Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         ----------->HVH21                                                                      ------>ZmHOX2a(2)     <---------YAB1                                                  <---------GLK1(1)     --------->ICU4                                                 <---------AGP1                 <-   --------->YAB1                                                   --------->ARR11(3)             <-  --------->ICU4                                                   <---------CCA1(2)            ----- <---------WOX13(1)                                        <---------MYB46(3)                 ------- --->ATHB12             <---------ALFIN1                  <---------ANAC46        --------->MYB59 <-- -TEIL   <-------TEIL<-----------GT1             --------->At4g35610<---------ARR11(3)   ---------->DOF2   ttgaatgatgattcataccattttcaccactctcttcgccttcttcatgtctgctagactgtgggtattggatctcacagcaactaggtcccaaagcagt  15344800                                                                                         <---------MYB52(1)                                                                                        --------->LBD16                                                                                       <---------ANAC58                                                                                       <---------ANAC55(1)                                                                                       <---------ANAC55(2)                                                                                       --------->ANAC55(2)                                                                                     ------>MYB46(1)                                                                                     ------>MYB83                                                                                   --------->AtMYB61                                                                     ------->GAMYB--------->HSFC1(2)                                                             ------->TEIL         <---------HSFC1(2) --------->ANAC58                                          ------->MYC3           --------->HSFB2a(1) --------->ANAC58                                      <------ZmHOX2a(2)          <---------HSFB2a(1) --------ANAC46                                       <---------ARR11(3)         -------->P --------bZIP60(2)                     <-----------HVH21   <-------MYC3          ------>MYB46(1) ------>HVH21              ---------->DOF2    --------->ARR14(2)    --------->MYB46(3) <---------ANAC58 ---->GT1         ------>ZmHOX2a(1) ---------->DOF2   --------->ARR11(3)         ------>MYB83    ---- ---------------------TaNAC69(2)<----------ID1<---------ARR14(2)    <---------MYB52(2) <---------ANAC46   gacatggaacaccatgtctccttcatgtctaaagacaacaaagtcaccgattcgaagatcatgtgcctcaacgaactctttccaaccttccgtgagtcta  15344900                                   ------->TEIL                                --------->ANAC58                                --------->ANAC58                                --------->ANAC46                <---------ANAC58                              ------>NtERF2                     <---------ANAC58                   <---------TOE1(2)<---------At4g35610     <---------ANAC58           <-----------GT1   ----------->HVH21              <---------ANAC58                     ----         <----------DOF2     --------->DEAR3(1)         <---------ANAC58                         ----        <---------ICU4       --------->ANAC46           <---------ANAC58   <---------------------WRI1 ------->HVH21    --------------------->WRI1   --------->ANAC46 <---------ANAC46                 <---   tgaccctccatctttacttcccatgttctctccgacgcatctgttctcaacgttacagtcttgccttcgtgttttccctcgatgtgctcagagaagtagt  15345000                                                                                                -----           --------->HSFB2a(2)                                                            <--------P      --------->HSFB2a(1)                                                            <---------TOE1(1)      <---------HSFC1(2)                                                             <---------TOE2(1)      --------->HSFC1(2)                                                          <---------SPL7<----      <---------HSFB2a(1)          <---------YAB1                                <---------ANAC58     <---------KAN4(2)           <---------ICU4                                  <---------ANAC46   <------ZmHOX2a(1)            --------->ICU4                                   <---------ANAC55(2) ----->ZAT14                 --------->MYB46(3)                                  <---------ANAC58   - ----->ZAT18     ------->GAMYB--------->YAB1                                --------->ATHB12   <----- ------ZAT14  ----------->RAV1(1)--------->YAB1                      ---------->DOF2--------->SPL7  <   tcacaggaattttctgcaacagagaaacagaaccatcatgagactatatgttatgttcagacagattgagagaaagaaagattgcgtacgaggttgctct  15345100                                        <----------ARF1                                  --------->MYB52(2)                                <--------P    <---------HSFB2a(2)         <---------MYB52(1)    --------->LBD16            <-------GAMYB    --------->HSFB2a(2)       <------MYB46(1)   <---------LBD16            <---------MYB46(3)  <---------LBD16             <------MYB83 ---->HSFB2a(2)               --------->MYB55(2)                     <------ZmHOX2a(2) -----HSFB2a(2)              <---------AtMYB61            --------->ANAC58 -------->ARR14(2)          <--------P <------NtERF2      --------->ANAC46 ----LBD16                --------->ALFIN1                --------->ANAC58     ---------->DOF2------- ---------ARR14(2)        <-----------RAV1(1)    --------->ALFIN1    <---------ATHB12 ---------->DOF2   ggaatccgggaagaagaggctggaagaagtgttggttagtcggagacaagggtgatgcattcgccattccgatcactctaacaaagccaaaagcccaaaa  15345200                                      <---------ANAC58            ------------>CBF                                      <---------ANAC58   --------->ANAC46                                    --------->GLK1(2)    --------->ANAC58                                   <---------GLK1(2)     --------->ANAC58                     --------->AHL20(1)                 ------->TEIL                              <--                     <---------AHL20(1)             <---------------AtSPL3                    -------                     --------->AHL20(2)             --------------->AtSPL8                   --------                     <---------AHL20(2)          --------->AHL20(2)    --------->AHL20(2)    --------               ----------->GT1     <---------ARR14(2)   --------->SPL7 <---------AHL20(2)   <--------      --------->At5g28300   ---------->DOF2--------->ETT(2)      <-----------GT1    ---------->DOF2 --->DOF2     <---------TOE2(3)  ----------->ARR10  <---------------AtSPL8   <------------CBF<-------   gttttctcggtgacttaatgtaataaaatacaaaggagattcttgtctacattatatgtacgccatttcacaataaatgaattgacaaaagacaaaatct  15345300        --------->YAB1     --------->AHL20(2) --------DOF2              --------->YAB1     ----------->GT1 -->RVE1(1)             --------->YAB1    <---------AHL20(2) ->ARR11(3)        <---------TOE2(3)      --------->AHL20(2)                                  <------ ->GLK1(2)    --------->AHL20(2)      ----------->TBP            ----------->HVH21      ---------->DOF2 -GLK1(2)     <---------AHL20(2)     --------->AHL20(2)        --------->ANAC55(2)  --------->ZAT6 --ARR11(3)<---------GLK1(2)    ------------>CBF  ------------>CBF               ----------->HVH21   ctttcaaatatcagaattttttagattaataaaaaacaatataaaaaaatgtgacaataccattcacttgacaacaccattcactgacactaaagacttt  15345400                                                                                <----------DOF2                    <-------TEIL                          ---------->DOF2   <---------GLK1(1)       <------ZmHOX2a(1)                        --------->TOE2(3)           --------->GLK1(1)      --     <---------TOE2(3)    <---------YAB1      <---------ARR11(3)           <---------ARR11(3)    <--- ----DOF2       <---------------AtSPL8        --------->ARR11(3)     --------->MYB52(1)          ----   tgaagtttaggaatagagggagtacattttgatagaaaacaaaactaaaatctaaatcacaaaagatagcctaacgagatttcttttttttttttttgtg  15345500                                                                                        <----------DOF2           <---------ANAC58                                                            <---------ANAC58           <---------ANAC46                                                            <---------ANAC58           <---------ANAC58                                                        <---------WOX13(1)   <---------CCA1(2)                                                       <----------DOF2 ---->ZmHOX2a(2)                            <---------MYB46(3)            <---------ANAC58  --------- ------ARR11(3)                          <----------DOF2       <---------ANAC46 <---------YAB1      < ----->ARR11(3)---------->ID1       <---------At4g35610  <---------YAB1   <---------ANAC58  <--------   atcttgtatattggcttgttgtttaagcctgtaagtttggctgctttggttagagcatcatggttgtgtttttgatgcttttgtaattggctttctgaaa  15345600                                                                            --------->O2                                                                            <---------ANAC55(2)                                                                     ----------->GT1                                                                     <----------ID1                                                                   --------->DAG2     <---------TOE2(3)                          ---------->DOF2                         ---------->DOF2     <---------TOE1(3)          --------->CCA1(2)                                       ====================bZIP_DOF         <---------ARR11(3) ----------->GT1                  ----------->GT1<---------O2 <--------P >HSFB2a(2)           --------->ETT(2)                      --------->ANAC58======================MYC_MYB ----------DOF2       <---------ETT(2)                      --------->ANAC58<---------TGA1a -HSFB2a(2)    --------->YAB1        --------->MYB52(1)----------->HVH21    --------->TGA1a--------->MYB52(2)   ctctttatctagatatatcatcagtcgacaaagaaaaaaaaacgattcagtttcagtgtgacaaggaaaaaaggagaaacgtgagtttaaggttagtttg  15345700  Previous    Next  AGI:  At4g31690.1    Description:  transcriptional factor B3 family protein. similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT4G31680.1); similar to reproductive meristem gene 1 [Brassica oleracea var. botrytis] (GB:AAC18082.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 15343333    to: 15345167    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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