Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <---------YAB1                                                                    --------->AHL20(1)                                                                    <---------AHL20(1)                                                                    <---------AHL20(2)                                                           --------->YAB1                                            <----------DOF2--------->ATHB12                    --------->YAB1     <---------WOX13(1)  <---------ICU4                   <---------YAB1     <---------ANAC58     -------->HAHB4                  --------->AHL20(2) <---------MYB46(3)   --------->ICU4       --------->ANAC46         --------->ARR11(3)        <---------YAB1       --------->ANAC58         <---------AHL20(1)      --------->YAB1       --------->ANAC58         --------->AHL20(1)     <---------AHL20(2)      --------->LBD16        --------->AHL20(2) <---------ZAT6      --------->AHL20(2)           ----    --------->TOE1(2)  ---------->DOF2<---------ANAC58 <---------ATHB51            ----------->GT1 -----GT1---------->DOF2 ----------->GT1--------->WRKY12<---------ICU4    <---------TOE2(3)  ------->TEIL   cattatcccacgaaagagaatattataaagtttatatattggttgactttgtgttaaataatgatgggattatattaagaaaaacttgttaaatgaatat  15294800                                                                                               <-----                                                                                               ------                                                                                      <---------ARR11(3)                                                                                      --------->ARR11(3)                                                                                      --------->ARR14(2)          --------->YAB1                                                              <---------ARR11(1)       --------->YAB1                                                                 <---------ARR14(2)       <---------ICU4                                      --------->CCA1(2)         <---------CCA1(2)      <---------ATHB12               --------->CCA1(2)    --------->AHL20(1)       --------->YAB1 --------->GLK1(2)                <---------TOE2(3)      --------->AHL20(2) <-------MYC3       <----- ----->YAB1     --------->WOX13(1)<---------YAB1  ----------->GT1           ------->MYC3       ------   cagaatcaataatcgtatcaattagacaacttgattaagatttgattctggtcagtaaaatatatgaaacatgctccatatgctatcatatcttcaataa  15294900                                    <---------HSFB2a(1)                                    <------MYB46(1)                                    <---------HSFC1(2)                                    --------->HSFB2a(1)                                    --------->HSFC1(2)                                    --------->At4g35610                                    <------MYB83                                    <---------At4g35610                                   <---------TOE1(2)                                  <-----------RAV1(2) --------->MYB52(1)          <---------ICU4 ----AHL20(2)                --------->YAB1 --->AHL20(2)               <---------YAB1                    <----------DOF2          <----------DOF2 ----AHL20(1)               <---------ATHB12                ------>ZmHOX2a(1)       <---------ALFIN1< --->AHL20(1)      <---------ARR14(2)               <-----------GT1         ---------->DOF2     <----   aataaacgaattgaagacgagtatatcgctatcatggcaggttccaattagttatctccatcctcttttttgtttccacaaaggagccactttgtgttct  15295000                                                                                     ----------->GT1                                                                                     --------->ANAC55(2)                                                                                     <---------ANAC55(2)                                                                                     <---------ANAC46                           <-----------GT1                               --------->ANAC58       >>>>>                   <------MYB83                                        <---------ALFIN1      <------MYB83                   ----------->GT1                                    <---------At4g35610    <------MYB46(1)                   <------MYB46(1)                   <---------YAB1   --------->At4g35610    --------                   <---------MYB46(3)          <---------YAB1 <---------AHL20(2)     <---------ANAC58 ---------YAB1   <---------WOX13(1)          --------->ZAT6   --------->AHL20(2)     <---------ANAC58 ------DOF2    --------->ATHB12         ----------->GT1   --------->ICU4 --------->ANAC58   ---------   ttatttttgaaaatgtttgattggttaattaaccaagtgaagttgtaatactattatgcaagaattaattgcagcactctatgggtttcgtaatttggtt  15295100                                                                      <---------YAB1                         <---------At4g35610                        --------->YAB1                         --------->At4g35610                        -------->HAHB4                     <-----------HVH21                              <---------ICU4                    --------->ANAC58                               <---------ATHB12                    --------->ANAC46                               --------->ICU4                    --------->ANAC58                       <-----------HVH21       <---------ANAC58  <XXXXXXXXXXXXXXXXXXXXXMIR402      <---------AHL20(1)   <---------MYB46(3)        <---------ANAC58 < >>>>GT-1     --------->TOE2(1)     <---------ARR11(3)   <---------DEAR3(2)    ---------->ID1-------- --->GT1      --------->TOE1(1)     --------->ARR11(3)  --------->ETT(1)     <-----------RAV1(1) <--- >MYB59      <------NtERF2   <------------CBF         <-----------HVH21  <---------YAB1  <----------DOF2   aatagtttaatgggcctcgtacaagtcagcccattggatatatttcagattaatcgggtcgggtcacaaatgattatccttgttgccttgcctttgccaa  15295200                                                                   --------->At4g35610                                                                   <---------HSFC1(2)                                                                   --------->HSFC1(2)                                                          --------->ANAC58                                                          --------->ANAC46       *TSS              <---------ANAC58                 --------->ANAC58  --------->MYB52(2)     <---------ANAC58               ----------->RAV1(1)  <---------MYB46(3)<---------ICU4 <---------ANAC58     ============================RAV <---------TOE1(2)  --------->YAB1 <---------ANAC58    ------->GAMYB ---------MYB52(1)--------->ARR11(3) ---------->ID1  --------->ANAC58   ----------->RAV1(2) ---->CBF     --------->YAB1   <----------DOF2       --------->ANAC58   <---------ANAC58  --------->MYB46(3) ------ATHB12--------->AHL20(2)<---------DAG2        --------->ANAC46   <---------ANAC58--------->ANAC46   tcgtttgtttccaaaataaaaatcatggcgagacttttcgtctctatccctatgcaacccacacaaataagcttccctgcgtcttcttctcagccactat  15295300                                                                                      <---------ZAT2                                                                                 <---------ANAC46                                                                                 --------->bZIP60(1)        --------->ATERF1(1)                                                      <---------TGA1a        <------NtERF2                                                            --------->O2       <---------ATERF1(1)                                                       <---------O2       ------>NtERF2                                                             --------->TGA1a       --------->LBD16                                                           <---------bZIP60(1)      --------->RAP2.3(2)                                                     ----------->TGA1      <---------ATERF1(2)                                                     ----------->HVH21      --------->ATERF1(2)                                                    <-----------HVH21      <---------DEAR3(1)                                                   --------->ALFIN1      --------->DEAR3(1)                                                  --------->LBD16     --------->ERF1                                                      --------->ANAC55(2)     --------->ATERF1(1)                                                 <---------ANAC55(2)     --------->RAP2.3(1)           <---------LBD16                       <---------ANAC55(1)     --------->ORA47(2)         <---------At4g35610                      <---------ANAC46     <---------LBD16            --------->At4g35610                      <---------ANAC58    --------->LBD16             --------->ZAT2                   ------------>AtMYB77 --------->ZAT2    ------>NtERF2               <---------ZAT2                   ==========================MYC_MYB    <---------ATERF1(1)     --------->ALFIN1               --------->GLK1(2)--------->REM1(2)   --------->ANAC46       <---------MYB46(3)          --------->LBD16    <---------ANAC58   --------->DEAR3(1)    <---------AtMYB61           --------->ANAC46 <---------ARR14(2)  <---------LBD16  <-----------GT1--------->ALFIN1  <---------LBD16   --------->ARR14(2)   tatctccgccggcgaacaatttcaccgatggtggagctgggggattatgtcttacacggagaatcagagacagttccgtggtgacgcgagcagggcctag  15295400                                                <---------ALFIN1                                              --------->ABI4(1)                                              ------>NtERF2                                              <---------ATERF1(1)                                             --------->ANAC46                                             --------->RAP2.3(3)                                             --------->RRTF1(3)                                             --------->RRTF1(2)                                             --------->DREB2C(2)                                             --------->DEAR3(1)                     --------->ANAC58        <---------ATERF1(2)                                 <---                     --------->ANAC58        --------->ATERF1(2)                                 <---                    --------->SPL7           --------->RAP2.3(2)                             <-------                 <---------ANAC58            --------->RAP2.6(2)            ------>NtERF2    --------             <---------ANAC58               --------->ORA47(2)             ----------->HVH21---------             <---------ANAC58               --------->RAP2.3(1)          --------->At4g35610---------     --------->At4g35610                    --------->ERF1        --------->YAB1            <--------     <---------At4g35610      ------>ZmHOX2a(1)<------NtERF2     <---------ATHB12           <-------- --------->ANAC46<---------ANAC58          <---------RAP2.3(1) --------->WOX13(1)          --------->HSFB2a(1)   tacgagcagctacttgctcgcgttcgccattcctgctactcttatcgccgccactgtcttcacttcaatcaaaatcgctgacaaactcgacgaagatttc  15295500   <------ZmHOX2a(1)   =================HOX2a_HOX2a   ================HOX2a_HOX2a <---------TOE2(3) ------ANAC58            <-----------HVH21 ------ANAC58  ------>ZmHOX2a(1) --GLK1(1)   ------>ZmHOX2a(2)             <-------TEIL ->GLK1(1)  <------ZmHOX2a(2)             --------->ARR14(1)                   <----------DOF2 >ARR14(2) --------->ARR11(3)            <---------ARR14(2)                   <---------ANAC58 >ARR11(3) --------->ARR14(2)            --------->ARR14(2)                   <---------ANAC58 -ARR11(3) <---------ARR11(3)            <---------GLK1(2)             <-----------GT1 -ARR14(2) <---------ARR14(2)<---------CCA1(2)                    <---------ZAT6  --------->MYB59   cttgaggatgtaagatccttcaatcttcgtcatatctaattcagattcgatttttgtctagctctctagtgttttaccttgctttaggtctagtttgtct  15295600                                <---------AHL20(2)                        --------->ANAC58                   <---------MYB46(3) <---------LBD16                --------->YAB1  --------->AHL20(1)          --------->ANAC55(2)   <---------AHL20(1)         <---------TOE2(3)      --------->AHL20(2)  --------->ANAC58         <---------TOE1(3)     --------->AHL20(2)   --------->ANAC58           <-------GAMYB         --------->MYB59--------->ANAC58          ---------->DOF2 <----------DOF2               <----   cagtcttagtttaggtaatcgtggttaagcaaattttatttgggggaaacaattaagcaaatgactaacttttgaattttgggttgaattggttcaagtt  15295700  Previous    Next  AGI:  At4g31560.1    Description:  HCF153. similar to unnamed protein product [Vitis vinifera] (GB:CAO40717.1) Range:  from: 15295207    to: 15296247    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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