Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           ------>MYB83                                                                                         ------>MYB46(1)                                         <---------HSFC1(2)                            <---------MYB59                                         --------->HSFC1(2)                            <---------MYB111(1)                                    <------ZmHOX2a(1)                                  <---------MYB46(2)   --------->HSFB2a(2)          --------->TOE2(2)                                     --------->ANAC55(2) -->bZIP60(2)                 ------->TEIL                                     <---------ARR14(2) -->ANAC58       ---------->DOF2--------->TOE1(2)                              <---------GLK1(2) -->ANAC58       <xxxxxxxxxxxxxxxxsmallRNA(i)            <-----------GT1       --------->ARR14(2)   aacaccgagaacgtctgactaaagccttactgtacctaggagaagcttcaagagccaaattacattcgctaatcgcattcggatactcacctaatcccat  15506800                                      --------->REM1(1)                                     <-------TEIL            --------->ARR11(3)                                  --------->At4g35610        <---------ARR11(3)                                 --------->ANAC58  <----------DOF2                                <--                                 --------->ANAC58 ------>ZmHOX2a(2)                           -------                               --------->CCA1(2) <---------YAB1 <----------DOF2               <------            --------->ANAC58 --------->YAB1     <---------ARR11(3)                           <-------            --------->ANAC58<---------TOE2(3)   --------->ARR11(3)      <----------DOF2      ------->TEIL   ttgcatataacaagaagccatactcgttctaagataagctacatcgatatgatctttgggcaagagcttcaaggctttgtcgaaactcaacatcgcacct  15506900            --------->HSFC1(1)            <---------HSFC1(1)                                         <---------ARR14(2)            --------->HSFB2a(2)                                        <---------ARR11(3)            <---------HSFB2a(2)                                        <-----------ARR10         <---------ARR14(2)                                            --------->ARR14(2)         --------->GLK1(2)                                             --------->ARR11(3)         --------->ARR14(2)                                            <---------ARR11(1)       <----------DOF2                                                <---------CCA1(2)      <---------ANAC58                                         --------->GLK1(2)      <---------ANAC46                                         --------->ARR11(3)      <---------ANAC58                          --------->ZAT18<---------ARR11(3)     <------NtERF2                              <---------ZAT14--------->ARR14(2) -------ANAC46                                  --------->ZAT14<---------ARR14(2) -->HSFB2a(1)                           --------->At4g35610    <-----------ARR10 ---HSFB2a(1)            <-----------GT1<---------At4g35610--------->YAB1    <-----------HVH21 --TOE1(2) <---------LBD16         <----------DOF2   <---------At4g35610     --------->TOE2(3)   tcgtggtcgcgtttctggaacaacttgttaccttcttctttgagctcaagtgctctgctaatgaaaatctccatatcttcgtcaaataccctcgaagtag  15507000                                            <---------LBD16                                           --------->ABI4(1)                                          --------->ATERF1(2)                                          --------->RAP2.3(2)                                          <---------DEAR3(1)                                          --------->DEAR3(1)                                          <---------ATERF1(2)                                          --------->RAP2.3(3)                                          --------->RRTF1(2)                                          --------->RRTF1(3)                                         --------->ATERF1(1)                                         --------->ERF1                                         --------->RRTF1(1)                                         --------->ORA47(2)                                         --------->RAP2.3(1)                                         --------->DEAR4(2)                                         --------->RAP2.6(1)                                         <------NtERF2                                        <---------DREB2C(1)                                        --------->ABI4(1)                                        <---------At4g35610                                        --------->At4g35610                                        ------>NtERF2                                        <---------ATERF1(1)                                        <---------DEAR4(2)                                        <---------RAP2.3(1)                                       --------->RRTF1(2)                                       --------->RRTF1(3)                                       --------->DEAR3(1)                                       --------->RAP2.3(3)                                       <---------ATERF1(2)                                       --------->ATERF1(2)                                       --------->RAP2.6(2)                                       --------->RAP2.3(2)                                       <---------DEAR3(1)                                       --------->ANAC46                                       <---------ALFIN1                                      --------->ERF1                                      --------->DEAR4(2)                                      --------->RAP2.6(1)                                      --------->RAP2.3(1)                                      <------NtERF2                                      --------->ATERF1(1)                                      --------->RRTF1(1)                                     <---------At4g35610                                     --------->At4g35610                                     <---------RAP2.3(1)                                     <---------DREB2C(1)                                     <---------ATERF1(1)                                     --------->ABI4(1)                                     ------>NtERF2                                     <---------DEAR4(2)                                    --------->RRTF1(2)                                    --------->RAP2.3(3)                                    --------->RAP2.6(2)                                    --------->RAP2.3(2)                                    --------->RRTF1(3)                                    --------->ATERF1(2)                                    <---------ALFIN1                                    <---------ATERF1(2)                                    <---------DEAR3(1)                                    --------->ANAC46                                    --------->DEAR3(1)                                   --------->ERF1                                   --------->DEAR4(2)                                   --------->RAP2.6(1)                                   --------->RRTF1(1)                                   --------->ATERF1(1)                                   --------->RAP2.3(1)                                  <---------RAP2.3(1)                                  <---------DEAR4(2)                                  ------>NtERF2                                  <---------DREB2C(1)                                  <---------ATERF1(1)                                  --------->At4g35610                                  <---------At4g35610                                  --------->ABI4(1)                                 --------->RRTF1(2)                                 --------->RAP2.6(2)                                 --------->RAP2.3(3)                                 --------->ATERF1(2)                                 --------->RAP2.3(2)                                 --------->ANAC46                                 <---------ALFIN1                                 <---------ATERF1(2)                                 --------->RRTF1(3)                                 <---------DEAR3(1)                                --------->ORA47(2)                                --------->ERF1                                --------->RAP2.3(1)                                --------->DEAR4(2)                                --------->ATERF1(1)                                --------->RAP2.6(1)                                --------->RRTF1(1)                               <---------ATERF1(1)                               ------>NtERF2<------NtERF2                               --------->ABI4(1)                              --------->DREB2C(2)               <---------ARR14(2)                              ------->GAMYB<---------ATERF1(1)  --------->ARR14(2)                              --------->DEAR3(1)  --------->HSFC1(2)                              --------->AtMYB61   --------->HSFB2a(1)                              <---------ALFIN1    <---------HSFC1(2)  --------->ARR14(2)                              --------->ANAC46--------->LBD16 <---------ATERF1(1)                             --------->MYB46(3)   <---------HSFB2a(1) <---------ARR14(2)                             --------->DEAR3(2)  --------->ANAC58   --------->LBD16              ----                            <---------ATERF1(1)<------NtERF2 <---------ANAC58                    <---                           --------->AtMYB61--------->ATERF1(1)<------NtERF2                    -----                           <---------ALFIN1------>NtERF2     <---------ANAC58               <--------                          --------->MYB46(3)--------->RAP2.3(1)--------->ATERF1(1)          <--------                         ------>NtERF2--------->ORA47(2)     <---------ANAC46 <<<<<<<<<TBF1<---------ANAC58                   <---------ANAC58<------NtERF2 --------->ANAC58 <---------LBD16     <-------GAMYB                   <---------ANAC58--------->ORA47(2)       ---------->ID1<-----------GT1  <---------ANAC58     <--------P ----------->HVH21--------->DEAR3(1)    <----------DOF2<---------GLK1(2)<---------MYB52(1)   aacgatggtaagttttccctgacttgcctccaccgccgccgccgccgccggaagcatcttttggcgtctccggatttttcttcttcgccgttggctttcc  15507100               <---------YAB1            <---------RVE1(1)           <---------ARR11(3)  ---------->DOF2                                                   --------->ARR14(2) <---------AHL20(2)                                                <------ZmHOX2a(1)            <---- ----------->AGL15                                           <---------At4g35610                <---- ------------AGL15                                       <---------REM1(1)         <---------YAB1 --- ------------>AGL3                     ---------->DOF2 --------->YAB1--------->GLK1(1)       <------- --DOF2    --------->ARR11(3)       --------->TOE1(3) <---------ATHB12            *TSS   --------->ANAC58 -GLK1(1)----------->ARR10          --------->TOE2(3) --------->ICU4<---------ARR14(2)   --------->ANAC58   catttaaaggtgagatttttattcgaaaattcaagaacccttaaatcgaagttcaaatgatgaagcagaggatttcgaaattgttatgagcaagttattg  15507200                                                             <---------GLK1(1)                                                       <------MYB83                                                       <---------ANAC46                                                      <---------MYB46(3)         --------->ANAC58                                          <-----------------AGL3                 --------->ANAC46    --------->TOE1(2)                  --------->LBD16<---------AtMYB61     --------->ANAC58   ------>ZmHOX2a(2)                  <---------ANAC46--------->MYB111(2)   --------->ANAC58  <------ZmHOX2a(2)                   <---------ANAC58--------->MYB46(2)--------->ANAC58 <---------ARR14(2)                   <---------ANAC58--------->MYB55(2)--------->ANAC58 -----WRKY18(1)                      --------------->AtSPL8 <---------ARR14(2)   --------->ANAC58 -------GT1       ---------->DOF2    --------------->AtSPL3 --------->ARR14(2)   --------->O2 ----->ZAP1    >>>>>>>>>TBF1       <-----------GT1    --------->MYB111(1)   --------->ANAC46       -- -----CBF   >>>>>>>>>TBF1---------->DOF2 --------->SPL7<------MYB46(1)---------->DOF2           <----   accgatcgtgagaagaagaagaaagaagaaagaaatgtttccgtacaaaatatggtttggtggaaatgccagagaagcacgacacgactctatctgtata  15507300         --------->TOE2(3)      --------->YAB1       ------->TEIL            --------->ZAT6                    <---------AHL20(2)     <---------ZAT14         --------->YAB1                      --------->AHL20(2)     --------->ZAT14       --------->AHL20(2)                <---------YAB1     <---------ZAT18      --------->YAB1                    --------->AHL20(2)     --------->ZAT18    <---------AHL20(2)                  <---------AHL20(2)  <---------ANAC46      --------->AHL20(2)                  <---------AHL20(1)  <---------ANAC58     --------->AHL20(2)                   --------->AHL20(1)  <---------ANAC58     --------->YAB1     <---------HSFB2a(2)--------->AHL20(2) ------->ALFIN1        <---------AHL20(2) --------->HSFB2a(2)<---------AHL20(2) -----AtMYB61      <---------ATHB12 <---------TOE2(3)      --------->YAB1        ----------->RAV1(1)   ggtggagtgaaccctaatccactaattaaaataatactaatgtttcagaaattccttcttaatataatttaagaacaaaacaacaacattgtctgttcaa  15507400                  --------->ANAC46                                                     <---------YAB1               <---------ARR14(2)                                                    --------->ATHB51               --------->ARR14(2)                                                    <---------ICU4         --------->ATHB51                                                            <--------HAHB4        --------->ICU4                                                              <---------YAB1        <---------YAB1       --------->ANAC58                                       --------->ICU4       --------->TOE2(3)     --------->ANAC46                                     --------->YAB1      --------->YAB1         --------->ANAC58                                    <---------YAB1     <      <---------ICU4    ---------->DOF2<----------DOF2    ---------->DOF2     <----------DOF2       <     --------->ICU4   --------->At4g35610              <---------HSFB2a(2) <-----------GT1---------->DOF2     <---------ATHB12 <---------At4g35610              --------->HSFB2a(2)<-----------GT1<---------AHL20(2)   attagcaaacattattgtattcgcagcaaagacgacattgtctttggttttgttttgctggaaagatggacatttttaaacttttcattattaaaagagt  15507500                     <---------YAB1                   <---------AHL20(2)              <---------AHL20(2)              --------->AHL20(2)                                           <---------AHL20(2)    --------->ZAT2--------->AHL20(1)                                      --------->AHL20(2)    <---------ZAT2<---------AHL20(1)                                      <---------AHL20(2)    <---------At4g35610                         --------->YAB1    <----------DOF2    --------->At4g35610            <---------ETT(1)            <-----------GT1 ---------ANAC58  <---------AHL20(2)           --------->ICU4  ---------->ID1                  ------ ---------ANAC58  --------->AHL20(2)      --------->YAB1      <-----------GT1           ----------->GT1   ttgcttagctggctatataatttattagagtttttttccgacaaacaaaatgatcagttttttttttccttttttttttaatagatgggattgtgaaatg  15507600                                                                                                    <                                                                                                   <-                         <---------MYB46(3)                                                        <-                         ----------->GT1                                                          ---                       <---------MYB52(1)                                 <---------YAB1         <---                      <----------DOF2              <-----------GT1   <---------ANAC55(2)     --------             <---------AHL20(2)          ----------->GT1             --------->ANAC55(2)    --------- ----->GT1  --------->AHL20(2)    --------->AHL20(2)      <---------YAB1  --------->ICU4--------->AHL20(2)   taaaattcaaactaataaatgttcctttggttaaaatttaaaactgaaaaaaaaaaccgtatgagtgagtcatgtaatgtttgtaaaacataaaatgatt  15507700  Previous    Next  AGI:  At4g32070.1    Description:  octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein. similar to octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein [Arabidopsis thaliana] (TAIR:AT2G25290.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44319.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide TPR-1 (InterPro:IPR001440); contains InterPro domain Tetratricopeptide TPR2 (InterPro:IPR013105); contains InterPro domain Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); contains I Range:  from: 15504668    to: 15507182    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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