Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <------ZmHOX2a(1)                       ------>ZmHOX2a(1)     ---------->DOF2       <----------DOF2                        <---------ANAC58 ------ZAT18              <---------ANAC58                        <---------ANAC58                 -- ----->ZAT18          <----------DOF2                        <----------DOF2                      --- >CCA1(2) ---------->DOF2 <---------ANAC58    --------->At4g35610<---------At4g35610             ----   gcactaacaaagaaaagagagtacctttgcttttaggaacgggttcgaagcagaagttccaagctttagcttatcctgttcaagtttaatcgaaaacaaa  15473400                                                                  ----------->GT1         <---------YAB1               <---------ARR14(2)        <---------ANAC58                -----     <---------GLK1(2)          <-----------GT1                 <---------ANAC58                <----     --------->ARR11(3)----------->GT1--------->ARR14(2)      ------->TEIL               <---------ZAT14     <---------ARR11(3)<---------ANAC55(2)                --------->DAG2                 --------->ZAT14   ----------->ARR10   <---------ANAC46                  ---------->DOF2          ----------->HVH21 --------->GT1         <---------ANAC58              <---------------------WRI1  --------->At5g28300 ------>DAG2           --------->ANAC55(2)          ----------->GT1           --------->LBD16   ----- ------>DOF2           <---------ANAC58          --------->MYB52(1)         <---------LBD16  --------   aaagtaagattttgaataaactgatgcgtaatttctaccatatactcgatagaacggcgaaaagtaccttgttaatctcgcgcggtaacagagaagtgga  15473500                                                            ===============================HOX2a_HOX2a                                                            ------>ZmHOX2a(2)                                                           --------->GLK1(1)                                                           <------ZmHOX2a(2)                                                           ================================HOX2a_HOX2a                                                          <---------ARR14(2)                                                          --------->ARR14(2)                                                          <---------ARR11(3)                                                          --------->ARR11(3)                                                          <---------AGP1                          <---------GLK1(2)              <---------CCA1(2)           <---------ARR14(2)                  --------->ANAC58                  --------->ZAT18                  --------->ARR14(2)          --------->TOE2(3)                         --------->ZAT14    --------->ZAT18 ---->ARR14(2)    --------->ANAC58                  <---------ZAT14    <---------ZAT18              - -----ARR14(2)<---------TOE2(3)                 <-----------GT1        --------->ZAT14  --------->ANAC58 ---->TCP20  ---------->DOF2                    --------->MYB52(1)     <---------ZAT14  --------->ANAC58 ->ALFIN1 --------->TOE1(3)                    --------->AHL20(2) <---------ATHB12  <------ZmHOX2a(1)   accgagagataacattaaagaagccatggaatcgctatggagcacaaaattaactgcacagatctcaaatcagtgaactagtgcgaggataagcaattcc  15473600                                                                         <---------O2                                                                         --------->At4g35610                                   --------->ANAC55(2)                   <---------ZAT2                                   --------->O2                          ----------->RAV1(2)                      --------->ANAC46                                   <---------At4g35610      <--             --------->bZIP60(1)   <---------ANAC55(2)       <---------At4g35610                  ---             <---------bZIP60(1)   <---------O2              --------->At4g35610              -------           --------->YAB1          --------->ANAC46          <---------ZAT2                  <-------          <---------ATHB12    --------->YAB1            <---------At4g35610                 <--------          --------->ICU4     <---------YAB1       <-----------ARR10  <-----------HVH21  <---------GLK1(2) -------->YAB1     ------>ZmHOX2a(2)     <----------DOF2--------->At4g35610           ----------->ARR10   aaaaataagacaatgatgtgatccacaaaatatgatcacgagactttgtgagtattttagcagagctgatttgtcacctggacttggttagaatcgcgcg  15473700               <------ZmHOX2a(2)              --------->AGP1              --------->ARR14(2)              <---------ARR14(2)     <---------DOF5.7(2)   --------->DOF5.7(2) -------ARR14(2) ------>ARR14(2)                                                            --------->ANAC46 -->LBD16 <------ZmHOX2a(2)                                     --------->ANAC58 --ANAC46<-----------HVH21                                      --------->ANAC58                   <- -LBD16 ------->GAMYB          ---------->DOF2        *TSS  --------->CCA1(2)                      <-   gtttcgataacgatcagatcgagagattgaagaaaaagattaacaaggattcaacgagagagagacacgacgatgtctacgaagttgttctcacttctca  15473800                                                                                           <-------TEIL                                                                                        <---------MYB46(3)                   <---------ARR11(3)                                              <---------YAB1  --                   --------->ARR11(3)                           ----------->GT1 <---------YAB1   ----       --------->ATHB12                   ---------->DOF2   <---------MYB46(3)----------->GT1 -------      <---------YAB1           <------ZmHOX2a(1)        <---------MYB46(3)  <---------ANAC58  ------- --------ANAC58  ----------->ARR10  <---------YAB1     --------->ALFIN1     <---------ANAC58  ------- --------ANAC58<--------P    <---------TOE2(3)      --------->DAG2          <---------ANAC46  -------   ggcttgtcttgataggggtaagatagtcatttaggattatgtttaaaagttgaaagagtggatggatggatactagtggattgtgattagtggttcatgc  15473900       --------->AHL20(2)      <---------WOX13(1)   --------->AHL20(2)   <---------AHL20(1)                                                        --------->ARR14(2)   <---------AHL20(2)                        --------->WOX13(1)              <---------ARR14(2)   --------->AHL20(1)                      <---------AHL20(2)           ----------->GT1 ------->ICU4                           --------->AHL20(1)       --------->YAB1 ------->RAV1(1)                     --------->AHL20(2)          <---------ICU4 -->AtLEC2                 --------->bZIP60(1)       <-----------GT1--------->YAB1 -->ANAC58              <---------ZAT6  <---------AHL20(1)      --------->ICU4 -->ANAC46     <-----------GT1       <---------AHL20(2)         <---------ATHB51                   <- -->ANAC58  <---------ICU4 <---------bZIP60(1) <---------ATHB12 <---------ATHB12           ------>ZmHOX2a(1)   aacaattaattgaatatttacacttagtgacaacacaatttatatattaatcaatttacaaatacaataatgacaagtgaatacccttctgtcctcacat  15474000                             <---------ATHB12                           --------->WOX13(1)             --------->AHL20(2)             --------->AHL20(1)     <------ZmHOX2a(2)                     <---------AHL20(2)             <---------AHL20(2)    <---------ARR11(3)                   <---------YAB1            --------->AHL20(2)    --------->GLK1(1)                  <---------AHL20(1)            <---------AHL20(2)--------->YAB1                 --------->ANAC58  --------->TOE2(3)      --------->LBD16   --------->ANAC58                ---------->DOF2 <---------AHL20(2)     --------->ANAC46   --------->ANAC46         ------------------------>ANAC81     <---------ATHB12 <-----------GT1        --------->ANAC58   --------->At5g28300       --------->AHL20(1)       <------ ----------GT1        ---------->DOF2     ----------->GT1    --------->ANAC58<---------AHL20(2)------   ttttcacccccaaattaaattactcaaagcaatcagagatcaaactgtaaaattcaaaaaaagaagcaaaaaatattattttcttaaatcaagacgatga  15474100                                     --------->MYB52(1)                                   --------->MYB46(3)                                 --------->ARR14(2)                                 <---------ARR14(2)                               --------->LBD16                                                      -                              <---------HSFB2a(2)                           <---------ETT(2)     ----                              --------->HSFB2a(2)                        ------->GAMYB <---------ARR14(2)      <---------LBD16        <---------LBD16                             ============================    <-----------GT1         --------->MYB52(1)                          --------->MYB46(3)       <--- ---YAB1--------->LBD16 --------->ZAT6                                --------->MYB52(1)  <---------YAB1 --->YAB1            ------>ZmHOX2a(1)               <---------ZAT14<---------YAB1     --------->ARR14(2)   tggtattaaccggagagtccctcctagctctaccggaaccaatggaactagtgagtgaagaacatcggttatcaacggtcgataactcggttctggttgt  15474200                      --------->At4g35610                      <---------ZAT2                      --------->O2                      <---------At4g35610                      ----------->RAV1(2)                     ------>NtERF2                    <---------ALFIN1                  ------>NtERF2               --------->At4g35610               --------->ZAT2               <---------At4g35610             --------->ANAC58             --------->TGA1a                                                       <---------GLK1(2)             --------->O2                        <-----------GT1                   --------->ARR14(2)           <---------ALFIN1             --------->LBD16                            <---------ARR14(2)         <-----------HVH21       <---------AHL20(2)                           ------>MYB46(1) ---------->DOF2  <---------ATERF1(1) <---------LBD16                         ------>MYB83 ======================bZIP_DOF --------->AHL20(1)                            --------->MYB52(1) -------->ANAC46 <---------ATERF1(1)<-----------GT1<---------ANAC58        --------->MYB46(3) ----->ZAT18 --------->ANAC58   --------->AHL20(2) --------->ANAC55(2)   <-----------GT1 ======================MYC_MYB  <---------AHL20(2) <---------ANAC58   --------->ANAC55(2) ------ZAT18<---------LBD16     <---------AHL20(1)<---------TOE2(3)   <---------ANAC55(2)   acacaaagcactgccacggctgccacctgaacaatttatttccggttttatttacgtttcaacacaaaaaatatgtaaccaatcggatttttaagcctaa  15474300  Previous    Next  AGI:  At4g31990.1    Description:  ASP5 (ASPARTATE AMINOTRANSFERASE 5). Identical to Aspartate aminotransferase, chloroplast precursor (ASP5) [Arabidopsis Thaliana] (GB:P46248;GB:O49392;GB:Q8LGE6); similar to ASP2 (ASPARTATE AMINOTRANSFERASE 2) [Arabidopsis thaliana] (TAIR:AT5G19550.1); similar to aspartate aminotransferase-like [Solanum tuberosum] (GB:ABB55364.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76227.1); similar to aspartate aminotransferase [Medicago sativa] (GB:AAB46611.1); contains InterPro domain Aspartate/other aminotransferase; (InterPro:IPR000796); contains InterPro domain Aminotransferases, class-I, pyridoxal-phosphate-binding site; (InterPro Range:  from: 15470820    to: 15473754    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g32000.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT2G25220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44295.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271); contains InterPro domain Tyrosine protein kinase; (InterPro:IPR001245) Range:  from: 15474068    to: 15476661    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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