Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                            <------NtERF2                                                        <---------ANAC58                                                        <---------ANAC58                                                        <---------DEAR3(1)                                                       --------->ATERF1(1)                                                       <------NtERF2                                 ----------->GT1      <---------ATERF1(1)                               --------->ZAT14        <---------RAP2.3(1)                               <---------ZAT14        ------>NtERF2                          <<<<<<<<                               --------->ZAT18       <---------DEAR3(1)                   --------->ANAC58                        --------->ALFIN1             --------->ANAC46                     --------->ANAC58                      <---------TGA1a             ----------->HVH21                       --------->ANAC46                      <---------bZIP60(2)     <---------At4g35610                     --------->ANAC46                      <---------ANAC46        --------->At4g35610                    <---------At4g35610 --->LBD16            <---------O2            <---------ZAT2                     <-----------HVH21 --LBD16            --------->ZAT14        <---------At5g28300         <-------PIF5  <------NtERF2--- --GT1              <---------ZAT14       <-----------GT1------>NtERF2 ------->PIF5  --------->At4g35610   attagagcaatatagattgaagtgaagtgggagtgaagtaaatgttacagcttcgacggcgtctctagcagcaagtgcaactatgtcagcgcaagaaaca  15369300                                                                               <---------DAG2                                                                       --------->LBD16                                                                      <---------LBD16                                                                      <---------HSFB2a(2)                                                                <---------ANAC58           <---------GLK1(2)                                    <---------ANAC58   --------->LBD16                                   ==============================HOX2a_HOX2a   <------NtERF2                                     ------>ZmHOX2a(1)--------->HSFB2a(2)  --------->RAP2.6(2)                            <---------ARR14(2)  <---------LBD16 <---------LBD16                                 --------->GLK1(2) <---------ARR14(2) --------->ATERF1(1)                             --------->ARR14(2)--------->ARR14(2) <<<<<<<<<LFY  <---------HSFB2a(2)      ----------->HVH21      <-------TEIL ------>ZmHOX2a(2) ------>ALFIN1 --------->HSFB2a(2)      <---------YAB1      --------->CCA1(2)  <----------DOF2   gtggccggacataaattctcgatggcattcttggctgtgtctatgactgagaatcctccaagagatgcgtttccgggatcgcttttctctgtgctattcc  15369400                                               ---------->DOF2                                           ------->GAMYB                                          <---------MYB111(2)                                          --------->MYB46(3)                                          <---------MYB55(2)                                          <---------MYB52(2)                                         ------>MYB46(1)                                         ------>MYB83  --------->ANAC58                          <---                                        ----------->RAV1(1)                                 <--------                                       ------->GAMYB   --------->ANAC46               ----------->GT1                                       --------->AtMYB61                              <---------ANAC55(2)                                      --------->MYB46(3)                              --------->ANAC55(2)                                      <---------MYB55(2)                     ------>ZmHOX2a(1)   <---                                      <---------MYB52(2)                    --------->TOE2(3)    <---       --------->ZAT6                --------->ANAC46  --------->ANAC58 <----------DOF2    --------->ICU4   cttgtatcaacactgatgcatcacaacccttgcaagttcaaccaacaaacaaagtttaagccaaattgtttgaactttcctcagtaattcgtaattagtg  15369500                                                         <---------MYB46(3)                                                      <-------GAMYB                                                     <---------MYB46(3)                                                     --------->ATHB12                                                     ------>ZmHOX2a(2)                                                     ====================HOX2a_HOX2a                                                   <---------ARR14(2)                                                   --------->ARR14(2)                                               --------->LBD16                                               <---------LBD16                                              --------->LBD16           <---------ZAT2                                              <---------LBD16           <---------At4g35610                                              <---------ANAC46        <--------P          --------->ANAC46              <---------HSFC1(2)        ===================HOX2a_HOX2a          --------->ANAC58              --------->HSFC1(2)        <------ZmHOX2a(1)    <---------ANAC46                    <---------HSFB2a(1)<---------ARR14(2)        --------->ALFIN1    ----------->RAV1(2)                 --------->HSFB2a(1)--------->ARR14(2)   --------->MYB52(1) ------ANAC58                         ======================HOX2a_HOX2a --------->At4g35610 -ICU4    --------->ANAC58            ==============================HOX2a_HOX2a----------->HVH21 ------ANAC46               ---------->DOF2  <---------LBD16 ------>ZmHOX2a(2)------>ZmHOX2a(2) ------ANAC58      <---------ANAC46   <------ZmHOX2a(1) <---------TOE1(2)   <-----------ARR10     <--   cgtgttacctggacgaaacagtcgtggaagaaaagacgaaggagtttcccggggatcgttggatcggaggaggtagctgatctaacggtgtttctgacta  15369600                                                  <------NtERF2                                                <---------DEAR3(1)                                                <---------ANAC46                                               <---------LBD16                                               <------NtERF2                                              <------MYB46(1)                                              <------MYB83                                             --------->MYB111(2)                                             <---------DEAR3(1)                                            --------->ALFIN1                                            <--------P                                  ---------->DOF2--------->LBD16                                 --------->AHL20(2)                                 <---------AHL20(2)  <------ZmHOX2a(1)      --------->YAB1      -----                  <---------ARR11(3)      <---------MYB46(3)<---------At4g35610     --------->At4g35610 -------GLK1(2)   --------->ARR11(3)     <---------AtMYB61  --------->At4g35610   <------ZmHOX2a(1)   gaaactcggctacagaacaagaactagcatagaaattaaaggagaggttggcggaggaagtgagaagactagacagaaacataaggagatgaagaagagt  15369700                             <---------YAB1                             <---------AHL20(2)                            --------->AHL20(2)                          --------->ICU4                      ------>NtERF2                     --------->ANAC58                     --------->ANAC46                              XXXXXXXXXXXXXXXXXXXX>MIR854A-E                     --------->ANAC58                              --------->YAB1                     --------->RAP2.6(2)                      ------------>CBF                     <-           <---------HSFB2a(2) <------------CBF           ----------->GT1                          <-  ----------->GT1   --------->SPL7                       --------->DAG2                     --------- ---->ALFIN1       <------ZmHOX2a(1)                    ---------->DOF2    ---------->DOF2<------ZmHOX2a(1)   ggaacagtttattctgtaagaggacgccatttttattgtctctgtgttttgactcgaataaagtgacaatgaaaatagaaaggagaatgagaggaatctt  15369800      ----------->GT1                                                                           -----    <-------GAMYB                 <---------ICU4                                              <------   <---------MYB46(3)             --------->ATHB51                                           <-------   --------->MYB111(2)   <---------ZAT14              <-----------HVH21                      <------- --------TOE1(3)         --------->ZAT14             <---------ZAT6          <---------At4g35610----- --------TOE2(3)         <---------ZAT18           --------->MYB52(2)       <---------TOE2(3)<------- >GLK1(2)           <---------At4g35610       <---------TOE2(3)----------->GT1 --------->ALFIN1 -----   gaaggttgttgtaataaactgcaactgttcacttcataatttgcatttgatgttagtgtcagagatagaaaattagttgaggtgatgaagttgagtcaac  15369900                       <---------ANAC58     <---------ATHB12  <---------ANAC58 ------------>CBF  <---------AtMYB61 ---->ANAC46     --------->YAB1 ---DOF5.7(2) <------------CBF --WRKY12    -------->ATHB1 --WRKY45  --------->GLK1(2)                                                <---------ETT(1) ---->ANAC58 --------->ATHB12                                               --------->ANAC46 --WRKY38(1) <---------ICU4               --------->HSFB2a(1)            --------->ARR14(2)         < ---->ANAC58<---------YAB1              ----------->RAV1(1)              <---------ARR14(2)       <--   gcattcaatgaagaatcattgatggtcgtgtttagttgaatccaacattcccagcatcatccatggttttaagtgaatccgacatacttatctatgggtt  15370000         <-----------ARR10         <-----------GT1      ----------->GT1    <---------ANAC46   <------NtERF2  <---------RAP2.3(1)       --------->ANAC58                                                     <--- <---------RAP2.3(3)        --------->ANAC46                                                     <--- <---------DEAR3(1)         --------->ANAC58                                                <-------- --------->ETT(1) --------->ANAC58                                                        <---------ARR11(3) <---------DREB2C(2)      <---------ANAC58         --------->DAG2                         --------->ARR11(3) <---------At1g77200      <---------ANAC58       ---------->DOF2                          <---------- <---------DEAR4(1) ------------>CBF      --------->HSFB2a(2)    <---------ANAC58      --------->YAB1 ---------ORA47(1)--------->ANAC58        <---------HSFB2a(2)    <---------ANAC58      --------->AHL20(2) ---------RAV1(1) --------->ANAC46  --------->ARR11(3)        <----------DOF2       --------->TOE2(3)   ttgtcggcgagtaacttcccaagccaatgcatgccagagaacttgtggaagaaaaggtgatcaactttcttgaatactggatgaaacattaatatctaac  15370100                      <---------YAB1                    <-----------GT1<----------DOF2                  --------->AHL20(2)                  <---------AHL20(2) -------DOF2 <---------ARR11(3)    --------->TOE2(3) ------DAG2--------->ANAC58   <---------DAG2                                               <<<<<<<<<MYB2 -MYB59    --------->ANAC58   <----------DOF2                <---------YAB1     --------->ANAC58 -ARR10    --------->ANAC46<-----------GT1                 <---------At4g35610  --------->ANAC58   tttttatttctccaagacatttttatgattcacttttctttaatatcacaaataaaacttatgctgattctaaaaaatgaacaagaaaacttggttttct  15370200  Previous    Next  AGI:  At4g31760.1    Description:  peroxidase, putative. Identical to Peroxidase 46 precursor (PER46) [Arabidopsis Thaliana] (GB:O81772); similar to peroxidase, putative [Arabidopsis thaliana] (TAIR:AT2G24800.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44380.1); contains InterPro domain Plant peroxidase; (InterPro:IPR000823); contains InterPro domain Haem peroxidase; (InterPro:IPR010255); contains InterPro domain Haem peroxidase, plant/fungal/bacterial; (InterPro:IPR002016) Range:  from: 15368266    to: 15369730    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g31770.1    Description:  calcineurin-like phosphoesterase family protein. Identical to Lariat debranching enzyme (DBR1) [Arabidopsis Thaliana] (GB:Q94K01;GB:O81771); similar to unnamed protein product [Vitis vinifera] (GB:CAO61546.1); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843); contains InterPro domain Lariat debranching enzyme, C-terminal; (InterPro:IPR007708) Range:  from: 15370072    to: 15372602    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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