Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      ----------->HVH21                                               --------->HSFB2a(2)                  <-----------GT1         ---------->ID1                 --------->AHL20(2)  <---------ARR14(2)                               --------->ATHB12          --------->At4g35610        --------->ARR14(2)               <---------MYB52(2)          <---------ZAT2             <---------GLK1(2)    --------->ATHB51 ------->GAMYB           ==          --------->ZAT2           --------->LBD16 --------->SPL7    --------->ANAC46------>ZmHOX2a(1)          <---------At4g35610     --------->HSFB2a(2)    --------->ICU4   <---------MYB52(2)       --    <----------DOF2               <---------HSFB2a(2)    <---------YAB1 --------->MYB52(1)  <--------   ctgaaactttccagctcaatttactaattctctgttccagatttgtcttctcgtatgacattattgtttctaagtaacgaactattcctgatttgtgttg  15356000                                                                                                -----                                  ----------->GT1                                              ------       --------->ANAC46      --------->O2                                                      ------     <---------ALFIN1        <---------TGA1a                  --------->ANAC58                 ------     --------->AtMYB61       <---------ANAC46                 --------->ANAC58                 ------ ======================================bZIP_DOF         <-------TEIL                           ------ -------->DOF2               --------->TGA1a        <---------YAB1        --------->YAB1     -------- ---RAV1(1)                  <---------O2       --------->ZAT18          <-------TEIL <--------------   caaaagaccacaccaagttttgaattgaacgacgtgaagtaaactaagagggctctgattcatcaagaaacagcattcatgagcaaaattcgataccacc  15356100 ---->MYB46(3) --->ANAC58 >MYB46(1)                                                                                        --- >MYB83                                                                 ---------->DOF2      -------- --->ANAC46          <----------ID1                                --------->AHL20(2)        <------- --->ANAC58        ---------->DOF2                          <------ZmHOX2a(1)                -------- ->AtMYB61   ------->GAMYB       <---------At4g35610       ----------->GT1          ---------->DOF2 -------WRI1 ----------->GT1     --------->At4g35610      ----------->GT1--------->DAG2    ------->TEIL   caagagaaaattcaaccgaaaaaaagacaaaattgagctgaaattgaaaccagagacatagaggaaaaattcaataaagtaagcgataatgcgaacctaa  15356200                                                                              <------NtERF2                                                                            <---------ANAC58                                                                        <---------ANAC58                                                                        <---------ANAC58                                                                        <---------ANAC46                       --------->At4g35610                              <---------LBD16         --------->ANAC58                                            --------->GLK1(1)             <-       ----------->RAV1(1)    --------->O2                           <---------GLK1(1)     <---------ARR14(2)       --------->MYB52(1)     <---------O2                --------->HSFB2a(1)<---------MYB46(3)   <--     --------->At4g35610      <---------TGA1a             <---------HSFC1(2)<---------ANAC46      ---  --------->At4g35610  <---------ZAT2       --------->YAB1<---------HSFB2a(1)--------->MYB55(2)  ---- ------>ANAC46         <---------At4g35610  ----------->GT1         --------->ARR14(2)     --------->ARR14(2) ->TOE1(3)------->GAMYB--------->ZAT2  <---------ATHB12   --------->HSFC1(2)<---------ANAC58 ------>ZmHOX2a(2) --MYB59 --------->ANAC58     ============================bZIP_DOF  <---------ARR14(2)    =========== ->TOE2(3)==============================MYC_MYB---------->DOF2  <---------LBD16 <--------P<------ZmHOX2a(1)   acgaagcagcaacggaagagaattgagctgagacgaggcaaatcaatggtaaagaagagaagtttcgacggatttcgggcgggtagaagaaaggatcgga  15356300                                                                       <---------RVE1(1)                                                                      --------->ARR11(3)                                                                      <---------GLK1(2)                                                                    ----------->ARR10                                                                 <-----------HVH21                                   ------>NtERF2                <---------DEAR3(2)                                  ----------->HVH21            --------->DEAR3(1)           XXXXXXXXXXXXXXXXXXXXX>MIR771                      ------>NtERF2                     <----- -----ZmHOX2a(2)                ------>ZmHOX2a(1)            --------->LBD16                  ------- -------ARR14(2)               --------->TOE1(2)            --------->ANAC46                 -------- ------>ARR14(2)        --------->TOE1(3)                   --------->DEAR3(1)             --------->GLK1(2) ----->GLK1(1)  <-------GAMYB  --------->TOE2(2)           <---------LBD16                <---------GLK1(2) =====HOX2a_HOX2a       --------->TOE2(3)           *TSS --------->ARR14(2)           ---------->DOF2   gatcgactagtgagtctccgttgaaaccctaatcctccgactggtccaactcagagccatctccgccggtcagatttttaagagttgagaaagaatcgtt  15356400                                                                                         <----------DOF2                                                                                      <-----------GT1                                                                                      ---------->ID1      --------->MYB52(1)                                                             <-----------GT1 ----MYB52(1)         <---------AHL20(2)    <------ZmHOX2a(1)            <---------TOE2(3) -->TOE2(3)       --------->ATHB12        <---------TOE1(3)              --------->MYB59 <---------DAG2 --->GT1       <------------CBF           <---------TOE2(3)              <---------TOE1(3)    <------   agatagactaatgggcctattgatttaaactatggcccaaacttaaggaagtattcttcacatatggcccaaatttaggtttttttttttcctttttcac  15356500                                                                                     --------->TOE2(3)                                                   <---------TOE2(3)               <---------ARR11(3)                                              ------->TEIL                         --------->ARR11(3)                                             <---------CCA1(2)             <---------ATHB12     -----                                       --------->ZAT14                   --------->WOX13(1)  --------       <---------AHL20(2)              <---------ZAT14         --------->ANAC58 --------->AHL20(2) <- -----GT1             --------->AHL20(2) <---------ANAC46      --------->ANAC58 <---------AHL20(2) --   aatccattttttattctcttcccataaaatcaatatttgagtttagtgtatctaagaatatcgaaacgaaattgtcaatcaataaaatctcaaaaatgta  15356600                                        <---------AHL20(2)                                      <----------DOF2                                  <---------ZAT18                                  --------->ZAT18       <---------ZAT14       <---------ZAT14       --------->ZAT14       --------->ZAT14                                                      ---  <---------ANAC46        <----------DOF2                                 --------->ANAC58   -------- -->TEIL     <---------------AtSPL8 --------->At4g35610                   --------->ANAC58   -------- --->GT1   <---------ZAT6 <---------ANAC46                   --------->GLK1(2)               -------- ---------DOF2          <---------At4g35610             ---------->DOF2 ---------->DOF2  --------->HSFB2a(2) ------->TOE2(3)        --------->At4g35610         <----------ARF1    --------->YAB1    <---------HSFB2a(2)   actttagtgtatagtgttgtacaatctgctgtatagtgagctttaatttgatgggagacaaagaatatgacaatgaaagcactaactccatctagacgga  15356700              ---------->DOF2  <---------AHL20(2)                                                                             <--- --------->AHL20(2)                                                               --------->ARR11(3)- ------>ICU4--------->MYB46(3)                      <---------ICU4       <--------P          -------- ->ANAC58  ------>MYB83                             --------->ATHB12 <---------TOE1(3)     <---------HSFB2a(2) ->ANAC58  ------>MYB46(1)                 <---------At4g35610      --------->MYB52(1)     --------->HSFB2a(2) ->ANAC46 ----------->RAV1(1)          <-----------HVH21    ---------->DOF2       <---------AHL20(1)<   atatttaatgaccaacaaaagcagtttttgtttttctcatttgtcaactcatagtcattagaaaaagacttaagggtagttttatatattctacgagaag  15356800                                                                                          --------->GLK1(1)   --------->At5g28300                                                  --------->YAB1 --------->LBD16  ----------->GT1                                                      <---------YAB1 --------->ANAC55(2) --------->ALFIN1                                                ------->TEIL         --------->ANAC46 --------RAV1(2)     --------->ATHB12                       --------->CCA1(2)        <---------LBD16 ------>PIF5         <------ZmHOX2a(1)                     <---------ARR11(3)<---------DAG2 -->DOF2      <---------ZAT14                              --------->ARR11(3)<----------DOF2    <---- -------PIF5  --------->ZAT14                      ---------->DOF2   --------->YAB1 <-----------GT1   caggtggtaaattcagtgaagaaggattggactaattctctccataaaaacataaaagagagatatgtatatgatgatactttatttcacgggattccat  15356900  Previous    Next  AGI:  At4g31720.1    Description:  TAFII15 (SALT TOLERANCE DURING GERMINATION 1); transcription factor. similar to unnamed protein product [Vitis vinifera] (GB:CAO44668.1); contains InterPro domain Transcription initiation factor TFIID, 23-30 kDa subunit; (InterPro:IPR003923) Range:  from: 15353958    to: 15356352    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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