Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        <---------DEAR3(2)                                                                                      <---------MYB46(3)                                                                                      <------MYB46(1)                                                                                      <------MYB83                                                                                     <---------MYB46(3)                                                                                     <---------AtMYB61                                                                                    <--------P                                                                                    <---------MYB55(1)                                                                                    <---------MYB52(1)                                                                       <------------AtMYB77                                                                  --------------->AGL15       <---------At4g35610                                        <---------------AGL15       --------->At4g35610                                        ===================================   <---------ARR11(3)                                            <-----------------AGL1          ----   --------->ARR11(3)                      <---------YAB1        <-----------------AGL2        <----- ------->GT1                    <----------DOF2                <-----------GT1     <---------MYB52(1) ->ZAT14                      <---------HSFC1(2)        --------->ANAC58           <-------GAMYB<---- --ZAT14                      --------->HSFC1(2)        --------->ANAC58          <---------MYB46(3)   tgtaatatcatctgcgtaagttagagcttagaagctttctgcataacaattgatcaaaacgctaattactctaactggccatttcggttggttcttgatt  15333600                                                                                             --------                                                                                            <--------                                                                                          --------->ANAC58                                                                                          --------->ANAC58                                                                               <---------ZAT2--------                                                   --------------->AGL15       <---------At4g35610                                                   <---------------AGL15       --------->At4g35610 <---------YAB1           <-----------GT1          ================================================== ==================================================================MADS_MADS ======================== ----->KAN4(2)        <---------YAB1              --------->ZAT6             <-----------RAV1(2) ----YAB1           --------->YAB1          --------->MYB52(1)           ------>NtERF2    --------->ANAC46 -----KAN4(1)      <---------YAB1         <---------MYB52(2)      --------->ZAT14       ---------->DOF2   attctgatgcacaaacctgttatgatgtttacatttctcttaaaactaacttacactatatagataactatactctgcctcagctaatgcaaaagccaca  15333700                                                                               --------------->AGL15                                                                               <----------DOF2                                                                               <---------------AGL15                   ----------->GT1                                            <-----------------AGL2            ===================================================================================MADS_MADS         <---------ARR11(3)                                                   <-----------------AGL3         --------->ARR11(3)                         <---------ATHB12          <-----------------AG --->RAV1(1)--------------->AGL15                 ------>MYB46(1)            <---------ATHB12 --ID1--------->AHL20(2)        ---------->DOF2   ------>MYB83              ------>MYB46(1) ->RAP2.6(2)<---------------AGL15--------->DAG2 <---------MYB111(1)         ------>MYB83         <--- ===========================MADS_MADS           --------->AtMYB61     --------->At4g35610     ------- ====RAV<---------CCA1(2) ---------->DOF2     ------>NtERF2     <---------ARR11(3)         --------->ICU4   aaactagattatatctccaaatagaaaataaagaaaaaggagcaatgccaccaaatcagtaaacgagatgttagcaccaatctttttttggtaatgaatt  15333800                                                                             <---------ZAT2                                                                             --------->ZAT2                                                                             --------->At4g35610                                                                             <---------At4g35610                                                 ---------->DOF2            --------->MYB111(1)                                       ---------->DOF2                     <--------P                  --------->DAG2     --------->YAB1              <---------TOE2(3) --------->At4g35610           <----------ID1          <---------TOE2(3)            --------->YAB1     <---------At4g35610   --------->REM1(1)             --------->AHL20(2)           <---------YAB1--------->MYB111(2) --------GT1     ---------->DOF2 <---------AHL20(2)          --------->TOE2(3)     <---------GLK1(1)< >TEIL  ---------->DOF2         --------->AHL20(2)      <---------ZAT6    <---------MYB52(1)---------   ttccttcaccaaaagaacaaaaagtagtgactcatttaatgaaaagagaataaaaggagtgttcattaatgaaacaggtagctggagctctcattaataa  15333900                                                                                         <---------ANAC46                                                                                         <---------ANAC58                                                                                         <---------ANAC58                  --------------->AGL15                                              <---------------AGL15                 ----------------->AG                                                --------------->AGL15                 ----------------->AGL1                    <---------AHL20(2)        <----------DOF2<            <------ZmHOX2a(1)                          <---------ICU4               <---------------- <---------ARR14(2)         ---------->DOF2            --------->YAB1               <---------------- --------->ARR14(2) ---------->DOF2  --------->YAB1    <--------HAHB4            <----------DOF2    < ------ZmHOX2a(1)====================================================================================MADS_MADS >YAB1--------->AtLEC2  ----------->GT1               <---------ATHB12     --------->HSFB2a(2)-------   gaggaaccatgcgaggattaccaaaagagtaaaagacactcataaacttagactgaatcatttttttgttttgttttctagggctttcttttcttggaaa  15334000                                  --------->ARR14(2)                                  <---------ARR14(2)                              ------>ZmHOX2a(2)                             <------ZmHOX2a(2)                            --------->ARR14(2)                                    --------->ZAT2                          <---------MYB46(3)                                      <---------ZAT2                         <---------ANAC46                                        --------->LBD16                         <---------ANAC58                                        ------>NtERF2         <---------ARR11(3) <---------ARR14(2)                                  --------->LBD16 ---------DAG2     *TSS <---------LBD16                                        <---------LBD16 -AGL1   --------->ARR11(3)<------NtERF2                              <---------ALFIN1 -AGL3  <---------CCA1(2)<---------ANAC58                          --------->ANAC58 ----------DOF2   ------------>CBF<---------ARR11(3)               --------->ANAC46 -->ARR14(2)     <<<<<<<<<<<<<<<<<LFY          --------->LBD16     --------->ANAC58              ----   cgctttatctaaatcttttgaacaatggcggatccagttcttcaatctccgaaaaactcacatttcttccagccacttcttcccggcttcgactcttacc  15334100                                                                                     <---------KAN4(1)                                                                                     --------->KAN4(1)                                                                                     <---------HSFB2a(1)                                                                                     --------->HSFC1(2)                                                                                     --------->HSFB2a(1)                                                                 <----------DOF2     <---------HSFC1(2)                                                           <---------ICU4           <---------KAN4(2)                                                           --------->YAB1       --------->HSFB2a(2)                                                        --------->YAB1          <---------HSFB2a(2)                                                      --------->AHL20(2)   <-----------RAV1(1)                 ----------->GT1                  <---------ANAC58    <---------ANAC58    --------->ZAT14        <---------At4g35610    <---------ANAC58    <---------AtLEC2     ------>ZmHOX2a(1) ----------->AtSPL8--------->AHL20(2)             <---------ANAC46    <---------ANAC58--------->KAN4(2)   ttgtactactctcttatacgagtaaatacagcttatgttgagagagatggtttcgttttaataatctcttttgcatgttgttgcagaacattcctgtgaa  15334200                                                          ------>NtERF2                                                         --------->TGA1a                                                         <---------TGA1a                    <--------                                                         --------->O2                 <------ZmHOX2a(2)                                                      ----------->HVH21               --------->CCA1(2)                                                      --------->DEAR3(1)             --------->AGP1                         --------->MYB52(1)          --------->DEAR3(2)              <---------ARR14(2)                  --------->ANAC46               ----------->ARR10                   --------->ARR11(3)                  --------->ANAC58           --------->At4g35610                     <---------ARR11(3)                  --------->ANAC58       --------->ALFIN1<---------O2                --------->ARR14(2)          --------->ANAC58          <------ZmHOX2a(1)--------->MYB46(3)       --------->ANAC58  <----          --------->ANAC58  --------->TOE1(2)<---------At4g35610              --------->ANAC58<------   gtttttctcaaaacgcatacaaggaagaaacgaaggaaggacagtggagctaagaaccgacgcgtctgaaaaaacttggcaagttaagatccaaggtcgg  15334300                                                          <---------TOE2(3)     <----------DOF2                                                    --------->ARR14(2)         ------>ZmHOX2a(2)                                      --------->GLK1(1)  <-----------GT1      <------ZmHOX2a(2)                                    --------->ATHB12<---------ARR11(3)       <-----------ARR10                               --------->ANAC58     <---------ARR14(2)       --------->ARR11(3)        <---------ZAT18     --------->At4g35610     --------->ARR11(3)       <---------ARR11(3)        --------->ZAT18     <---------At4g35610  <---------ANAC46            --------->ARR14(2)        --------->ZAT14     <------NtERF2       <---------LBD16              <---------ARR14(2)        <---------ZAT14    ------>NtERF2      --------->ALFIN1               --------->GLK1(2)       --------->ALFIN1--------->ANAC58  <-----------------AGL1             <------ZmHOX2a(1)    --------->ZAT6     --------->ANAC58  ----------------->AGL1            <---------HSFC1(2)  --------->MYB52(1)  --------->ZAT18 <---------GLK1(1)<---------YAB1      --------->HSFC1(2) ---HVH21 <---------ANAC46--------->DEAR3(1) <---------ZAT2                --------->HSFB2a(1)     <- --NtERF2 --------->At4g35610  --------->ANAC58--------->ALFIN1        --------->ANAC58            -- ---DEAR3(1)   ---------->DOF2<---------ZAT18--------->ZAT2            --------->ANAC58      <-------   agactaacagtgggctggaaagagttcgccagcgcgcatgatttccgagttggggatattatcgttttcagacacgaaggatctttggtatttcatgtca  15334400                                                  <-----------RAV1(2)                                                  --------->YAB1                             <------ZmHOX2a(1)                                               --------->YAB1                              <---------TOE1(2)            <---------ZAT2                     <---------ICU4                              --------->LBD16       --------->PCF2             <---------At5g28300<------ZmHOX2a(1)                    <----------      <---------PCF2              ------->TEIL<---------ATHB12                            <---------LBD16 --------ZAT14           <-------TEIL<---------RAP2.6(3)   --------->TOE2(3)           ------>MYB46(1) ------->ZAT14          --------->GLK1(2)     --------->ICU4                           ------>MYB83 ----HVH21<-----------RAV1(2)    <-----------GT1  <---------ICU4                  <-----------GT1  <-   ctgcattgggacccagttgctgtgagattcaatatgtaccgtcttgcaataatcaggagaacattagtaagttgtcttctgtttttaccttcccaggaaa  15334500  Previous    Next  AGI:  At4g31660.1    Description:  transcriptional factor B3 family protein. similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT2G24700.1); similar to reproductive meristem gene 1 [Brassica oleracea var. botrytis] (GB:AAC18082.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 15334019    to: 15335198    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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