Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    -------------------                                                                               >>>>>>>>>TBF1                                                                           --------->LBD16                              --------->GLK1(1)                        --------->GLK1(2)                           --------->LBD16     --------->AtLEC2        ------->TEIL --------->CCA1(2)        <---------HSFB2a(2) <-------MYC2             <---------ARR14(2)           - ----------ID1            --------->HSFB2a(2) <-------MYC3             --------->ARR14(2)           = ----->DOF2          <---------AHL20(2)       ------->MYC3          --------->ANAC58          ------- -->GT1             --------->AHL20(2)        ------->MYC2          --------->ANAC58         --------   aagagacgaaggaaacagagcattaaatccagaaatcgagagtaaacacatgcacagacttagcattgccacgaatccgaagaagaagaccaaaataaaa  15423800                                            --------->ANAC58                                        <-----------HVH21                                       --------->bZIP60(1)                                       --------->TGA1a                                       <---------bZIP60(1)                    <---------REM1(1)  <---------O2                  <------MYB83         --------->O2                  <------MYB46(1)      --------->ANAC58                 <---------DEAR3(1)    --------->ANAC46                 --------->ALFIN1      <---------ANAC55(2)                 <---------AtMYB61     <---------TGA1a              --------->ALFIN1         --------->ANAC58         ---------->DOF2   --------->At4g35610 ---------->DOF2                <------NtERF2       ---    <----------ID1<---------MYB46(3)   ===================bZIP_DOF            ----------->GT1     <-- ----->ANAC81 <---------DEAR3(1)  <---------At4g35610                        <---------MYB46(3)   --- --------->DOF2 <---------ABI4(1) --------->At4g35610                       <---------ANAC58      <-- ================================================bZIP_DOF                   <---------ANAC46    <---- --->DOF2========================================bZIP_DOF                   <---------ANAC58   ------ ->AHL20(2)--------->DAG2<------ZmHOX2a(1)  --------->ANAC58        <---------ZAT14      <----------DOF2   gagaaagaaacaaaagggggtggtgaaggagatgagagctcacgtcaaggaaagagagaagctcatcgagtgaagaaggcgggtcaataagcttttcccc  15423900                                                                                   ------->TEIL                                                                                   <---------ARR11(1)                                                                                   --------->ARR14(2)                                                                                   <---------ARR14(2)       --------->GLK1(2)         <---------ARR14(2)                               <---------ARR14(1)-      --------->YAB1             --------->ARR14(2)                               <---------CCA1(2) <     <---------ATHB12            --------->GLK1(2)                              <---------ANAC55(1) < ------>ZAT2    <---------HSFB2a(2) <---------ETT(1)                            <---------ANAC46   <- -------ZAT2    --------->HSFB2a(2) --------->ANAC46                            --------->ANAC55(2)<- ------>At4g35610               <---------GLK1(2)                               <---------ANAC55(2)-- -------At4g35610    <---------ARR11(3)--------->O2    <---------TOE1(2)        <---------ANAC58   <- -----ALFIN1<---------GLK1(2)--------->YAB1     ------>ZmHOX2a(1)               <---------ANAC58   -- --->LBD16<---------YAB1<----------DOF2<---------O2   ------>ZmHOX2a(1)    <----------DOF2  ---------   agcttcaataatctgattctcgagctctttatcagaatccgacatgactccttctcctagttttctgactcgtttcgctcttgcgtatctacaattgaat  15424000                                                                                      --------->CCA1(2)                                                                                 ---------->DOF2     ------>ZmHOX2a(1)                                                   --------->LBD16 ------>ZmHOX2a(2)                                                      <---------------AGL15 -------->GLK1(1)                 --------->ARR14(2)                    --------------->AGL15 ---------GLK1(1)                 <---------ARR14(2)                   <-----------------AGL1 ------ZmHOX2a(2)    <-------TEIL --------->GLK1(1)                    ----------------->AGL1 --------ARR14(2)   --------->ARR14(1)                                 <-----------------AGL2 --------AGP1      --------->ARR14(2)                 ---------->DOF2  ----------------->AGL2 ------->ARR14(2)  --------->ARR11(1)      ----------->RAV1(1)         ----------------->AGL3 --------ARR11(3)  <---------ARR14(2)    --------->At4g35610           <-----------------AG ------->ARR11(3)  <---------GLK1(2)     <---------At4g35610           ----------------->AG        -- >AHL20(2)       ----------->ARR10<---------GLK1(1) --------->TOE2(3)  <-----------------AGL3      <-   agatctcctctacaaaccctagattcgaaaacagagaattctcagcaccaaaaacctaaagcttccattgaattccacaaatggaaagagatgagaagac  15424100                                 ---------->DOF2  --------->ANAC58                       *TSS                             --------->ANAC46     --------->ANAC58                     <-------------                         <-----------GT1          --------->ANAC46                    <--------------             --------->TOE1(2)--------->ANAC46  <---------ALFIN1           --------->At4g35610 ------->ARR14(2)<---------HSFB2a(2)      --------->ZAT14                  <---------At4g35610 --------ARR14(2)--------->HSFB2a(2)      <---------ZAT14       <-----------GT1    <----------DOF2 <-   ggatttagcgaagaaactacgagaaattttccccccaaagtcactgaacaacacgctagggttttttttcttctctccgctctctctttttttttttttt  15424200                                                                                     ---------->DOF2                                                                                 <---------MYB52(1)                                                                                <-------GAMYB                                                                               <---------ANAC46                                                        >>>>>>>>>>GT-3b        ----------->GT1    <--              --------->TOE2(3)                 ----------->GT1               <------NtERF2   -------              --------->YAB1                   --------->DAG2               ------->GAMYB --------->CCA1(2)         ------------>CBF            ----------->GT1 ----------->GT1       --------->MYB46(3) <------ -----------ANAC81     --------->ZAT14        ---------->DOF2  <------ZmHOX2a(1)--------->At5g28300 ----------ANAC81      <---------ZAT14 ------------------------>ANAC81  ---------->DOF2  --------->ARR11(3) --------ZAT18--------->TOE1(3)    ---------->DOF2 ---------->DOF2     ------>ZmHOX2a(1) <---------ARR11(3)   gttcgctctctctcaatcttaacagtttacagaaaactaaagaaaaaaaaaagtaaagaaaaataggagagtcctcaagcgccgttaaaaagatatatat  15424300                                                  <---------AHL20(2)                                                 <---------AHL20(1)                                          --------->ANAC58                                          --------->ANAC58                                          --------->ANAC46                                         --------->SPL7          --------->AHL20(2)           <---------ZAT14         --------->AHL20(2)            <---------SPL7     --------->AHL20(2)              <---------------AtSPL3                                         <     <---------AHL20(2)             <---------ANAC46      <------MYB46(1)                       <----   <----------DOF2          <---------AHL20(2)   --------->AHL20(1)                            <-----  <---------ICU4           --------->AHL20(2)    <---------AHL20(2)                          <------- -------AHL20(2)         ------->TEIL<---------------AtSPL8                                <---------AHL20(2) -->AHL20(2) --------->AHL20(2)     <------MYB46(1)       <------MYB83                     --------->AHL20(2) ---AHL20(2) <---------AHL20(2)     <------MYB83 --------->AHL20(2)  ----------->HVH21    --------->AHL20(2)   ataatctttaaataaaaaaatgggatgtatttaatatttggtgtacggcaatttattagttggtcgtctatttgacgagatgtgtttcttcatttatttt  15424400                             --------->HSFB2a(2)         <---------------AGL15     <----------DOF2         <---------HSFB2a(2)          <---------ARR14(2)    <------------------------ANAC81                      <---------GLK1(1)             <---------LBD16 -----------GT1        --------->AHL20(2)                --------->GLK1(1)       <---------DAG2<----- -----YAB1 <----------DOF2<---------YAB1             --------->ANAC58            <----------DOF2  <-- ----AHL20(2)          <---------AHL20(2)            <---------TOE2(3)       ---------->ID1--------->ARR14(2) --YAB1  --------------->AGL15                       --------->ANAC58       <-----------GT1<---------ARR14(2)   tatttctctttctcttttatggaatttttttatagaaaaatggaatacaaaaatcaaggaaatccagtattgcgattttttccctttatttcggatttta  15424500                                      <---------CCA1(2)                                      <---------GLK1(1)                          --------->ATHB51                          --------->ATHB12                          <---------ICU4                         <---------YAB1                                             -------->P                         --------->ICU4        --------->AHL20(2)                  <-----------GT1                    --------->At4g35610--------->ARR14(2)         <---------YAB1   --------->WOX13(1)                    <---------At4g35610<---------ARR14(2)      --------->ICU4  <-----------GT1                 <--------P         --------->YAB1   <---------AHL20(2)   <---------DAG2              <---------TOE2(3)  <----------DOF2    --------->AHL20(1)    <----------DOF2 ------GT1    <---------TOE2(2) <---------ANAC58    <---------AHL20(1)   <---------ANAC58 --------DOF2<-----------RAV1(2)<---------ANAC58 --------->AHL20(2)      <---------ANAC58   ctttagattataaactcaggttagctcattatttgctttcatatccgatttttatatattttgtgagtattatttgcttttttatcaaccagactcacat  15424600                                            --------->LBD16                              ---------->DOF2                         ----------->GT1    ------>ZmHOX2a(1)                        <-----------------------TaNAC69(2)                   <---------AHL20(2)   --------->ARR11(3)                  --------->YAB1  <------ZmHOX2a(1)                                              ----                 --------->AHL20(2)  --------->AHL20(2)                                  ----------->GT1             <---------AHL20(2)   ----------->GT1                                    <---------TOE2(3)             --------->AHL20(2)  ----------->GT1                                    ---------->DOF2             --------->AHL20(1) <---------TOE2(3)      --------->AHL20(2)  ----------->HVH21>>>>>>>>>   gaagcatatgaaaaataaaataaaaatgagtataaaggataaaatcctgaaaaacaaatatatgtagaaatttgtagttgacatattaaagaagaaaaat  15424700  Previous    Next  AGI:  At4g31880.1    Description:  binding. similar to binding [Arabidopsis thaliana] (TAIR:AT1G15940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44270.1); contains domain PTHR12663 (PTHR12663); contains domain SSF63748 (SSF63748) Range:  from: 15419410    to: 15424189    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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