Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                               --------                                              <---------ARR14(2)                           <---------ANAC46                                             <-------GAMYB                          <---------ANAC58                                            <---------DEAR3(2)                      <---------ANAC46-                                            <---------MYB46(3)                      <---------ANAC58-                                           <---------DEAR3(1)                      <-------TEIL     -                                          <---------MYB52(1)                    <---------DEAR3(2)  <                                         --------->LBD16                       <---------DEAR3(1)   -                                         ------>NtERF2                        <---------------------WRI1                               <---------------AtSPL3                 --------->ALFIN1     <---------ANAC58                              <------ZmHOX2a(1)                  --------->MYB52(1)--------->ABI4(2)- ->ZmHOX2a(1)        ---------->DOF2   <---------LBD16    --------->AtLEC2------>NtERF2    <---------ANAC58 --->TOE2(3)     ---------->DOF2   ------->TEIL       ------>NtERF2  <-----------HVH21    <---------TOE2(3)   caaaattagccatagaagtaaaagaaaggggaggacgtacttccggcggtttcttcggccatacagagaacggtgaggccatcggtgcgtttaacgtgga  15527500                                                                <---------MYB52(1)                                                             ------>ZmHOX2a(2)                      <           ------>ZmHOX2a(1)                                <------ZmHOX2a(2)                       -        ===================HOX2a_HOX2a                     --------->GLK1(2)                        <        <------ZmHOX2a(2)                                  --------->ARR11(3)                     ---       --------->ARR14(2)                                  <-----------ARR10                      <--       --------->ARR11(3)                                  --------->ARR14(2)                    <---       <---------ARR14(2)                                  <---------ARR11(3)                   <----      ------->GAMYB                             --------->HSFB2a(1)                             <----   --------->MYB52(1)                           <---------HSFB2a(1)                             <---- ->ALFIN1 --------->TOE1(2)        <---------MYB52(1)      <---------AGP1                      ------ -------->ANAC55(1)               <-------GAMYB <---------HSFC1(2)                           <------- -------->ANAC58                 <---------MYB46(3)  <---------HSFB2a(2)<---------DEAR3(1)   -------- -------->ANAC46              <-----------RAV1(1)    --------->HSFB2a(2)<---------AtMYB61    -------- ---------ANAC55(2)     <---------O2            --------->HSFC1(2)      --------->ALFIN1  <---------AtMYB61 -------->ANAC58        --------->O2       --------->LBD16 <---------ARR14(2)  --------->ANAC58<----- -------->ANAC55(2) <------ZmHOX2a(1)     <---------LBD16 <------ZmHOX2a(1)    --------->ANAC58<-----   agacgtaacgatcctgagagtaggagacgttgctgtcgttgtctccagggaccttctcgaggatctgtttggcgatggtgctcgcattcgtagaggtggc  15527600                                       <---------SPL7        ==================================bZIP_DOF        ===========================bZIP_DOF ---------ZAT14                       <---------ANAC46 -------->ZAT14                      <---------------AtSPL3 ---------ZAT18                      <---------------AtSPL8 ------>At5g28300          --------->ANAC46 ----NtERF2                --------->ANAC58 ------MYB46(3)            --------->ANAC58  --------->ARR14(2) -----DEAR3(1)            <-------PIF5<---------ANAC58 -----DREB2C(2)           ------->PIF5<---------ANAC58                   ------>NtERF2 -----ANAC46         --------->SPL7<---------DEAR3(1)                 ----------->RAV1(2) --->ATERF1(1)    --------->DEAR3(1) --------------->AtSPL3       <------ZmHOX2a(2) --DEAR3(1)    <---------ALFIN1 --------->O2 <---------ARR14(2)  --------->ARR14(2)                 < --->HVH21    <---------ABI4(2) <---------TGA1a                  <---------ARR14(2)                 < ->ALFIN1     <---------MYB55(2)<---------O2 <---------GLK1(2)<------NtERF2                         < -NtERF2---------->DOF2  --------->TGA1a --------->SPL7     <---------DEAR3(1)                     -- ----ABI4(1)  --------->MYB46(3)--------->TGA1a           <-----------HVH21                     -----   ggtgaactcagaaagaaccaccgtgccacgagccacgagggcgtacagaatcgccatctccgtcgtcgatccccctgccgaatcaacaaaactcgtgtaa  15527700                          --------->ARR14(2)                          <---------ARR14(2)                        --------->LBD16                      <---------LBD16                      --------->LBD16                    <---------LBD16                   >>>>>>>>>>E2Fa                               --------->YAB1        >>>>>>>>>TBF1--------->LBD16                           <---------ATHB12 ---------WRKY12   >>>>>>>>>>E2Fb                            --------->WOX13(1) ---------WRKY38(1)>>>>>>>>>>E2Fc                  <---------TOE1(2) ---------WRKY45   >>>>>>>>>>E2Fe             ------->TEIL <---------ATHB12 ------->WRKY18(1) >>>>>>>>>>E2Ff   --------->ANAC58     --------->WOX13(1)                        <- ---->MYB59        >>>>>>>>>>E2Fd   --------->ANAC58   <------ZmHOX2a(2)                           <-   ggtcaacgaagaagaaggttttcccgcggaaaccgagccagccagacgaatcgctggatcaatcaatcagagagagagagagagagagagagaaccaatt  15527800                                                                          <----------DOF2                                                                         <---------DAG2                                                                       <---------ARR11(3)                               <----------DOF2                         --------->ARR11(3)                              <------------------------ANAC81   --------->At4g35610  *TSS                          ------->TEIL                          <---------At4g35610  --------->At4g35610                         <---------GLK1(2)                      <---------ZAT2       --------->LBD16   <----------DOF2 <---------AHL20(2)                     <---------At4g35610        <---------At4g35610 --------ANAC58    <---------YAB1                         --------->At4g35610     ------>NtERF2  ---- --------ANAC58    --------->AHL20(2)         ------>ZmHOX2a(1) --------->ZAT2   --------->DEAR3(1) -   ggcttctttttctctctgcatataattgaatctctttctctctctctcctcttggagtttagctggagctggagaccttttcgcctccgctgattacaaa  15527900                                                       <------ZmHOX2a(2)                 <---------ANAC46                    <------ZmHOX2a(1)           --------->GLK1(1)                    <---------AHL20(2)       <---------ANAC46    <---------YAB1      --------->YAB1      <---------LBD16    <---------AHL20(2)   <---------YAB1 <---------AHL20(2)     <---------AHL20(2)  --------->YAB1 --------->AHL20(2)     --------->AHL20(2)  <--------HAHB4                       <---------LBD16 ----->AHL20(2) <-------TEIL    --------->AHL20(2) <---------TOE2(3)          --------->ARR11(3)  --- -------->AHL20(2)     <---------WOX13(1)  <---------YAB1                    --------->RVE1(1)  <----   tatttaatttcggatagctacgttgatttatttttaaaatactgtattattataaggatcaaaatgaaattttgtcaaaatatcacgggcaaaactaagt  15528000                                                                                                 <---                                                                                                -----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                <---------AHL20(2)                             ------                                            --------->AHL20(2)                        <---------AHL20(1)                                     <---------ANAC55(2)                              --------->ARR11(3)                                     ----------->GT1     ---------->DOF2              --------->AHL20(1)   <----------DOF2                  <---------ICU4    <---------YAB1             ----------->GT1----- ------>MYB52(2)                   --------->ICU4  --------->ICU4       <---------ANAC58     <------- -----MYB52(1) --------->ETT(1) <---------YAB1  --------->AHL20(2)      <---------ANAC58 <-----------   tagttctttttgttttgtcggaactaatttagttctaataagtaaaaaatataaatatgaaaagaaaacaatttgcttcagtttcgaaaatattgtaccg  15528100 ------MYB52(1)             <---------TOE1(3) ---->At5g28300            <---------DOF5.7(2) ----ANAC46              --------->DOF5.7(2) ----ANAC58        <---------AHL20(2) ----ANAC58       <---------YAB1 ----->GT1     <---------YAB1--------->ZAT6 ---->LBD16  <------ZmHOX2a(1) --At5g28300--------->ICU4<---------WRKY38(1) ----AtSPL8<---------TOE2(3)<---------TOE2(3)                     ---------->DOF2 --------->GLK1(2)   tgaattgttttataaggattattaatggttaacgctaaattagtttgatatcaaacttataagaaatacaaagaaaacaaacaaattctatcagtttcaa  15528200                                 ----------->GT1                                 --------->YAB1                              --------->YAB1                              --------->ATHB51                              <---------ICU4                                                       <-                              <--------ATHB1                                                ---------                        <------ZmHOX2a(2)    --------->LBD16                                <------ZmHOX2a(1)                       --------->ARR11(3)   <---------ANAC58                               ----------                       <---------ARR11(3)   <---------ANAC46                   <-----------GT1 ------        <---------GLK1(1)    <---------ATHB51<---------LBD16                <---------ICU4<---------TOE2(3)        --------->GLK1(1)    --------->ICU4 <---------ANAC58         ----------->GT1<---------ARR14(2)   ----------->GT1 ---------->DOF2     <---------AHL20(2)        ---------->DOF2    --------->ARR14(2)   acaaatagagaaatctgagcaaaaagatcgaataattgtaatttatccgtggaagaagatgtgattttaaagtgtaaatttttacgaatatgaaggataa  15528300                                                                 ------>MYB83                                                               --------->MYB46(3)                                                               <---------MYB59                                                               <---------MYB46(2)                                                               <---------MYB111(1)                                                             ------->TEIL                                                           <---------SPL7                                                          <---------bZIP60(1)                                                          --------->bZIP60(1)                                                          <---------ANAC46                                                          <---------ANAC55(2)                         ---------->DOF2                  <---------bZIP60(2)                         <---------AHL20(2)               --------->ANAC55(2)                        --------->AHL20(2)                <---------ANAC58                      --------->TOE2(3)                   <---------ANAC58                     <--------HAHB4                      --------------->AtSPL8                     <---------ICU4                      <-----------------------TaNAC69(2)                     --------->ATHB12                    <---------------AtSPL8                    <---------YAB1                       --------------->AtSPL3 --------REM1(1)    --------->ICU4                     ----------->HVH21 -->GT1           <---------ICU4                 <---------AtMYB61           --------->DAG2 ->GT1            --------->YAB1                 --------->ALFIN1------>MYB46(1) --->AHL20(2)    <---------ATHB12              <-----------RAV1(1)          ---------->DOF2   aatgtagggatgtgttcaaatcatcattaaatcagtttttttttttttagtgtggtagtgacgtaccaaacaaaaccaaaaagcggtctatttccttctg  15528400  Previous    Next  AGI:  At4g32150.1    Description:  VAMP7C (VESICLE-ASSOCIATED MEMBRANE PROTEIN 7C). Identical to Vesicle-associated membrane protein 711 (VAMP711) [Arabidopsis Thaliana] (GB:O49377); similar to ATVAMP712 (Arabidopsis thaliana vesicle-associated membrane protein 712) [Arabidopsis thaliana] (TAIR:AT2G25340.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44255.1); contains InterPro domain Longin-like; (InterPro:IPR011012); contains InterPro domain Synaptobrevin; (InterPro:IPR001388); contains InterPro domain Longin; (InterPro:IPR010908) Range:  from: 15526119    to: 15527885    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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