Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                            <---------At5g28300                                                        --------->ATHB12          --------->TOE2(3)                                                   --------->ARR11(3)             --------->TOE1(3)                                                  <------NtERF2                  <---------HSFB2a(1)                                                  --------->At4g35610            --------->HSFC1(2)                                                  <---------ZAT2<----------DOF2  <---------HSFC1(2)                                                  <---------At4g35610          --------->ARR14(2)                                                 <<<<<<<<<AtERF-3              <---------ARR14(2)   -            ---------->DOF2                      <<<<<<<<<AtERF-4         ----------->RAV1(1)     ---         <------NtERF2                   <---------TOE2(3)      <---------DAG2 <---------GLK1(2)  <--   ataccataggcgcagaaagagcattgagagaagatgggttattgagaatggcagctcttgatttagcttttccttccaccagaaccttcaattacagcaa  15390000                                           --------->LBD16             ---------->DOF2        --------->ZAT6     --------->ATHB12       ----------->GT1     --------->GLK1(1)        --------->ANAC55(2)                             - -------->TOE2(3)     <-------TEIL<-----------GT1   <---------ANAC55(2)                        ------ ------>ARR11(3)  <---------------AtSPL8  --------->HSFB2a(2)              <------ZmHOX2a(2)--------- -------ARR11(3)  <---------------AtSPL3  <---------HSFB2a(2)<---------GLK1(2)              ---------   aatctcaaattgataaaaaggaagtacagatttcatttacactcccagaaaatcaagtgattagaatcccatttacgatcaatttagataacaatgttaa  15390100                                                   ---------->DOF2                                             --------->LBD16                                            --------->ANAC46                                           ------>ZmHOX2a(2)                                          <------ZmHOX2a(2)                                          --------->CCA1(2)                                   -------                                          --------->ARR14(1)                                 --------                                         <---------ARR14(2)                                 <--------                                         --------->ARR11(1)                              --------->At4g35610                                         --------->ARR11(3)                             ----------->HVH21                                         --------->ARR14(2)                           --------->At4g35610                                         <---------ARR11(3)                           ----------->RAV1(2)    <---------HSFB2a(2)                 --------->HSFB2a(1)                           <---------At4g35610 -------->GLK1(1)                       <---------HSFC1(2)        ----------->RAV1(2)------->TEIL ---->DOF2             ---------->DOF2  <---------HSFB2a(1)----------->GT1     <---------ARR14(2) >YAB1  --------->MYB52(1)             ---------->TaMYB80  <----------ID1      --------->ARR14(2) >TOE2(3)         --------->YAB1       ----------->ARR10<----------ID1        <---------GLK1(1)   agagttccacaaacagactatcaaattaagcacatttagggaagatccgaaacaaaagaagacgaaaaacctggtcttcgaaatctgcatctgatgcgga  15390200                                                                                                   <-                                                                                                  <--                                                                                             <-------                                           ------->TEIL                                      <-------                                          ------>MYB83                                       <-------                          <---------HSFB2a(2)                                                --------                          --------->HSFB2a(2)             <-------TEIL ------>ZmHOX2a(1)     --------                --------->DAG2            ------>MYB46(1) --------->ZAT18                   <-------- -->LBD16 <---------At4g35610           <---------MYB59   <---------ZAT18                   <-------- ->ANAC55(2)   ---------->DOF2--------->ANAC58            <---------ZAT14     <----------DOF2<------- -LBD16   --------->At4g35610 --------->ANAC58            --------->ZAT14---------->DOF2  <---------AtLEC2   atagtttgggagagcagaaaagcgtcttccataagaaacagaccgaacccattgtaagggttcactcactctcctcaaagctttcactgtttgcatatct  15390300                                                                                ==================HOX2a_HOX2a                                                                        <---------MYB52(1)                                                                       --------->LBD16                                                                      <---------DEAR3(1)                                                                      --------->DEAR3(1)                                                                      --------->ATERF1(2)                                                                     --------->ATERF1(1)   <------ZmHOX2a(2)      ----------------------->TaNAC69(2)                             <------NtERF2        --------->ARR11(3) ----------HVH21                                                    <------NtERF2         <---------ARR11(3) ---------RAV1(1)                                                   ------>NtERF2   --------->ANAC46 ----ARR10                                                          <---------ATERF1(1)  --------->At4g35610 --ARR11(3)         ------>NtERF2                                  <---------DEAR3(1)    <---------At4g35610 --ARR14(2)        --------->ANAC58                                --------->DEAR3(1)<-----------HVH21 ->ARR14(2)        --------->ANAC46                                --------->ATERF1(2)<---------MYB52(1) ->ARR11(3)        --------->ANAC58                                <---------ATERF1(2)<------NtERF2 -CCA1(2)   --------->HSFB2a(2)                           --------->ANAC58      ------>ZmHOX2a(1) -GLK1(1)   <---------HSFB2a(2)   --------->LBD16         --------->ANAC58<---------MYB46(3) --ARR11(1)<---------ETT(2)   <---------ARR14(2) <-----------GT1  <---------RAP2.6(2)<---------RAP2.6(3)   ctgtcgctctccgtcgagaagacgcctctgtgtttccgagggttttgggttttgcctctcaagctatggccgccggtgattcctagccgtcagatcattt  15390400                                                                                                    <                                                                                                    -                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   <-                                       <------ZmHOX2a(2)                        <------ZmHOX2a(2)  <-                                     <------ZmHOX2a(1)                          <---------YAB1     --                                   <---------TOE1(2)                           <---------ARR11(3)  <-                                   <---------TOE2(2)                --------->DAG2    <---------ANAC58    --------->YAB1<---------ZAT6 --------->TOE2(2)                 ---------->DOF2    <---------ANAC58  *TSS  <------------CBF         --------->TOE1(2)      <------------CBF       --------->ARR11(3)----   ccacaatcgaaattgaactagtctaaactctaaaacgtaggatcacttatgagcccaagattgagcccataaggcccaagagatcatagcttagcccata  15390500 ------>ZmHOX2a(2) ------ZmHOX2a(2)                                    <---------WOX13(1) -------->CCA1(2)                                  <--------ATHB1 ------->ARR11(3)                                  -------->ATHB1 --------ARR11(3)                                  <---------ICU4 ------->ARR14(2)                                  <------------ATHB5                      --------->ZAT6 --------AGP1                              <---------ATHB12    --------->ANAC46   --------->WOX13(1) --------ARR14(2)                <---------YAB1    --------->ATHB12           <---------ANAC46 ------->AGP1                --------->AHL20(1)   <---------ATHB12            <---------ANAC58 ----------ARR10             <---------AHL20(1)   <---------YAB1              <---------ANAC58 ------->ARR10               --------->ARR11(3)   --------->ICU4  ----------->RAV1(1)   <----------DOF2   agatctgagttttagtctcactaatgtggaatattttgatgactaatgaacaatgattgacaaacaaacaacaaaacatgtcgtccatcactttcactaa  15390600                                                                      <---------TOE2(3)                                                                     ---------->DOF2               ----------->RAV1(1)                                  --------->AHL20(2)         <---------DOF5.7(2)                                <----------DOF2        --------->ZAT6         --------->MYB52(1)                                <---------ICU4     --------->ANAC46       --------->DOF5.7(2)           <---------ANAC55(2) <---------ARR11(3)   --------->ANAC55(1)   ---------->DOF2                   --------->ANAC55(2) --------->ARR11(3)   --------->ANAC55(2) <----------DOF2             --------->TOE2(3)  ----------->GT1 <---------YAB1<---------ANAC55(2)   <   tcgcttaaagttaacgacaacaaattcaaaacattagtcatgtaatgaaacagttaacaaatctttacgattaaagaaacacataacacaacttcatcag  15390700                                   --------->YAB1                                --------->YAB1                          <---------ARR11(3)                          --------->ARR11(3)                                                 --------                     --------->TOE1(2)                  <---------ANAC58                     --------                     --------->TOE2(3)                  <---------GLK1(2)           ------>NtERF2                 --------->GLK1(1)<---------YAB1   --------->YAB1                  <---------ALFIN1           -------->P--------->TOE2(2)            <---------YAB1                  --------->MYB46(3)         --------->MYB46(3)<------ZmHOX2a(2)    --------->TOE2(3)     --------->GLK1(2)    <---------       <-----------GT1------>ZmHOX2a(1)         --------->TOE1(3)    <---------GLK1(2)  --------->ARR14(2)    --------->YAB1--------->ARR14(2)            --------->YAB1<----------DOF2     <---------MYB55(2) ---------AHL20(2)<---------ARR14(2)   ----------->GT1  <---------ANAC58      <-----------GT1--------   ttttaattttaactaccacaaatcctaagatcacttataataagttacaaccataatagcttctctttacaaattctgtttctccccaccgattcacgat  15390800                 <------NtERF2                --------->HSFB2a(2)                <---------HSFB2a(2)               <---------ANAC46              --------->ALFIN1              --------->ATERF1(1)              <------NtERF2             ------>NtERF2             <---------SPL7             <-----------HVH21            <---------ANAC46            <---------DEAR3(1)            <---------O2            --------->O2            --------->DEAR3(1)           <------NtERF2           ------>NtERF2                              <---------ZAT18           --------->ATERF1(1)                   <----------DOF2           --------->RAP2.3(1)                ------>NtERF2          <---------RAP2.3(1)                 <------NtERF2            --------->TOE2(3)          <---------ATERF1(1)                <---------ZAT18           --------->TOE1(3)        --------->At4g35610                 <---------ANAC58  --------->LBD16        <---------At4g35610                 <---------ANAC46 <---------HSFC1(1)        <---------LBD16                  <---------DEAR3(1)  <---------HSFB2a(2) ->ANAC58 ------>NtERF2   --------->STY1(2) <---------ANAC58 --------->HSFC1(1) ->ANAC58<---------RAP2.3(2)            <---------ANAC58     --------->HSFB2a(2) --GT1 <-----------RAV1(1)<---------STY1(2)<------NtERF2<---------At4g35610       <-----------RAV1(1) ->ANAC46<---------DEAR3(1)             <---------ANAC58--------->At4g35610   --------->ARR11(3)  <--   atcgaatgtctgcggcgtcgggaagacgagctagaagacttggctggcggactttgtgagcttccagaagaaacctcagagctcttgttgctaatctctc  15390900  Previous    Next  AGI:  At4g31810.1    Description:  enoyl-CoA hydratase/isomerase family protein. similar to enoyl-CoA hydratase/isomerase family protein [Arabidopsis thaliana] (TAIR:AT3G60510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44346.1); contains InterPro domain Crotonase, core; (InterPro:IPR001753) Range:  from: 15387126    to: 15390402    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g31820.1    Description:  ENP (ENHANCER OF PINOID); signal transducer. similar to phototropic-responsive NPH3 family protein [Arabidopsis thaliana] (TAIR:AT5G67440.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82247.1); contains InterPro domain NPH3; (InterPro:IPR004249); contains InterPro domain BTB/POZ fold; (InterPro:IPR011333); contains InterPro domain BTB/POZ-like; (InterPro:IPR000210) Range:  from: 15390656    to: 15394436    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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