Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               --------->YAB1                                              --------->CCA1(2)                                              <------ZmHOX2a(2)        ---------->DOF2                             --------->ANAC58--------->ARR11(3)    --------->TOE1(3)                             --------->ANAC58--------->ARR14(2)    --------->TOE2(3)                    <---------WOX13(1)       <---------ARR11(3) <---------ARR14(2)  ---------->DOF2 --------->ATHB12           <---------ARR14(2) --------->ARR14(2) ----MYB52(1)    --------->ICU4              --------->AGP1  --------->TOE2(3)     <----------DOF2 >MYB46(3)       <---------YAB1   --------->MYB52(1)        <-------TEIL      ---------->DOF2   aattcaaagctcgaagaacatgattgaaaacaagcctaatggaataagatccaaatgaaacatccataacctcaaaagatgaaagctttaaacaaaattg  15525100                                               --------->YAB1                                     ----------->HVH21                                     --------->WRKY38(1)                                   <---------At4g35610                                      ------>MYB46(1)                                  <---------AtMYB61                                         ---------                                  <---------DEAR3(1)                                        -------->P                              <---------LBD16 <---------YAB1                  --------->ZAT2------>MYB83                ----------->RAV1(2)--------->At4g35610           --------->YAB1      ------->TEIL  <-      <---------YAB1          <---------At4g35610               <---------ATHB12    <---------CCA1(2)      <---------ATHB12        --------->At4g35610             --------->WOX13(1)<----------DOF2   ---   aagagacaatgaatgaatacctgagtaacttcagcggaggtgacccatatgataacaacagtgccaatcaagaacagaccagctttgtatctccaaccca  15525200                                                       <---------ZAT14                                                       --------->ZAT18                                                       --------->ZAT14                                                    <---------ANAC58                                                    <---------ANAC58                                                  <---------YAB1                                            =========================HOX2a_HOX2a                                            <------ZmHOX2a(1)  ------>ZmHOX2a(2)                                            ==========================HOX2a_HOX2a                                          --------->LBD16     <------ZmHOX2a(2)                                         <---------HSFB2a(2)  --------->CCA1(2)                                         <-----------RAV1(2) --------->ARR11(3)                                         <---------LBD16     <---------ARR14(2)                                         --------->HSFB2a(2) --------->ARR14(2)                                       --------->CCA1(2)     --------->ARR14(3)                                       <------ZmHOX2a(2)     <---------ARR11(3)                                      --------->ARR14(2)     --------->AGP1                       <--                                      --------->ARR11(3)    <---------GLK1(1)                     === >ANAC46                              <---------ARR11(3)    --------->GLK1(1)                 <------ZmHOX2a(1) --------AHL20(2)                     <---------ARR14(2)   ----------->ARR10        <----------DOF2 ------>AHL20(2)     ---------->DOF2  --------->AGP1<---------ANAC46  ----------->GT1         =======   tttaatataaaaaaactctaaattgaagcccagaaatgaagatccaggagttttgagtgcagagatctgctcgtgtaaattgacttctttgagctaggaa  15525300                                              <---------ANAC58                                              <---------ANAC46                                            --------->ZAT14                                            <---------ZAT14                                           --------->ALFIN1                                          <------NtERF2                                          <-------GAMYB                                          --------->ATERF1(1)                                         <---------ORA47(2)                                     <---------DEAR3(1)                      <------ZmHOX2a(1)  <---------MYB46(3)                   --------->At4g35610  --------->ALFIN1                   <------NtERF2 --------->LBD16            <------ZmHOX2a(2)   <---------LBD16            =================HOX2a_HOX2a<---------DREB2C(2)           --------->ARR11(3)   <---------HSFB2a(2)          --------->DAG2                <--------- ----ZmHOX2a(1)    <---------At4g35610  <---------DEAR3(1)  ---------->DOF2        ----------->GT1 ==================HOX2a_HOX2a <---------ANAC46  <---------ZAT14----------->GT1  <---------ANAC46 ==================HOX2a_HOX2a <---------LBD16<---------ANAC58 ----------->GT1----------->HVH21   ggagattgaattagatcaggcagaggaagtgattcggggaaggcggtggagtgaagaagagaaaaagggaaaattcagagacgacgggaaaattgaccat  15525400                              ------->GAMYB                             --------->MYB46(3)       *TSS                            <---------At5g28300      <----------CDC5                           <---------ARR14(2)      --------->ANAC58             <---------ICU4                           --------->MYB52(1)   <---------ZAT18                --------->AHL20(2)                           --------->ARR14(2)   <---------SPL7                 --------->ICU4                  --------->ANAC58        --------->MYB52(1)            <-----------RAV1(2)                  --------->ANAC58     --------->ANAC58          <-----------HVH21 <-----------GT1                --------->MYB52(1)     --------->ANAC58     ---------->DOF2<------ZmHOX2a(1) -------- --GT1        ---------->DOF2<------------AtMYB77  --------->ANAC58     <---------LBD16 <----------DOF2   ctcagaaaaaaaaacataaaacggaagagtaaccgcgagggaaggaacggggcacgcagagggaaagcgttagaccaggaaatatttacacttttgtttt  15525500                                             <---------ZAT6                                           ----------->GT1                                       --------->ARR11(3)                                       <---------AHL20(1)                                       --------->AHL20(1)                                      --------->AHL20(2)                    --------->YAB1    <-----------TBP            <---------AHL20(2)                    <---------ICU4 <---------ICU4                <---------YAB1                 --------->YAB1    <---------AHL20(2)          <----------DOF2                <---------AHL20(2)--------->AHL20(2)          <-----------------AGL3            --------->AHL20(2)  --------->YAB1             <---------YAB1                        <---          ----------->GT1      <---------AHL20(2)<---------AHL20(2)                              <---        ---------->DOF2       <---------AHL20(2)<---------AHL20(2)         <---------ZAT14  <-------- -->ID1<------ZmHOX2a(1)      --------->AHL20(2)--------->AHL20(2)        ----------->GT1   <--------   tttttgtaaggaaagtaaataatcatgttttttttaataaatatatagtattaattttgttatgactttaattggactgtagaatttttagtaagcgtga  15525600                                               --------->DAG2                                           --------->TOE2(3)                                           --------->TOE1(3)                                           ----------->GT1                        <---------ATHB12       <----------DOF2                  <-----------GT1                          ------>MYB83    <---------RAP2.6(3)           <---------RVE1(1)                              ------>MYB46(1)   --------->RAP2.6(2)           --------->ARR11(3)                            <---------MYB59 ------bZIP60(2)          <---------HSFB2a(2) ---------->DOF2<---------AHL20(2)--------->AtMYB61 ------REM1(1)            --------->HSFB2a(2)<---------MYB52(1)  <---------AHL20(2) -ANAC58            <----------DOF2   <---------AHL20(2) <----------DOF2       ------->GAMYB -ANAC58    <----------DOF2      <---------ARR11(3)      <---------DAG2       --------->MYB46(3)<----   tgtagccgtcttttcttttcttctttttctgtaacgatatttaaaccgtaaagtcgacgctttttattttttttggttcaaccaaacattttagtatttt  15525700                                                                                               ------                                                                                             --------            <---------AHL20(2)                                                         --------->AHL20(2)            --------->AHL20(2)                                                         <---------AHL20(2)       ----------->GT1                                                              <---------AHL20(2)   <---------ARR14(2)   <----------DOF2                          <---------YAB1    --------->AHL20(2)   --------->ARR14(2)   ------>ZmHOX2a(1)     ----------->GT1 <---------AHL20(2)   --------->YAB1 -----YAB1--------->CCA1(2)                <---------ANAC46  --------->AHL20(2)   <---------YAB1-----   gatcatatatggatataaattccatccttttagttagtaaacatggtgttgataaaaacaaaattttatatttgaaatgctgctattatataaataaaag  15525800                                   <---------ANAC58                                   <---------ANAC58                                   <------MYB83                                   <------MYB46(1)                                  --------->MYB111(1)                   <---------AHL20(2)                   --------->AHL20(2)     ----------->HVH21                  --------->AHL20(2)    <---------ANAC58                  <---------AHL20(1)    <---------AtLEC2                  --------->AHL20(1)    <---------ANAC58                  <---------AHL20(2)   <------NtERF2                    <---------ANAC58              <---------YAB1      --------->MYB59                       <---------ANAC58          ------>MYB83            --------->MYB46(2)                    <---------ANAC46        <---------MYB111(1)   <--------HAHB4                          --------->ALFIN1        <---------MYB46(2)    --------->YAB1               <------MYB83<-------TEIL --->DAG2 ------>MYB46(1)    <---------YAB1                <------MYB46(1)----------->RAV1(2) -->DOF2<---------MYB111(2)  --------->ICU4              <--------P <---------ANAC58 ------>GT1 --------->YAB1<-----------------AGL3 <---------ARR11(3) <---------ANAC58   gttaaatccacctactataatttatttagctattattaggtggcatgacaagatgtcaagttggtgaatgaggtgcgtctggccttaactagagatgata  15525900                --------->ANAC58                <---------ETT(2)                --------->ANAC58               --------->SPL7             <---------SPL7           <---------LBD16             --------->ARR11(3)     --------->AHL20(2)                ------->TEIL        <----------DOF2           --------->YAB1     <---------AHL20(2)               <---------CCA1(2)<----------DOF2 <-----------GT1     <---------AHL20(1)--------->AHL20(2)          <---------CCA1(2)   <---------AHL20(2)  --------->MYB46(3) <---------CCA1(2)     <---------AHL20(2)          ------>ZmHOX2a(1)<---------ICU4  <---------YAB1   cccatattttattttcggacgacaatttatgacacttgttgtatcttgttctcctatctttcttttctaatatttacattcgatttatgatcaacaaatg  15526000  Previous    Next  AGI:  At4g32140.1    Description:  similar to membrane protein [Arabidopsis thaliana] (TAIR:AT3G07080.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72310.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) Range:  from: 15522890    to: 15525454    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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