Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <---------YAB1                                       <---------ARR11(3)                                       --------->ARR11(3)                                    --------->AHL20(2)                                <---------AHL20(2)                   ---------->DOF2  <---------ICU4                          <-----------HVH21                  --------->YAB1--------->AHL20(2)                 ----------->GT1                 <---------ATHB12   --------->YAB1               XXXXXXXXXXXXXXXXXXXX>MIR417               --------->WOX13(1)--------->YAB1                --------->DAG2      --------->ZAT2           --------->AHL20(2)             ---------->DOF2      --------->At4g35610      <---------AHL20(2)          --------->At4g35610      <---------At4g35610 --------->ANAC58                 <---------At4g35610    --------->MYB46(3)    --------->ANAC58             --------->ANAC46   <-------TEIL    <------ZmHOX2a(2)   aattgaacagctgaattcaatcaaagacaagaatttaataatatccttgggatgtataagcagctaaagtagtaaattcgtcaaacaagtagatcaaatt  15522200                    --------->YAB1                   <---------YAB1                 --------->YAB1                 <---------ICU4                 -------->ATHB1                          <------ZmHOX2a(2)                <---------ATHB51                        --------->ARR11(3)                --------->AHL20(2)                      <---------ARR11(3)                --------->ICU4               <---------TOE2(3)--------->ZAT14                       <                <---------AHL20(2)          --------->MYB52(1)<---------ZAT14                       -    <---------TOE2(3) <---------YAB1        <---------DOF5.7(2)  --------->TOE1(2)              -----   gaaatcaacgttgcacaaattattatcaaaccccaaaacttggagataacgatatcaagatcactaaactacgagggaagacttagagggtaatgctaaa  15522300                 --------->ANAC58                 --------->ANAC58                --------->DAG2               ---------->DOF2            --------->ANAC58        --------->At4g35610        <---------ZAT2                                                                           ----        --------->ZAT2                                                                         <-----        <---------At4g35610                                          <---------GLK1(1)  --------->ATHB12       <---------TOE1(2)                                            <---------ARR14(2) --------->ICU4 <---------GLK1(1)                                                  --------->ARR14(2)<---------WOX13(1) --------->GLK1(1)                   --------->AHL20(2)            <------ZmHOX2a(1)================= ---------ARR11(3)    --------->MYB46(3)                 <---------ARR11(3)         ================= -------->ARR11(3)  --------->MYB52(1)---------->DOF2  --------->ANAC58             <------ZmHOX2a(1) ----->DOF2 --------->ANAC58   --------->YAB1          --------->ANAC58        --------->CCA1(2) <---   aagatatcgcagctacgaaaagcaacgactgaatgaaaattaaagctctatgtcaacaagctctatagaggatttgtggagatagaggattgattaccca  15522400                                                                            <------NtERF2                                                                          --------->ANAC46                                                                         --------->RAP2.3(1)                                                                        <---------RAP2.3(1)                                                                        <---------ATERF1(1)      ----                                                                       <---------DEAR3(1)       <----                                                                     <---------ARR14(2)        <-----                                                                     --------->GLK1(2)         <-----                                                               ------>ZmHOX2a(2)               ------             --------->ALFIN1                                 <---------At4g35610          <---------ZAT2     ------>ZmHOX2a(2)                                        --------->At4g35610          <---------At4g35610    <------ZmHOX2a(2)         >>>>>>>>>TBF1                  --------->ARR14(2)            --------->At4g35610 ----->At4g35610    ---------->DOF2           <----------ID1 <---------AGP1------>NtERF2 <-----------RAV1(2) ------RAV1(2)   --------->ANAC58          --------->DAG2    <---------ARR14(2)        <-----------HVH21 ===========HOX2a_HOX2a    ------------------------>ANAC81   <---------ARR11(3)  <---------ARR11(3) ==========HOX2a_HOX2a     >>>>>>>>>TBF1  ---------->DOF2 --------->ALFIN1--------->DEAR3(1)   ------ ------At4g35610 --------->ANAC58   ----------->GT1--------->DAG2    --------->ARR14(2)<-----------TGA1   gatgagatcggaagagtggaagcaaagaagaagaagaagagagaaaaagcgataagggaagtggatctgaaaatcggcgccatggtcttcgtcagcagat  15522500          --------->SPL7    --------->ANAC58    --------->ANAC58  ---------->DOF2                      --------->LBD16 -->ZmHOX2a(2)                        <---------LBD16                                              <- --ZmHOX2a(2)                      <-----------HVH21                                               *TSS ----ARR14(2)                 <---------TOE1(2)                                                    -- ----ARR11(3)               --------->TOE1(2)   <------ZmHOX2a(1)                                  <- --->ARR14(2)      <---------AHL20(2)<---------LBD16                                         -------- --->ARR11(3)     --------->AHL20(2) <-----------RAV1(2)                         <----------DOF2   --   cgtcgaaagccagacgacgattttataaatcgttcgatttcaggggaagaggaagaaacacagacagaacaaggcgaactaaactttctggctcagaaag  15522600                            <---------YAB1                          --------->YAB1                          <---------ICU4                                                        -----            --------->MYB46(3)--------->WOX13(1)      --------->YAB1                         <-------   --------->MYB52(2)    --------->ICU4    <---------AHL20(2)        <---------YAB1        <---------  <-------TEIL  <---------ATHB12           --------->AHL20(2)        <---------TOE2(3) --------->ARR14(2) --------HSFC1(2)<---------ICU4         <----------DOF2          --------->TOE1(3)     <---------ARR14(2) ------->HSFC1(2)--------->YAB1        <---------ANAC58       ----------->RAV1(1)     <---------CCA1(2) --------HSFB2a(1)  --------->YAB1     <---------ANAC46  --------->AHL20(2)    <---------AHL20(2)   < -->DOF2    ------------>CBF------------>CBF       --------->YAB1--------->TOE2(3)<-----------GT1   - ------->HSFB2a(1)  ----------->GT1    <---------ANAC58  <---------AHL20(2)<---------GLK1(2) <-------   aaggttcgttctgaaccaataatcgtaattatcaattactggcttttaatttagaataataaaacaacattaacatagaatttttttcatatctgtcaac  15522700                                            <<<<<<<<<GATA-1                                           <-----------GT1                                         <---------AHL20(2)                                      --------->AHL20(2)                                      <---------AHL20(1)                                    <---------AHL20(1)           <---------MYB46(3)       --------->ARR11(3)          <--------P                --------->AHL20(1) ---->ANAC46                        <---------ARR11(3) --WRKY12 <---------WOX13(1)     --------->AHL20(2)                  <------MYB83 --HVH21<---------MYB46(3)  <------ZmHOX2a(2)                        <------MYB46(1) ---------TOE1(3)          <---------ARR11(3)                       --------->MYB59  --------->STY1(2) -------->DAG2             --------->ARR11(3)            ----------->GT1             <---------STY1(2) --WRKY38(1)           ---------->DOF2--------->AHL20(1)<---------TOE2(3) <---------ANAC46      -----   gtaaggttattggttgatggagttttaaagatcaaaaaaatattttatctatgccaacaaggttattagttcggtttcatgtatacgagctagttcaaac  15522800                                                                                    ------->MYC3                                                                                    ------->MYC2                                                                                    <-------MYC3                                                                                    <-------MYC2                                   ------->GAMYB                                --------->ZAT18                                  --------->MYB46(3)                            <---------ZAT18                                 <---------At4g35610                         <---------ANAC58                                 --------->At4g35610                         <---------ANAC58                         <----------DOF2                                ---------->DOF2 ------->TEIL           <---------ICU4   --------->MYB46(3)      <----------DOF2<-------TEIL--------- ---->YAB1    <----------DOF2   ----------->RAV1(1)          <----------DOF2 <---------ANAC46   atgaatttgattttttctttcactcatctttgctcaacagacaacaactctctctggtttgcactttctttttccaaagacgtgcacatgggaatcaaaa  15522900                                                                               --------->HSFC1(1)                                                                          <---------HSFC1(2)                                                                          --------->HSFC1(2)                                                                          --------->HSFB2a(1)                                                                          <---------HSFB2a(1)                                                                         <---------ARR14(2)                                                                         --------->GLK1(2)                                                                         --------->ARR14(2)                                                                         --------->ARR11(3)                                          --------->KAN4(2)              <---------ARR11(3)                                         <---------HSFC1(2)         ------->GAMYB                                         <---------HSFB2a(1)       --------->MYB46(3)                                         --------->HSFC1(2)        <---------ATHB12  <-------TEIL        --------->YAB1                   --------->HSFB2a(1)      ------>MYB46(1) <------ZmHOX2a(1)  <------MYB46(1)                    ----------->GT1              ------>MYB83 --------->HSFB2a(2)  <------MYB83  <---------CCA1(2)   ----------->GT1    <----------DOF2  <---------GLK1(2) >YAB1  <-----------GT1       --------->AHL20(2)<----------DOF2   -------->P   <---------HSFB2a(2)---   acgttggtaatcacattcttatctttcatccattaaacagggaaaattcccttttagctttcaattccaaccaagaatcttctaggatacattttctacc  15523000                                                                                                   <-                                                                                              <------                 ------->GAMYB                                    <---------ARR14(2)     <---------ARR14(2)                --------->MYB46(3)                                --------->ARR14(2)  <---------YAB1               --------->ANAC58                                  <---------GLK1(1)    --------->ANAC55(2)               --------->ANAC58                           --------->HSFB2a(2)         <---------ANAC55(2)        --------->ANAC46                               <----------DOF2 <---------MYB52(1)------->TEIL     <----------ID1     ---------->DOF2           <---------HSFC1(2)   --------->ARR14(2)--------->ARR14(2) ------>LBD16--------->MYB46(3)--------->YAB1     --------->HSFC1(2)   <---------ARR14(2)--------->GLK1(2)   cagaaataccacaaaacaaccaaaaaaaaagaatcatatgtgctacaatccaagcttctttgagaacaaatccgatatgttagctattacgaatccagca  15523100  Previous    Next  AGI:  At4g32130.1    Description:  carbohydrate binding. Identical to UPF0480 protein At4g32130 precursor [Arabidopsis Thaliana] (GB:Q8VY97;GB:O49379); similar to carbohydrate binding [Arabidopsis thaliana] (TAIR:AT2G25310.1); similar to unknown [Populus trichocarpa] (GB:ABK93042.1); contains InterPro domain Carbohydrate-binding-like fold; (InterPro:IPR013784) Range:  from: 15520037    to: 15522599    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g32140.1    Description:  similar to membrane protein [Arabidopsis thaliana] (TAIR:AT3G07080.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72310.1); contains InterPro domain Protein of unknown function DUF6, transmembrane; (InterPro:IPR000620) Range:  from: 15522890    to: 15525454    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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