Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                <----                                                                                                -----                 --------->ZAT14                     --------->ANAC55(2)                       ------                 <---------ZAT14                ----------->GT1                                ------        ----------->RAV1(2)                    --------->DAG2                                  <-----        <---------At4g35610                    <---------TOE1(3)                               ------        --------->ZAT2                         <---------TOE2(3)          <---------GLK1(2)    <-----        <---------ZAT2                 ----------->GT1                <----------DOF2         -------        --------->At4g35610      --------->MYB46(3)  <---------ANAC55(2)----------->ARR10     <------   catatgaaacagctgcgactaaactgcatcatagaacaaaccagtaaataaggttacttaaaatgtctatagctttgattctctataactctctagagat  15316700          --------->At4g35610        <-----------RAV1(2)       ----------------->AGL3     -------->P   ------>ZmHOX2a(2)  <------ZmHOX2a(2)                                                                <-----------GT1 <-----------ARR10                                                               --------->ICU4 --------->ARR11(3)                                                              <---------YAB1 <---------ARR14(2)                                                            --------->YAB1 --------->AGP1                                                                <--------ATHB1 <---------AGP1                                                                <--------HAHB4 <---------ARR11(3)                                                            <---------ICU4 --------->ARR14(2)                                                            --------->ATHB51 ---------CCA1(2)                                                             --------->ICU4 --ZmHOX2a(2)                                                                 --------->AHL20(2) ---->CCA1(2)                                                                 <---------ATHB12 --->AGP1 <---------At4g35610                                                 <---------ATHB51 --->ARR11(3)                                                             --------->MYB46(3) ----ARR11(3)        --------->LBD16                                ------>ZmHOX2a(1)<-----------GT1 --->ARR14(2)       --------->ANAC58            <----------DOF2     --------->At4g35610 ----ARR14(2)       --------->ANAC58      <-----------GT1           ----------->RAV1(2) -->GLK1(1)      <---------ARR14(2)       --------->YAB1        --------->ARR14(2)--------->YAB1 ---GLK1(1)      --------->ARR14(2)    --------->YAB1           <---------ARR14(2)<---------ICU4   ccagatctacccagatgaagaaccgcaattcaaagtttcaaaaatcacaactttaagaagttatcgaatcctctgaaccaataattatcacccctactaa  15316800                                                                                      <---------ATERF1(1)                                                                                      <------MYB83                                                                         ------>MYB83--------->MYB59                                                                         ------>MYB46(1)                                                                         --------->MYB52(1)                                                          <------ZmHOX2a(1)         <--------P                 --------->TOE2(3)                 ---------->DOF2     <---------MYB111(1)            <---------HSFC1(2)                <---------ZAT18          <---------MYB46(2)            --------->HSFC1(2)                <---------ZAT14          <---------MYB59<------MYB46(1)       --------->YAB1                         --------->ZAT18   <---------ZAT14<---------TOE1(1)  <--      <------ZmHOX2a(2)                       --------->ZAT14   --------->ZAT14<---------TOE2(1)  ---   ctaaatcgatcagaaacatccctaatcgaattgaatttgaagaaacagagcactaaagaaggagactacagtacctaatggacgaggtaggctccatttc  15316900                                                        ------>ZmHOX2a(1)                                                      ----------------->AGL1                                                  --------->HSFB2a(1)    <---------ANAC58                                                  --------->HSFC1(2)     <---------ANAC58         ---                                                  <---------HSFB2a(1)------->MYC3  <-------TEIL   ---                                        --------->ARR11(3)       <-------TEIL    --------->ARR14(2)    ------->TEIL---------->DOF2      <---------YAB1--------->KAN4(2) <-------MYC3<---------ARR14(2) -------At4g35610         --------->ATHB12        <---------HSFC1(2)--------->ANAC46              --- ------>At4g35610      ----------->GT1  <---------ARR11(3)     <---------ZAT18  --------->At4g35610   agcttgaacctccatggggaaagaagagtgatttgagttataaatctttggaaaattcctctcagggtacacgtttcttggcagattcaacgtgatttag  15317000                                                                                      ------>ZmHOX2a(2)                                                                                     <------ZmHOX2a(2)                                                                                    <---------ARR14(2)                                               <---------YAB1                       --------->ARR14(2)            ---------->DOF2                <---------ARR11(3)                       --------->GLK1(2)      <---------HSFB2a(2)                  --------->ARR11(3)                       <-----------ARR10      --------->HSFB2a(2)                  <---------GLK1(2)                        <---------ARR14(3)      --------->HSFC1(1)                   --------->ARR14(2)                       --------->ARR11(3)      <---------HSFC1(1)     <-----------GT1  <-----------GT1                       --------->ARR14(3) ------>ANAC46            <---------ICU4   <---------ARR14(2)       <-----------GT1 <---------ARR11(3) ------>ANAC58        --------->AHL20(2)--------->YAB1     <---------At5g28300     <------ZmHOX2a(1) ------>ANAC58     ----------->GT1 <----------DOF2        <-----------GT1        <---------TOE2(3)   acgcatttcgagaagaaagagcgattaaaaattacttctttatcagattttcatttcaatttacagtttttttcccttggattgaggatcttagttctta  15317100                                                               --------->DAG2                                                              ---------->DOF2                                                         --------->ANAC58                                                         --------->ANAC46                                                         --------->ANAC58        --------->ETT(1)                                                       --------->ZAT6          <-----------HVH21                                                    <---------WRKY45          <-----------RAV1(1)           <---------DAG2                           <---------WRKY38(1)<-----------GT1         <-----           <----------DOF2               *TSS      <<<<<<<<<WRKY6   <----------DOF2            <-----   agcgaggttacagctttttccagtggattactaaattggacgagagagtaatagtcaacactcaaaaagtctttaaccttctgtcggaacaagaagggct  15317200      <---------MYB52(1)     <---------At4g35610                                                                --------->YAB1     <-------GAMYB                                                                     <---------YAB1    <---------MYB46(3)                                                                 --------->ICU4    --------->MYB52(2)                  ---------->DOF2    --------->AHL20(2)        --------->YAB1 <-----------HVH21                --------->DAG2           --------->YAB1            <---------ICU4 ----ANAC58                      ---------->DOF2          <---------ATHB12          <---------ATHB51 ----ANAC58  <---------At4g35610---------->DOF2  <----------DOF2                    --------->ICU4   tgctgtccgttgctcatctcatatagtaaggcccaaaaggcccaaaggcttctttttccaattaaaactaatttttgtatagcgaaattatgatgaagaa  15317300            --------->ANAC46                         <-----------HVH21            --------->ANAC58                      --------->DAG2            --------->bZIP60(2)                 ---------->DOF2            ===============================================bZIP_DOF            --------->YAB1            <---------TGA1a           <---------AHL20(2)                ------>MYB83            --------->ANAC58         <---------AHL20(2)               <---------MYB59<---------GLK1(1)            --------->O2             <---------AHL20(1)   <---------DAG2------>MYB46(1)            --------->TGA1a          --------->AHL20(2)   <----------DOF2   --------->WOX13(1)     <---------AtLEC2       --------->ANAC46<-----------GT1     --------->YAB1<---------YAB1<--------   aatcgtttcatggcacgtcaaaaaactttcgcacaacaatttttttttacaaaagggtcacttttatcagaacctaatctatcatagagttcccatcaac  15317400                                              <------MYB83                                              <---------MYB46(3)                                              <------MYB46(1)                                              --------->MYB52(2)              <---------ANAC46                                             <---------AtMYB61           --------->YAB1                                            <--------P                  <---------YAB1                                     ----------->HVH21                <--------HAHB4                                   <------MYB46(1)                    -------->ATHB1                                   <------MYB83                       --------->ATHB51             <-                                  <---------TOE2(2)                   <---------ICU4           <-----                                --------->TOE1(2)                     --------->YAB1           <-----       <---------YAB1           --------->TOE2(2)                    --------->ICU4           <------       <---------ATHB12       <---------TOE2(3)                      <---------YAB1         ---------      ------>MYB46(1)         <---------TOE1(3)                      <---------ATHB51      <---------YAB1      ------>MYB83           <---------DOF5.7(2)                 ------------>CBF     ---------->DOF2 -ATHB12--------->YAB1 ------>ZmHOX2a(1)<---------ANAC46    <---------AtLEC2  <---------REM1(1)------   aaaaaacctatcatagagtctagtcctgtgttaacgtaggtgatgggttggtttcatggtttacatggacaattattatggtgtaagaaaaagatgatgg  15317500                                                                                --------->ANAC58                                                                   <-----------GT1      -------------                                        <---------DAG2      <-------TEIL   --------->ANAC55(2)     *TSS                               <----------DOF2    --------->ARR14(1)   --------->ANAC55(2) ------TEIL                      --------->ANAC46         <---------GLK1(2)--------->ANAC46 ----MYB46(3)                  <-----------GT1            --------->ARR11(1)    --------->ANAC58 ----------AtSPL8             <-------TEIL                <---------ARR14(2)    ----------->GT1 ---ANAC46      --------->MYB46(3)     <---------DAG2     --------->ARR14(2)    <---------ANAC55(2) >ATHB12      <-----------GT1--------->CCA1(2)      <---------AHL20(2)    --------->HSFB2a(2) --------->AtSPL8           <---------GLK1(2)      --------->AHL20(2)     <---------HSFB2a(2)--------   gtacacatattccatttaaccaatgtgaaagattcacatcacctttttcgatttttaatagattcggttttaccttctcgtaacgtaattctaagaaaag  15317600  Previous    Next  AGI:  At4g31600.1    Description:  UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G32272.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63129.1); contains InterPro domain Protein of unknown function DUF250 (InterPro:IPR004853) Range:  from: 15314890    to: 15317141    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g31610.1    Description:  REM1 (REPRODUCTIVE MERISTEM 1); DNA binding / transcription factor. similar to transcriptional factor B3 family protein [Arabidopsis thaliana] (TAIR:AT4G31630.1); similar to reproductive meristem gene 1 [Brassica oleracea var. botrytis] (GB:AAC18082.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 15317505    to: 15320026    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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