Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100               ----------->HVH21           ----------->RAV1(2)                                                              <--------  ----------->HVH21                                                                        <---------YAB1 <---------MYB52(2)                                                                      <---------ICU4 --------->DEAR3(2)                                                          ----------->HVH21 ---------At4g35610                                                          --------->WRKY12 -------->At4g35610                                     <----------DOF2    --------->At4g35610 ---MYB46(1) ------>ZmHOX2a(1)                      <-----------GT1 ----------->HVH21  <---------ANAC55(2) ---MYB83--------->ARR14(2)                     <----------DOF2  --------->ZAT6        --------->ANAC55(2) ---P    <---------ARR14(2)             ---------->ID1 <---------DAG2      <---------At4g35610   ggaactgacccgttcctgacccgatacaagagtagcccatttggcccattcttttagcctttttgtaacactgacacagttgacgaattaagtattactg  15248100                                                                                   <----------DOF2                                                                                   <---------DAG2                                                                                ------->TEIL                                                                           --------->YAB1                                                              <-----------GT1--------->ANAC55(2)                                                              <---------AHL20(2)<-----------GT1                                                           <---------ICU4 <---------ATHB12                                        <-----------GT1   --------->AHL20(2) ----------->GT1      --------->MYB46(3)             --------->YAB1       <---------AHL20(2) <---------ANAC55(2) ---GT1                            --------->AHL20(2)    <---------WOX13(1)<---------ICU4   tatgagtaaccaaaaaacatttttctaatattgtttttaaaataactacttacaacttgattaattacttcgtttaatcatgtaacttttttttcttcca  15248200                                              <---------ANAC55(2)                                    ------>ZmHOX2a(2)                                   <------ZmHOX2a(2)                            --------->YAB1    --------->ANAC55(2)                            <-------                    <---------At5g28300  --------->YAB1                                  <---------ARR11(3)                   <-----------GT1 --------->CCA1(2)                                 --------->ANAC55(2)               --------->AHL20(1) <---------ARR11(3)                            <---------YAB1               <---------AHL20(1) --------->ARR11(3)                           --------->AHL20(2)               --------->AHL20(2) --------->AGP1                               --------->AHL20(1)               <---------AHL20(2) <---------AGP1----------->HVH21  ---------->DOF2   <---------ANAC55(2)              --------->AHL20(2)  <-----------ARR10             <---------YAB1 <---------AHL20(1) <--   aattctaatctctctattaaattactgcatttataagatctaaacatcatgtgatatgttcaaaatatgaaaagagaagaatataatacatgattttact  15248300       <---------AHL20(2)      <---------AHL20(2)                        <---------ZAT6          ----------->GT1      --------->AHL20(2)                    <---------YAB1          --------->ANAC58                -      <---------AHL20(1)                 --------->AHL20(2)         --------->ANAC58            <----   <---------AHL20(2)                    <---------AHL20(2)        --------->DEAR3(1)          <-----  --------->AHL20(2)                     --------->AHL20(1)     ------->GAMYB           --------->MYB52(1)  <---------AHL20(2) --------->ICU4     --------->AHL20(2)     --------->MYB46(3)     <---------MYB52(2) ----GT1        --------->YAB1          <---------AHL20(2)    <---------At5g28300 <------ZmHOX2a(1) - -------YAB1<---------AHL20(2)     <---------MYB59           <-----------GT1    <---------TOE2(3)  --   acgattaattttttttaatcgcaatgttttgtttttgcctaattttattagtggaagaaattttaaccgcaggcctgtaatttaggaaactaactattca  15248400                                                                     <---------ICU4     --------->YAB1                                                  --------->ATHB51     --------->AHL20(2)                                             <---------YAB1          <--------    <---------ATHB12                                    ------>ZmHOX2a(1)           ------->TEIL ----------->CBF                             ------------>CBF *TSS--------->YAB1 <---------MYB52(2) -----At5g28300                    <----------ID1      --------->TOE2(3)         --------->MYB46(3) ------GT1                       --------->MYB52(1) <-----------GT1 --------->ICU4------->GAMYB    -- -------->LBD16                <---------MYB52(2)<---------DAG2<----------DOF2--------->REM1(1) ----- ------->ANAC46          <----------ID1    <-----------GT1  <---------ALFIN1------>ZmHOX2a(1)  <-----   cccccaattaaaaaaaaaaacaagaagacgacaaataacgagaaattaccaatttttcctcaacactttcattatttcctacaacgaacttctccctcct  15248500                                      --------->DEAR3(1)                                     <------NtERF2                                     <---------LBD16                                     --------->RAP2.3(1)                                     --------->ATERF1(1)                                    <---------ATERF1(1)                                   --------->RAP2.3(2)                                   <---------ATERF1(2)                                   --------->RAP2.3(3)                                   <---------DEAR3(1)                                   --------->DEAR3(1)                                  --------->ERF1                                  --------->RAP2.6(1)                                  --------->ATERF1(1)                                  --------->RAP2.3(1)                                  --------->ORA47(2)                                 <---------RAP2.3(1)                                --------->ANAC46                                --------->ANAC58                                --------->ANAC58                ----------->GT1                             <---------ARR14(2)              <-------GAMYB                      <----                             --------->ARR14(2)             <---------DEAR3(2)            <---------At4g35610                             <---------MYB52(1)             <------MYB83                 --------->DEAR3(1)                            <-----------HVH21               <------MYB46(1)            ------->TEIL                           --------->LBD16        <---------At4g35610                 <---------ALFIN1                         <---------LBD16      <-----------HVH21<---------MYB46(3)    <---------SPL7                       --------->ARR14(2)  <-----------RAV1(2)--------->ALFIN1       <---------ABI4(2)     <----------DOF2   <---------ARR14(2) <---------ZAT2   <---------MYB46(3)       --------->ANAC46 -ALFIN1            <---------ANAC58--------->ABI4(1)      <---------DEAR3(1)       --------->ANAC58 ---->ZmHOX2a(1)    <---------ANAC55(2) <------NtERF2      <---------DREB2C(2)      --------->ANAC58 ->ZmHOX2a(1)       --------->ANAC55(2)--------->LBD16     <---------DEAR4(1)    --------->O2<-------GAMYB ----ALFIN1         <---------ANAC58------>NtERF2 --------->At4g35610            --------->ANAC46  >>   cctctcactttcaccatggattccgtctccggttacgccgccggagcaggtcagcctcgagtcggtgggaaaattgttcgaccacgacgcaccgctgttg  15248600                                           ------>ZmHOX2a(1)                                           ============================HOX2a_HOX2a                                        ===============================HOX2a_HOX2a                                        ------>ZmHOX2a(1)                                     =============HOX2a_HOX2a                                     <------ZmHOX2a(2)                                    --------->ARR14(3)                                    --------->ARR11(3)                                    <---------ARR14(3)                                    <---------ARR11(3)                                    --------->ARR14(2)                                    --------->AGP1                                    <---------ARR14(2)                                    <---------GLK1(2)                                   <---------GLK1(1)                                   --------->GLK1(1)                              =================HOX2a_HOX2a               --------->ZAT18------>ZmHOX2a(2)         <-----------HVH21    ====================HOX2a_HOX2a        --------->ALFIN1     ==================HOX2a_HOX2a      <---------ANAC58       =====================HOX2a_HOX2a      <---------ANAC58       <------ZmHOX2a(2)      <---------ANAC46      --------->ARR11(3)                  ------>ZmHOX2a(2)               <----     <------NtERF2          <---------ARR14(2)                 --------->GLK1(1)              -------    ------>NtERF2           <---------ARR11(3)                 <---------GLK1(1)              <------   <---------DEAR3(1)       --------->ARR14(2)                <---------AGP1              <------NtERF2   --------->ANAC58        --------->GLK1(1)  <---------At4g35610                        ------>NtERF2   --------->ANAC58        <---------GLK1(1)  --------->At4g35610                       --------->DEAR3(1)  --------->SPL7     <-----------HVH21------>ZmHOX2a(2)       --------->ARR11(3)      ------>NtERF2<- ====================================HOX2a_HOX2a              <---------ARR11(3)      --------->LBD16 <------ZmHOX2a(1)<------NtERF2   ----------->ARR10           <---------ARR14(2)     --------->ANAC58 ===================================HOX2a_HOX2a               --------->ARR14(2)     --------->ANAC58 -------HVH21--------->At4g35610 --------->LBD16             <---------CCA1(2)       --------->ANAC46 >>>>>GRF7   <---------At4g35610--------->LBD16      --------->TOE2(3)  <-------TEIL<---------LBD16<-   tcaggacgccgtgtgagcgccccgttcagagatcccgagatcctcctcagcaaaaccctagttggatctccaggctcgtttacaaacccgccagcgtaat  15248700           <------NtERF2          --------->LBD16         --------->RAP2.3(2)         <---------ANAC46        <---------LBD16        --------->ATERF1(1)        --------->RAP2.3(1)        <------NtERF2       <---------ERF1       <---------RAP2.6(1)       <---------ATERF1(1)       <---------RRTF1(1)       ------>NtERF2       <---------RAP2.3(1)      --------->DEAR3(1)      <---------DEAR3(1)     --------->RAP2.3(1)     --------->ERF1     --------->RRTF1(1)     --------->ATERF1(1)     --------->RAP2.6(1)    <---------RAP2.3(1)    ------>NtERF2    --------->LBD16                                                      <-------TEIL    <---------ATERF1(1)                                                --------->ARR14(2)      ------  <---------LBD16                                                      <---------ARR14(2)      <----- -----WOX13(1)                                                    <---------TOE1(1)           ------- -->ARR14(2)                                                 <------ZmHOX2a(1)  <-----------RAV1(2) ---ARR14(2)                               --------->HSFB2a(1)  <------ZmHOX2a(1)<---------TOE1(3) --------ANAC58                         ------>NtERF2  <---------LBD16<------ZmHOX2a(1) <-----------GT1 --------ANAC58  <-------TEIL<---------MYB52(1)  ------>ZmHOX2a(1)<---------TOE2(1)  --------------->AtSPL8   tgcttccggcgccggaaaattcatttcttccgtcgtcttctccgactcttcctcatcttcggaggaggacgaggattcatcttcaggtttgtaccattta  15248800                                                          -------->P                                                          --------->MYB52(1)                                                          <---------At5g28300                                                       --------->At4g35610                                                       <---------At4g35610                                                      --------->ANAC58                                                      --------->ANAC58                                                    ---------->DOF2                                               --------->ARR14(2)<---------ANAC46 --->AHL20(2)   <---------AHL20(2)             --------->GLK1(2) <---------ANAC58 ----AHL20(2)  --------->AHL20(2)              <---------ARR14(2)<---------ANAC58             <------ -->AHL20(2)<------ZmHOX2a(1)                  ------->TEIL   <---------MYB52(1)         ---------->DOF2   tttcagtttagataggattaatttgaatttttggtttattgtctggtcgaatctgaaagctaccgtttcgtttgaaatgtgaagtttgacttaaagcttt  15248900                                                                  ----------->GT1                                                                  <------MYB46(1)                                                                  <------MYB83                                                                 --------->MYB46(2)                                                                 --------->MYB59                                                               <---------MYB52(1)                                                      --------------->AGL15                      --------->ALFIN1                <---------------AGL15             <----------DOF2                         <-----------------AGL3        <----------DOF2                         <---------------AtSPL8     <-----------GT1<-----------RAV1(1)         --------------->AtSPL8 ----DOF2   --------->TOE2(3)         <---------MYB52(1)    <---------AHL20(2)      <-----------GT1   cccattttctctttcctttaatatgtgggacttaagagcagttaagcattgttgtactctatttagttaggttacttctaagctataaacttcatactaa  15249000  Previous    Next  AGI:  At4g31430.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO43934.1) Range:  from: 15248462    to: 15252535    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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