3            =========================bZIP_DOF          <---------YAB1   <---------bZIP60(2)       <---------YAB1      --------->O2       --------->ICU4      <---------ANAC58            ----------->RAV1(1)     --------->YAB1        <---------TGA1a             <---------ALFIN1     <---------ICU4        --------->TGA1a          --------->PCF2     <--------HAHB4        <---------O2            <-----------TCP11(1)     -------->ATHB1        <---------ANAC55(1)  <---------WRKY38(1)          <---------TOE1(3)    --------->ICU4         <---------ANAC55(2)  <---------WRKY12             <---------TOE2(3)    <---------ATHB12       <---------ANAC46    --------->WRKY18(1)         <---------AHL20(2)    <---  --------->WOX13(1)       <---------ANAC58   <-----------HVH21       ----------------->AGL3    <---- ----------->CBF       <-----------HVH21 <-----------RAV1(1)    <---------AHL20(2)           <------- --MYB52(1) ---------->DOF2--------->ANAC55(2)<---------PCF2  <---------YAB1---------->DOF2--------->ANAC55(2)   tttgcaatcattatcaaagagggaatgtcacgtgtttttctatttgtgggtcaaggcccacattattttaagcccatttaaagtttgggctaaacgtgat  15580000                                                                --------->ANAC58                                                           <---------------AtSPL3                                 <---------DAG2         <---------ANAC58                                 <----------DOF2        <---------ANAC58    --------->DAG2         <-                           <---------REM1(1)<---------ANAC46    --------->ANAC46                <----                         <------MYB83       ----------->RAV1(2) --------->ANAC58               ------ ------MYB46(3)          <------MYB46(1)    <---------ANAC58   ------->TEIL---------->DOF2     <----- -----WOX13(1)         <---------WOX13(1)   <---------ANAC58   --------->SPL7 --------->ZAT2  ------- --YAB1              --------->ATHB12  --------->MYB52(2) <------------------SPL14 <-----------HVH21   tgttcgattatgaactaaggccttgattggtgtagcttttttagttgcctgtccccatgcttatgtacggcattggaaaaagctgggtcatgacaaaaat  15580100                                            ------->MYC3                                            <-------MYC2                                            ------->MYC2                                            <-------MYC3                                           --------->TGA1a                                <---------HSFC1(1)                                <---------HSFB2a(2)                                               ---                                --------->HSFB2a(2)                                               <--                                --------->HSFC1(1)                                               ----                               <---------LBD16                                                   ----                            <---------GLK1(1)                                                    <---                            --------->GLK1(1)         --------->ICU4                          -------                       <---------LBD16     <---------ANAC55(1)                              <--------      <---------ANAC46<-------TEIL         <---------ANAC58                                 ---------  <----------DOF2    --------->ARR14(1)    <---------ANAC55(2)               --------->ATHB12<-------  <---------DAG2     --------->GLK1(2)     <---------TGA1a                  <---------YAB1  <-------- ----------GT1       --------->CCA1(2)     <---------O2                     --------->ICU4 --------->YAB1 -----ICU4          --------->ARR14(2)     --------->ANAC55(2)         --------->YAB1     <---------YAB1 --->AHL20(1)       <---------ARR14(2)     --------->O2               <---------YAB1--------->ZAT18 ----AHL20(1)       --------->ARR11(1)     <---------ANAC46     <---------TOE2(3)   <---------ZAT18 -->YAB1            <---------GLK1(2)      <---------ANAC58 <---------At4g35610<---------YAB1--------   attactttttgtgtaactgagagattcgggatttctggaagaatcacgtgttagtaattttcatctaatgttttcatagtgattagtgaaccattataat  15580200                                                                                     <---------HSFB2a(2) ------>AHL20(2)                                                                     <---------HSFC1(1) -------AHL20(2)                                            ----------->GT1          --------->HSFB2a(2) ----->AHL20(2)                                             <---------ANAC46         --------->HSFC1(1) ----->YAB1                                                <---------AtMYB61   <-----------GT1 ------AHL20(2)                                            --------->ALFIN1   --------->AHL20(2) -->YAB1                                                 <---------ANAC58 <---------AHL20(2)      --- -AHL20(2)                                               <---------ANAC46 --------->AHL20(2)     <--- >AHL20(2)                                               <---------ANAC58 --------->AHL20(1)     ---- --YAB1                --------->YAB1                ------->MYC3         <---------AHL20(1)   <----- -AHL20(1)---------->DOF2              ------->TEIL  <-------MYC3        --------->AHL20(2)    <----- ->ICU4--------->At5g28300   --------->YAB1      <-------TEIL            <---------ATHB12      <-----   taaaatcgcagtgaaagttttagaattagaacaataacatgaatcacatggtgcatatggtgtggtagaaccccaataaattaacttctagaatatggtg  15580300                                                     <---------ICU4                                                    --------->ICU4                                                    <---------YAB1                                                  --------->YAB1                                                  -------->HAHB4                                                  <---------ICU4          <---------ALFIN1                        --------->ATHB12         ------>MYB46(1)                         --------->ICU4         ------>MYB83                            <---------YAB1         -------->P                            --------->YAB1        ----------->RAV1(1)                    <---------ICU4       --------->AtMYB61                      <---------YAB1      --------->MYB46(3)                      --------->ICU4 -------->GT1                               <---------ICU4                  <----------DOF2 ------AtMYB61                      --------->AHL20(2)           <XXXXXXXXXXXXXXXXXXXXXMIR855 ----->ALFIN1         <---------ARR14(2)   <---------YAB1        <----------DOF2         <-------TEIL ----ANAC58           --------->GLK1(2)  --------->YAB1          <---------DAG2      <-------TEIL ----ANAC58   <-----------HVH21     <---------AHL20(2)          <---------DAG2    <---------At4g35610 ----ANAC46  <----------DOF2<---------ANAC46--------->YAB1  --------->ATERF1(1)   --------->At4g35610   tggtaaaaaccaacactttcagagaaactggggtttattttattcatcataatgattatggcgctacctttttcttagcttttgagctacgttcatgtac  15580400  Previous    Next  AGI:  At4g32272.1    Description:  similar to UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter-related [Arabidopsis thaliana] (TAIR:AT4G31600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44247.1); contains InterPro domain Protein of unknown function DUF250 (InterPro:IPR004853) Range:  from: 15576853    to: 15579886    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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