Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   <-----------GT1                <---------YAB1              --------->YAB1              <---------ICU4             --------->ICU4             <---------YAB1           --------->YAB1           -------->ATHB1           <---------ICU4                                                ---------->DOF2          <--           --------->ATHB51                                   --------->HSFB2a(2)               <----           <--------HAHB4       --------->ANAC58              <---------HSFB2a(2)     <-------------- -DOF2    --------->ICU4        --------->ANAC58        <---------AHL20(2)--------->DAG2<----------DOF2   ttgtttttgtgaattattattactccattagaacaagtcaaatacaagcttagaatttttaattctagataaacaaaaagcttcactcttcttttgtttg  15243300                                                                                                   --                                                              <---------------AGL15            ------           <---------YAB1                                     --------------->AGL15       --------->ANAC46    <----------DOF2      <-----------GT1          --------->DAG2       <---------GLK1(2)  --------->AtLEC2    <---------DAG2 <---------ARR11(3)            ---------->DOF2 <---------YAB1           --------->ANAC58 ---------GT1      --------->ARR11(3)       ----------->GT1  --------->ANAC55(2)  <---------YAB1   -- -------HVH21      <---------GLK1(2)       ----------->GT1   <-----------------AGL3       --------->ANAC58 ----------ANAC81<---------TOE2(3)   --------->YAB1        <-----------GT1        <---------AHL20(2)   tcacaactttattgttatttagatttttaacgagtttaataagaaatggaaaaaaggagttttacttaatatagattgtttgatattattccaagcaaac  15243400                                                                                              -------                                                                                              <------                                                         ------->TEIL                    ------>ZmHOX2a(1)                                           ---------->DOF2                        <---------AHL20(2)                                          <---------WRKY45             --------->GLK1(2)<---------MYB59 ---->MYB83                     --------->AHL20(2)    --------->ANAC55(2)        <---------AHL20(2) - ------------------>ANAC81      --------->YAB1  <----------DOF2    --------->YAB1--------->AHL20(2) < ---->MYB46(1)    --------->TOE2(3)       <---------WRKY38(1)  <---------AtLEC2 <---------WOX13(1)---   caaacaaaacaaaacaaaaacattagaaaaacaataaaaactagtcaaagctttttatgtattttgcaagaagaatttgttgatttatttcctaatttaa  15243500                                                                                 --------->DAG2                                                                             <---------AHL20(2)          --------->At5g28300                                                --------->AHL20(2)         ----------->GT1                                                --------->AHL20(1)      -----   <---------------AtSPL8                                               <---------AHL20(2)      <---- -->AHL20(2)                                                            <---------AHL20(1)    <------ ---AHL20(2)                                               <---------YAB1   --------->AHL20(2)------- -------->AHL20(2)                                  <---------AHL20(1)  --------->AHL20(2)    <------ ---------AHL20(2)                          ----------->RAV1(2)  <---------YAB1 ---------->DOF2 ----- ------>AHL20(2)        <-----------GT1    -------->P  <---------AHL20(2)  <---------YAB1  --------->AHL20(2)   atttatatgtacagtaatttgaaaacttactatttgtgaaatactaacctgtagtatatttttgattatgttattttattaaaaaagtcgtcataaaata  15243600                                          <---------ARR11(3)                                 <---------ARR11(3)                                 <---------AHL20(2)                                 --------->AHL20(1)                                 --------->ARR11(3)                                 --------->AHL20(2)  --------->At4g35610          ---------->DOF2    --------->AHL20(2)<---------AHL20(2)       <---------TOE2(3)     <---------AHL20(2)--------->AHL20(2) <---------TOE2(3)       --------->AHL20(2) ----------->GT1 ---->AHL20(2)          <---------MYB52(1)--------->ARR11(3) -----AHL20(1)      ------>MYB83 <---------AHL20(1)  <---------At4g35610           --------->DAG2 ---AHL20(2)        ------>MYB46(1)      <------ZmHOX2a(1)                       ---------->DOF2 -->AHL20(1)     <---------HSFB2a(1)   <---------TOE1(3)                    <------------CBF      <-- ---AHL20(1)     --------->HSFB2a(1)   <---------TOE2(3)          <---------AHL20(2)     --------->ICU4 ---->AHL20(1) <-----------GT1--------->AHL20(2)<---------YAB1    --------->AHL20(2)----------->GT1<-   ttttagattaatgaaagaaaccttccattaattaatatattaaggatattaaaatagctgctaatagtttaattagtgtattgaaaaggtaaaaatggtt  15243700                          ------->GAMYB                        ------>MYB46(1)                        --------->ZAT2        --------->ANAC46                        ------>MYB83          --------->ANAC58        <<<<<<<<<TBF1                      --------->MYB46(3)      --------->ANAC58        XXXXXXXXXXXXXXXXXXXX>MIR838                      <---------MYB111(1)   ---------->DOF2 <---------At4g35610                     <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->At4g35610     <---------ALFIN1=   <------------CBF -------->P            --------->ANAC46<---------ICU4       <<<<<<<<<TBF1        < -------ANAC46 --------->DAG2        --------->ARR14(2)  <---------ATHB12   <<<<<<<<<TBF1   ========= --------LBD16---------->DOF2*TSS--------->ZAT6         <-----------HVH21<<<<<<<<<TBF1      <--------   atggggattgagagaaaaaagctaccaactgcgaaacactatccccacaagcaaaccccatcatctcccttcttcttcttcttcttccacttccctttgt  15243800                 <---------GLK1(2)                --------->At4g35610                <---------ZAT2              <---------WRKY12            <-----------HVH21                                         ----------------->AG  <--------           --------->TGA1a<---------GLK1(1)                        --------->GLK1(1)       <---------           ==================================bZIP_DOF              <---------GLK1(1)     ------>ZmHOX2a(2) ====================bZIP_DOF                             <---------At4g35610           <------ZmHOX2a(2) ----------DOF2 <---------At4g35610                    <---------At4g35610             <---------ARR14(2) ====================bZIP_DOF            <-----------GT1  --------->At4g35610          --------->ARR14(2) --DOF2  <-----------RAV1(2)      <----------DOF2      --------->At4g35610      --------->ATHB12   aactttcaatctcaggtcagcttcttcgatttccttctttatttctccatgtttttcatctgcttactgatttccaattcagtgatttggatccgtcgtt  15243900                                                                              --------->ARR14(2)                                                                              <---------GLK1(2)                            <---------TOE2(2)                            --------->ARR14(2)                            <---------TOE1(2)                            <---------ARR14(2)                    <---------At4g35610                       ------>ZmHOX2a(1) -MYB52(1)          --------->At4g35610      ========================HOX2a_HOX2a --HVH21         <---------At4g35610         <------ZmHOX2a(2)<----------DOF2 <---------ARR14(2)   tctaatttcgctagggttcttctgctctcatatgtttttatatcgcgatcagttttctaaaatcctttgattttgaatccgattctcactctctcttggt  15244000                                                                                             --------                 --------->At4g35610                                                  ----------->GT1             --------->ANAC58                                                 --------->CCA1(2)             --------->ANAC58                            <----------DOF2     --------->ARR14(2)     -         --------->ZAT6                              <-----------GT1         <---------ARR14(2)    <-  <---------ANAC46 ------->GAMYB               <---------TOE2(3)   <---------YAB1 <---------TOE2(3)--   ttcttcgtgtttcactagcaactgaatcgttttcatcgaattggttttagaggttttatcttttgcattcttatttgcagatttgagattgtgaaaaaaa  15244100                                                                           <------MYB83                                                                           ----------->GT1                                                                           <------MYB46(1)                                                                          --------->MYB111(1)                                                        <---------ARR14(2)<---------AtMYB61                                              <---------ANAC58            <---------MYB46(3)                                              <---------ANAC46            --------->MYB111(2)                                              <---------ANAC58            <---------DEAR3(1)                                              <---------bZIP60(2)         --------->MYB55(2)                                              <---------O2            <---------TOE2(3)                                             <-----------------------TaNAC69(2)                                            --------->MYB52(1)      ---------->DOF2                                          <---------MYB52(2)       <---------WRKY12   <---------YAB1                        --------->ANAC55(2)     --------->LBD16 <---------ICU4                --------->At4g35610      --------->ARR14(2)--------->MYB46(2) ->AHL20(2) <----------DOF2    <---------At4g35610     <------ZmHOX2a(1) <--------P -------->ICU4         <---------CCA1(2) --------->ANAC58        <-----------HVH21                  - --------ANAC55(2)   --------->YAB1      <---------ANAC55(2)    <---------ANAC46<---------YAB1      - ------->ANAC55(2)  <-------TEIL         --------->ANAC58       <---------ANAC55(2)            ------   tacttattagtctccttttacattcatatattcagctaatatcaagtaacgtggaaaggatttgttccgtcaaaggttggtgattatacagagactgagt  15244200  Previous    Next  AGI:  At4g31410.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G24740.2); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G24740.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62770.1); contains InterPro domain Protein of unknown function DUF1644 (InterPro:IPR012866) Range:  from: 15243729    to: 15245844    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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