Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                <------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              -------                                                                                         --------->ALFIN1                                                                                        <------------                                                                                       <------MYB46(1)                                               --------->ZAT2  <---------ARR11(1)      <------MYB83                           <---------YAB1      <---------ZAT2  ------->TEIL           <---------AtMYB61                        <---------YAB1       <------NtERF2     --------->GLK1(2)    <---------MYB52(1)                      <---------ICU4        --------->LBD16    --------->ARR14(2)  --------->LBD16                      --------->YAB1       --------->DEAR3(1)  <---------ARR14(2) <---------HSFB2a(2)                     <---------YAB1       <---------LBD16   --------->ANAC55(2)   --------->HSFB2a(2)                   <---------ICU4         --------->ATERF1(1) <---------CCA1(2)  --------->SPL7                  <---------YAB1          <------NtERF2     <---------ANAC55(2)  <---------LBD16                <---------ICU4    <---------ANAC58     <---------ARR11(3)      <---------SPL7 <------      <---------At4g35610--------->YAB1 <---------DEAR3(1) <-------TEIL  --------->ARR14(2)----------      ----------->RAV1(2)<---------ICU4--------->ATERF1(1) ------->TEIL  --------->GLK1(2)<----------  <---------SPL7--------->YAB1    <---------ANAC46     --------->ARR11(3)<---------ARR14(2)----------  <-----------HVH21--------->YAB1 <---------ANAC58     <---------------AtSPL3 <---------ANAC58------- ------>YAB1 --------->REM1(1) <-----------RAV1(1)     <---------------AtSPL8 <---------ANAC58<------   tcatcgtcccctgcttcatcatcatcatcatcactgtcgtagtcgccggagctagaagatgtacgtatctgtgagaaactgcgtccggaaggtgtgacgt  15324300                                                                                        <---------HSFB2a(1)                                                                                        --------->HSFB2a(1)                                                                                        <---------GLK1(1)                                                                                        --------->GLK1(1)                                                                                       <---------ARR11(1)                                                                                       --------->GLK1(2)                                                                                       ------->TEIL                                                                                       <---------ARR14(2)                                                                                       --------->ARR14(2)                                                                                       <-----------ARR10                                                                                       ---------->TaMYB80                                                                                      <---------ARR14(1)                                                                                  ------>NtERF2                                                                                  <---------ATERF1(1)                                                                                  --------->LBD16                                                                                 --------->DEAR3(1)                                                                                 <---------ATERF1(2)                                                                                 --------->RAP2.3(2)                                                                                 --------->ATERF1(2)                                                                                 <---------DEAR3(1)                                                                                --------->DEAR4(2)                                                                                --------->ATERF1(1)                                                                                <------NtERF2                                                                                --------->RAP2.6(1)                                                                                <---------LBD16                                                                                --------->ERF1                                                                                --------->ORA47(2)                                                                    <---------ATHB12  <---------CCA1(2)                                                             --------->LBD16    --------->RAP2.3(1)                                                            <---------ANAC46   <---------RAP2.3(1)                                                            <---------DEAR3(1) <---------ATERF1(1)                                                           --------->ATERF1(1) ------>NtERF2                                                           <---------At4g35610--------->DEAR3(1)                                                           <------NtERF2      --------->RAP2.3(3)                                                           ------>NtERF2      --------->RAP2.3(2)                                                           <---------LBD16    --------->ATERF1(2)                                                          <---------ANAC46    <---------ATERF1(2)                                                          <---------RAP2.3(1) ------->GAMYB   ------>NtERF2 ---ANAC58                                                <---------ATERF1(1)--------->DEAR3(2) ---O2                                                   <---------RAP2.3(2) --------->ATERF1(1) ---ANAC58                                               <---------RRTF1(2)  <---------MYB55(2) ---TGA1a                                                <---------DEAR3(1)  --------->MYB46(3) ---bZIP60(2)                                            <---------RAP2.6(2) --------->RAP2.3(1)   -- -->TGA1a                                               <---------At4g35610  --------->ERF1  -------- -----------TaNAC69(2)                                  <---------LBD16     --------->ZAT2   -------- ---ANAC46  <---------O2                               --------->ALFIN1     <---------At4g35610   <-- ->HVH21    --------->ANAC46               <---------HSFB2a(2)    --------->GLK1(1)<------NtERF2 <--- -HVH21     <---------TGA1a           <------NtERF2   --------->ZAT14       <---------ZAT2   ------>NtERF2 ->TGA1     --------->TGA1a --------->AtMYB61        --------->ALFIN1       --------->At4g35610  <--- -->O2      --------->O2  >>>>>>>>>MYB2    --------->HSFB2a(2)<------NtERF2 <---------ATERF1(1) <---- ---ANAC55(1)<-----------HVH21      <---------DEAR3(1)<---------ZAT14      --------->ANAC46<---------LBD16   ggaaaaccatcttcacgtcgagtctgaaaaccaaaacgtcgtcgtctcgaagacagtgtgcggcggagaaatcatcccagccgccggcgaatctccggcc  15324400 ------->ZAT14           --------->LBD16 ->LBD16                --------->ANAC46                                       --------->At4g35610 ---------->SPL14--------->GLK1(2)                                <---------At5g28300 -------MYB52(1)<---------ARR14(2)                               <-----------GT1 ----------->GT1 ------SPL7     <---------GLK1(2)                       --------->ANAC58       <---------ZAT14 ------RAP2.6(3)--------->ARR14(2)                      --------->ANAC58       <---------At4g35610 -----MYB46(3)<---------TOE1(2)--------->At4g35610   <---------MYB52(1)      --------->ZAT18      <--   gttcagtctcacatcccagattctatccgaagcatcagaagtcagtttcaatttcgttaagccagttttaccctctaagtgagcagtgaaaaactcatca  15324500                                                                                                  ---            ----------->RAV1(1)           <--------P                                              ---           --------->MYB46(3)        <---------ANAC46                                      --------->ALFIN1         ----------->RAV1(1)         <---------ANAC58                                   <---------TOE2(3)    --------->At4g35610              <---------ANAC58                               --------->CCA1(2) ----ZmHOX2a(1)  ----------->HVH21 --------->GLK1(2)                      ----------->GT1<---------ANAC46   ggaattatctgcaacaacagtgacaactaaatttgagtttcttggtaagttgagagagagagagagagacagagagaggttactagatttgaggtgtgtc  15324600                                 --------->HSFB2a(2)                        <---------DEAR3(2)                        <------MYB83                        --------->MYB55(2)                        <---------MYB46(3)                        <------MYB46(1)                       <---------DEAR3(1)                       <---------DREB2C(2)                     ------------>AtMYB77                     <-----------HVH21                 --------->ANAC58         ----------->HVH21  <------MYB46(1)        --------->ATHB12         ----------->TGA1   <------MYB83           <---------HSFB2a(1)                          <----        ------>ZmHOX2a(2)<-------GAMYB    <---------ARR11(3)                             --------->ARR11(3)       --------->At4g35610<---------MYB52(1)   <---------MYB46(3)                        <---------ARR11(3)       <---------At4g35610<--------P      --------->ARR11(3)                       <---------ANAC58 ------>ANAC58     --------->DAG2<---------HSFB2a(2)   --------->ANAC58            <---------ANAC58 ------>ANAC58   ---------->DOF2------>ZmHOX2a(2)  <---------HSFC1(2)  <----------DOF2 *TSS <--------   cagcaagtgatctgacgaaaaaaggtcggttggatcgagaagaagatagtggatgattcgccattgttgaactctttaagttatttcttgaggtctttat  15324700                                                                                    <---------AHL20(2)                                                                                   <---------AHL20(2)                                                                                   <---------AHL20(1)                                                                            ----------->GT1                                                                       <---------AHL20(2)                                                                       --------->YAB1               <                                                                       <---------ICU4               -                                                                       --------->AHL20(2)           <                                     <----------DOF2                   <---------AHL20(1)       -----                                   ---------->ID1                      <--------ATHB1          ------                                  <-----------GT1                     --------->ICU4--------->AHL20(2) -----TOE2(3)             <----------DOF2                       ----------->GT1    --------->AHL20(1) --DOF2 <-----------TBP ---------->ID1              <---------ZAT6  --------->YAB1 --------->AHL20(2)   ggatttttggttttatagccaaatttgtcttttttttttctttttttttgtttagtcttatacgttttgttaataattttgtaaatttaattcttcaacc  15324800                                                             --------->HSFB2a(2)                                                             --------->ANAC55(2)                                                       <---------TOE2(3)       <---------AHL20(2)                          -------->HAHB4      <---------YAB1             --------->YAB1    --------->YAB1     <---------AHL20(2)        <---------ARR11(3) --------->ICU4 <---------CCA1(1)             --------->ARR11(3) <---------ATHB12 <---------RVE1(1)        <---------AHL20(2)      <---------YAB1             <-----------GT1 ---------AHL20(1)    --------->ATHB51          ------>MYB46(1)            <---------AHL20(2) -------->ARR11(3)    --------->AHL20(2)        ------>MYB83 <---------HSFB2a(2)                  --- ---------ARR11(3)--------->ICU4<---------YAB1<---------MYB59<---------ANAC55(2)   <---------MYB52(1) -->GAMYB<---------YAB1   --------->AHL20(2) <---------ANAC55(2)       --------->AHL20(2) --------->YAB1 --->MYB46(3)     --------->At4g35610        --------->ANAC55(2)       --------->ATHB51  <-------TEIL   aagatatttttatttttgtcagcattatttaaatatcatagccaaatacctaatgataatgttatggaacccattatttaaacccgtttgattcatacta  15324900                      ----------->GT1                 ---------->DOF2          --------->ANAC58                     <-------TEIL          ----------->GT1                     --------->ANAC58                  <---------MYB46(3)   --------->ARR11(3)              <--------HAHB4                  <------MYB83        --------->CCA1(1)                <---------ICU4                <---------WOX13(1)    --------->RVE1(1)                --------->ATHB12              <<<<<<<<<RAP2.2   ----------->GT1     <---------AHL20(2) --------->YAB1      ------->TEIL<------MYB46(1) --------->AHL20(2)--------->AHL20(2)--------->ICU4            ----- ------>YAB1 <---------TOE2(3)---------->DOF2  --------->AHL20(2)     <---------YAB1           <-----   taagaacgaatcgtttagattggttcgtaaaaaaaagaaaatatccagtttaaattaaaagtctatcttaccatcattaccaagacagacatgtcccgtt  15325000                                                                 <---------ANAC58                                                                 <---------ANAC55(2)                                                                 =======================bZIP_DOF                           ------->TEIL                          <---------O2                           --------->GLK1(2)                     --------->TGA1a                        --------->ANAC58                         --------->O2                        --------->ANAC58                         <---------ANAC58                        --------->ANAC55(2)                      <---------TGA1a                        <---------ANAC55(2)                <---------ANAC46                     <---------ARR14(2)                 ----------->HVH21    ---------->DOF2  <------                     --------->ARR14(2)          ==========================bZIP_DOF           -------              --------->ATHB12                   <---------DAG2  <---------ANAC46            <-------   ----------->RAV1(1)--------->CCA1(2) <-----------HVH21--------->MYB52(1) --------->CCA1(2)-------- ---->ZAT14--------->WOX13(1)  ---------->DOF2   <----------DOF2<-----------------------TaNAC69(2) ----MYB52(1)<---------ATHB12  ============================================bZIP_DOF       --------->ICU4   cagtacaacagttcaatcactgggatacgaatctaaagacaatgtcagtaactttatcttgacggagacgtgaatgagataaaggctatgggataattaa  15325100                            --------->LBD16                     --------->DAG2                --------->ANAC58   --------->ANAC46 ---------->DOF2                                      --------->DAG2 ---AHL20(2)    --------->ANAC58                            --------->ATHB12 ------->TEIL -->AHL20(2)  --------->MYB52(1)                  <---------MYB59       ---------->DOF2 --YAB1      --------->ARR14(2)                  --------->ANAC55(2) --------->YAB1             <---- ->ICU4      <---------ARR14(2)           ----------->HVH21 <---------MYB46(3)----------->RAV1(2)<---   tatccaagacaagtggaaacggaaaagttccgaaatattatccagtgacatacttaactccatggttgcaaacataaagtacctggtccattttctaatc  15325200  Previous    Next  AGI:  At4g31620.1    Description:  transcriptional factor B3 family protein. similar to DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G31615.1); similar to reproductive meristem gene 1 [Brassica oleracea var. botrytis] (GB:AAC18082.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 15322458    to: 15324687    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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