Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->At4g35610                       <---------At4g35610                      ------->TEIL                 <---------ANAC58                            --------->LBD16                 <---------ANAC46                            XXXXXXXXXXXXXXXXXXXX>MIR832-5P                 <---------ANAC58                           --------->LBD16             <---------ANAC58                            <---------GLK1(1)             <---------ANAC58                            <------ZmHOX2a(2)             <---------ANAC46                           --------->ARR14(2)         <---------HSFC1(2)                             <---------ARR14(2)         <---------HSFB2a(1)                        <-------MYC3       --------->GLK1(1) ---YAB1 --------->HSFB2a(1)                        ------->MYC3   --------->YAB1        <-----------ARR10 -ICU4   --------->HSFC1(2)                <----------DOF2------>ZmHOX2a(2)          <---------At4g35610   gagcgattagaagtttcttgtgtgcatctaacttgtgttcttggcctttgcccatgtggatccctgaaatcagaaatcaaacgcttgagctaatcttctc  15476300                                                                        <---------ANAC55(2)                                                                        <---------ANAC46                                                                        --------->ANAC55(2)                                <---------HSFB2a(2)                    <-------TEIL                               ------>ZmHOX2a(2)                      --------->CCA1(2)                              <------ZmHOX2a(2)                      --------->ARR11(1)                             <---------ARR14(2)                      --------->ARR14(2)                             --------->ARR14(2)                      <---------ARR14(2)            --    <---------MYB59          --------->ARR11(3)                     --------->CCA1(2)              <-  ------->TEIL               <---------ARR11(3)         --------->MYB52(1)                  <-------- <---------CCA1(2)     ---------->DOF2       <---------KAN4(2) ---------->DOF2           <-----------GT1   actgtatctaatttctgaattatcccaaagggatctagatgagaaggaattttcagaataactgataaagagatacgtagaagatagcaattcactcatt  15476400                                ---------->DOF2                              --------->AHL20(2)                              <---------AHL20(2)                          <---------YAB1                    <---------ANAC58                    <---------ANAC55(2)                    <---------ANAC55(1) <---------ARR14(2)                    <---------ANAC58    <---------GLK1(2)               --------->WOX13(1)       --------->ARR14(2)  --------->ZAT2    <---------ANAC46    <---------ARR11(3)             <<<<<<<<<GATA-1  <---------At4g35610     --------->AHL20(2) --------->ATHB12          <<<<<<<<<GATA-4  --------->At4g35610     <---------AHL20(2)<---------YAB1             <<<<<<<<<GATA-2 ------->At4g35610  --------->ANAC55(2) --------->ARR11(3)             <<<<<<<<<GATA-3     <---------AtLEC2 --------At4g35610 <-----------------------TaNAC69(2)                --------->WOX13(1)  --------->ANAC58 -ATHB12 --------->YAB1------->TEIL   ----------->ARR10            <------ZmHOX2a(2)     --------->ANAC58   cagcagctcaaaaatagcaattacgtatataattaaaagtcagattttcattggtttactaaaacacagatcaatccacaaaaaaaaacataagcatgga  15476500                                                                                                    <                                                                                                  ---                                                                                                  <--                                                                                                  ---                                                                                                 ----                                                                                        <---------ARR14(2)                             --------->ANAC58                                ----------->GT1     <---                             --------->ANAC58    <------ZmHOX2a(1)      --------->At4g35610    ------                <---------LBD16         <---------ZAT6            ---------->DOF2---------->DOF2<----               ----------->RAV1(2)--------->AtLEC2  ---------->DOF2   <-----------RAV1(2)  --------->ZAT6  <------ZmHOX2a(1)    ---------->DOF2  ----------->GT1          ----------->HVH21      --------->ARR14(2)   tagaggaagagagagatacctggagaaaaggaagccatggaagtgtaaacaggagaaagagaaggctgtgaagcaggtgaagtaaaagcagaaacactaa  15476600 ---------YAB1 ------>YAB1                                                <-----------GT1 -------ICU4                      >>>>>>>>>TBF1          <---------CCA1(2)                       ---- ----->HAHB4                   >>>>>>>>>TBF1   <-----------ARR10                                 <--- ----->ICU4                 >>>>>>>>>TBF1      --------->ARR11(3)                <---------AHL20(2) ------ATHB12      --------->TOE1(3)           <---------ARR11(3)               <---------YAB1   <--- --->YAB1        <---------ARR11(3)            --------->GLK1(2)      <----------DOF2           <---- -----TOE2(3)    --------->ARR11(3)           <---------GLK1(2)   <---------GLK1(2)      ---------->DOF2   tgatgaattcaagaacagagaccttaagaagaagaagaagaagatgaagaatctttcccatttctccagactctttgggatttttaatggtgaaagagag  15476700                                                                                         <---------AHL20(2)                                                                                        --------->AHL20(2)                                                                                     --------->YAB1                                                                                  <----------DOF2                                                                               ------>ZmHOX2a(2)                                                                              <------ZmHOX2a(2)                                                                              --------->GLK1(1)            <---------ZAT6                                                   --------->ARR14(2)            --------->ALFIN1                                                 <---------ARR11(3)        <---------ZAT14                                                      <---------ARR14(2)        --------->ZAT14                                                      --------->ARR11(3) ----->ARR11(3)                                                              <---------ARR14(3) ------GLK1(2)                                                              --------->GLK1(1) ------ARR11(3)           <------------CBF                                  <---------GLK1(1) -----RVE1(1)      --------->GLK1(2)                           <----------DOF2<---------GLK1(1)   <--   attttctaagagcagtgtgagaatgtgagattgctcttccaagattaatctctctctcgctctctctttctctaatggagatctctttcataaaattttg  15476800                                        <------MYB46(1)                                        <------MYB83        <---------ANAC58              --------->ALFIN1      <---------ICU4        <---------ANAC58      --------->At4g35610          --------->ICU4               <---------ATHB12      <-----------GT1         <---------At4g35610          <---------ATHB12      --------->YAB1  <----------DOF2   --------->DAG2 --------->DAG2 --------->DAG2                <---------YAB1  ----- ---------GT1      ---------->DOF2---------->DOF2---------->DOF2            <----------DOF2    <-----   tttccttttttcttgtctgcataaaggagggaagcagaaagtgggttttaaaaaagtcgaaatcattctctctaacttctttatcatcaaatcaacatgt  15476900                                 <---------AHL20(2)                                 --------->AHL20(2)                                --------->AHL20(2)                                <---------AHL20(2)                               <---------YAB1                             <---------ICU4                             -------->ATHB1                            --------->AHL20(2)                            --------->ICU4                            <---------ATHB51          ----------->GT1                   <---------ZAT18            --------->MYB46(3)                           <---------AHL20(2)                   --------->ZAT18         ------>ZmHOX2a(1)      <---------YAB1           --------->AHL20(2) ------>HVH21      --------->ZAT14        <---------MYB59  ---------->DOF2                --------->AHL20(2) ------HVH21<---------YAB1  <---------AHL20(2)----------------->AGL3         ------->TEIL<---------AHL20(2)   gagagggtttgaatgtgatagtgaacacaaattattaaattcttcctaaccaaaaacagtttaaagtgatcaatgtatgaatttcttatattttaaatta  15477000                   ------->TEIL                --------->ANAC58                --------->ANAC46                --------->ANAC58                                          ----------->GT1     <---------AHL20(2)                                                --------->WRKY18(1)    <---------AHL20(2)                                              --------->ALFIN1    <---------AHL20(1)                                    <---------AHL20(2)    --------->AHL20(2)                                   <---------AHL20(2)             <----------DOF2    --------->AHL20(1)----------->GT1                    --------->AHL20(2)   --------->AHL20(2)   gaacaatttattcaaaacacgaatttgtaacttgggccactactaaaacttctgaagaataaaatttagagtggtcaagttaaaatatgcctttgtaact  15477100                                                                                            <--------                   --------->At4g35610                                                      <--------              ----------->HVH21                                                           --------->WOX13(1)          <---------ZAT14   <---------WRKY18(1)                                         <<<<<<<<<<WRKY26          --------->ZAT14  --------->WRKY12 --------->MYB46(3)                 ---------->ID1  <-----         <---------DAG2    --------->WRKY45 --------->DEAR3(2)       <---------MYB52(1) <<<<<<<<<<WRKY43         <----------DOF2   --------->WRKY38(1)----------->RAV1(1)  <---------ANAC58     <<<<<<<<<<WRKY38      <-----------GT1  --------->DAG2 <-----------HVH21            <---------ANAC58<----------DOF2  <     <---------ZAT14  ---------->DOF2<---------ANAC46          <----------DOF2<-----------GT1--------   tgaagagtttactttactgacagcaaaagttgaccagttgtgtcaaaccgacagaaataagaagactttccgttttgttttttctctttggtcaattatg  15477200  Previous    Next  AGI:  At4g32000.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G25220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44295.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 15474068    to: 15476661    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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