Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          <---------TGA1a                                                                                        --------->ANAC58                                                                                        <---------O2                                                                                        --------->TGA1a                                                                                        --------->ANAC58                                                                                    --------->ANAC58                                                                                ---------->DOF2                                                                                ==================bZIP_DOF                                                                             ----------->GT1        ---------->DOF2                            <---------At4g35610       <---------ANAC46      <------ZmHOX2a(2)                 ---------->DOF2             --------->GLK1(2)   --------->O2 ------->YAB1                  ------->TEIL        --------->At4g35610      ---------->ID1        --- ------->ATHB12          --------->GLK1(2)    --------->At4g35610  <---------GLK1(2)--------->ANAC58 --->ZAT6               <---------GLK1(2)     --------->GLK1(1)    --------->ARR14(2)  ------->TEIL   ctcattagatcaaagtaagaaaaatggaatctgtacctcgcccaaagcatctccactgacttcttgagagattctcttgtcgtaaaacgcacgtctgcat  15347300                                                           <---------AHL20(2)                                                --------->ANAC58                                                <---------ANAC55(2)                                              --------->CCA1(2)                              --------->CCA1(2) --------->ANAC46                                 <---                    <---------AHL20(1)        --------->ARR14(1)                        --------->GLK1(2)                    --------->AHL20(1)       --------->ARR11(1)                        <---------ARR14(2)                    --------->AHL20(2)       <---------ARR14(2)                        <---------ARR11(3)                 --------->AHL20(2)          --------->ARR14(2)                        <---------GLK1(2)          <---------At4g35610<---------ARR11(3) --------->ANAC55(2)                    --------->ARR14(2)          --------->At4g35610<---------ARR14(2) --------->ANAC58                      <---------HSFB2a(1)      <---------ATHB12       --------->ARR14(2)<-------TEIL--------->AHL20(2)         <---------HSFC1(2)    --------->WOX13(1)     --------->LBD16 ----------->ARR10                          --------->HSFC1(2) --------->TOE2(3)  <---------AHL20(2)   --------->At4g35610        --------->ICU4    --------->HSFB2a(1) -------->RAV1(1)--------->YAB1          <---------At4g35610  <---------TOE2(3)      ----------->ARR10   caacataaatcaagctgaataatataatccagatatgtttatgagcagatacgaaacttattttaatgtaagtattaaacatagaagaagattctaactc  15347400                                                                                              ------>ZmHOX2a(2)                                                                                             --------                                                                                             <------ZmHOX2a(2)                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                      <---------ATHB12                      <--------                                                     ------>MYB46(1)                  --------->YAB1    <---------At4g35610                              ------>MYB83                    <---------ATHB12   <---------TOE2(3)                       <-----------GT1     --------->ZAT6       ------>MYB46(1)   <---------TOE1(3) ----------->GT1      --------->ZAT14    <-----------GT1        ------>MYB83 ------YAB1      ------->TEIL        <---------At5g28300   --------->AHL20(2)      --------->WOX13(1)   ttattaagcttataagacgaacatagaaaaattgacaattactgtttactagacctatcaatttaacagtgatatatacaaacaccaatcaatagatctg  15347500        --------->ANAC58    ------>MYB46(1)    ------>MYB83     <---------AHL20(2) ->CCA1(2)          --------->AHL20(2) >AGP1  --------->ANAC46                             --------->ARR11(3)       <---------ARR14(2) -ARR11(3)    <---------ARR11(3)                     <---------ARR11(3)       --------->ARR11(3) >ARR11(3)    --------->ARR11(3)                     --------->GLK1(2)<---------WRKY38(1) >ARR14(2)   --------->CCA1(1)                 --------->ANAC58       <---------WRKY12       -------- -ARR14(2)   --------->RVE1(1)                 --------->ANAC58--------->GLK1(2)           <xxxxxxxxx -AGP1  --------->ANAC58                     ---------->DOF2  <---------GLK1(2) ------>ZmHOX2a(2)   gcaacctagcacgaaatatctattaaaaatgaatgaagatgaaacagagaagcaaaatcttacagtttctggtcatcgtcgatctcgagcttcttctggc  15347600                   --------->TOE2(3)             --------->ANAC58          <---------GLK1(2)          <---------ARR14(2)          --------->ARR14(2)    --------->MYB55(2)    <---------MYB46(3)                                 ---------->DOF2   --------->ANAC58  <---------MYB52(1) --------->WRKY12          <---------TOE2(3)         --------->ANAC58 ->HSFB2a(2) --------->ANAC58                  --------->DAG2       <---------ARR14(2) xxxxxxxxxxsmallRNA(se3)                     ---------->DOF2        --------->ARR14(2)   atccagtagttggattcgcaacgttgaactgaaacgaagaaacatgaaaaaggttagcaaaggaaactcgaatacgagcaaatgtagagtctattcgatt  15347700                                                                                           --------->AHL20(2)                                                                                   <------MYB83                                                                                   <------MYB46(1)                                                                                   <---------ANAC46              --------->REM1(1)                                                   --------->MYB111(1)         ------->TEIL                                                             --------->MYB52(2)        <---------ALFIN1                                                          --------->MYB55(2)      --------->ANAC46                                                            <---------AtMYB61      <---------ANAC55(2)                                                         <---------MYB46(3)      --------->ANAC55(2)                                                         --------->MYB111(2)      --------->ANAC58                                                            --------->MYB46(2)      --------->ANAC58                                                           <---------MYB55(1)   <---------MYB52(1)                                                           <---------MYB52(1)   <------NtERF2                                                             <-------TEIL<-----------TBP   ----------->HVH21                                                        --------->ARR14(1)  <-----------HVH21                                                        <---------GLK1(2)  <-----------TGA1                                                         --------->ARR14(2)  <---------RAP2.6(3)                                                      <---------ARR14(2)  ------>NtERF2                                                            --------->ARR11(1) --------->DEAR3(1)                            --------->ANAC58           <---------HSFB2a(1) --------->RAP2.6(2)             *TSS          --------->ANAC58           <---------HSFC1(2) --------->RAP2.3(3)            <---------GLK1(1)        <-----------TBP  --------->HSFC1(2) --------->ANAC46      <---------O2        --------->ANAC58               --------->HSFB2a(1) <---------ATERF1(2)   --------->O2        --------->ANAC58              ----------->ARR10 <---------AHL20(2)   tcgccgtcacgcaccttcatcttcgacgtctagggtttctctgtaacgcaagacagcatatttataccaagagagaagattcgtttggtggatttatatg  15347800                                                                             ----------->GT1                                                                   --------->AHL20(2)                  --------->TCP20                                  <---------ICU4                  <---------PCF2            <<<<<<<<<TBF1          --------->ATHB51                  --------->PCF5   <---------YAB1                 --------->ICU4                  --------->TCP15(1)--------->YAB1              --------->YAB1            <---------ATHB51      <-----------GT1      <-------TEIL<--------ATHB1            --------->ICU4       --------->YAB1   ------>ZmHOX2a(1)<---------AHL20(2)  <---------MYB52(1)          <----------DOF2    --------->TOE2(3)<---------YAB1                 <---   ggccgttttctgcgattatgggcccgatggcccttttatcattttcttcttcctaaattcatgaaataataatttcaaacagaaaaaacatagcattagt  15347900                                                <---------ANAC58                                                <---------ANAC46                                   --------->AHL20(2)                                   <---------AHL20(2)                        <---------AHL20(2)                                 <---------AHL20(2)                          --------->AHL20(2)                                 --------->AHL20(2)                        --------->AHL20(2)                               --------->AHL20(2)                          <---------AHL20(2)                             --------->AHL20(2) <---------ANAC55(2)      --------->AHL20(2)                             <---------AHL20(2) <---------ANAC58        --------->AHL20(1)                           --------->AHL20(2)   <---------ANAC55(1)     <---------AHL20(1)                           <---------AHL20(2)   --------->ANAC55(2)    --------->AHL20(2)                         <---------AHL20(2)   ------>MYB83           --------->AHL20(2)                         --------->AHL20(2)   ------>MYB46(1)    --------->AHL20(2)            ------                       --------->AHL20(2)<-----------GT1    --------->AHL20(2)        <---------DAG2 ------AHL20(2)   <-------TEIL <---------AHL20(2)--------->LBD16--------->AHL20(2) <-----------GT1   ttattttgaagaaaatttgatacatatatatatatatatatataaaccttccgtgttcaaaaaaaaataaaaaatatatatatataaaccttttctcctc  15348000                                                                                             --------                                                                                    --------->KAN4(2)                       <----------DOF2                    <---------ZAT6           <---------KAN4(1)                      --------------->AGL15             <---------ANAC58          <---------YAB1                      <---------DAG2                    <---------ANAC46        --------->YAB1                    ---------->ID1                     <-------TEIL             <---------ICU4                   <---------WRKY18(1)             --------->DAG2               --------->ATHB12                   <-----------GT1                ---------->DOF2               <--------ATHB1                  ----------->HVH21           --------->AHL20(2)               <---------YAB1--------      ----------->GT1<-----------------AGL1--------->ATHB12                    --------->ICU4-------- >ZmHOX2a(1)  <---------YAB1              --------->ICU4<---------ANAC58       <---------ATHB12  ----   aaaataatgtgtaattttgtttgacctttttttgcaacttggccttgattaaaaaagttcgtgttaaacaaatttctgccaatgattattctcttaagca  15348100                       <---------AHL20(2)                   <---------MYB52(1)            <---------At4g35610              --------->ARR14(2)                 --------->At4g35610              <---------GLK1(2)                 <---------ARR11(3)              <---------ARR14(2)         <---------SPL7           --------->ANAC58          --------->LBD16           --------->ANAC55(2)      <---------LBD16           --------->ANAC58         --------->HSFB2a(2)           --------->ANAC46         <---------HSFB2a(2)      --------->WOX13(1)    <-----------GT1     --------->ARR14(2) ->ANAC46  --------->ANAC55(1)     <---------LBD16 ->ANAC58  <---------ANAC55(2) <----------DOF2 --------->GLK1(1)     <-----------RAV1(1) ->ANAC58 <---------LBD16   <---------AHL20(2) <---------GLK1(1) <----------DOF2                 ---- ---->P <---------ATHB12<---------AHL20(2) --------->SPL7    <----------DOF2 <-----------GT1------>ZmHOX2a(1)   acctgtttcaatcacggaatcgttttttattttcttttccgggagtacgatatctgactaattctttctttttgttgtttgactatctctcttccttaca  15348200  Previous    Next  AGI:  At4g31700.1    Description:  RPS6 (RIBOSOMAL PROTEIN S6); structural constituent of ribosome. Identical to 40S ribosomal protein S6-1 (RPS6A) [Arabidopsis Thaliana] (GB:O48549;GB:O81777); similar to EMB3010 (EMBRYO DEFECTIVE 3010), structural constituent of ribosome [Arabidopsis thaliana] (TAIR:AT5G10360.1); similar to 117M18_18 [Brassica rapa] (GB:AAZ66937.1); similar to ribosomal protein S6-like protein [Solanum tuberosum] (GB:ABA40470.1); contains InterPro domain Ribosomal protein S6, eukaryotic; (InterPro:IPR014401); contains InterPro domain Ribosomal protein S6e; (InterPro:IPR001377) Range:  from: 15346078    to: 15347733    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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