Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------ANAC46                                                             <---------ANAC58         --------->ATHB12                                      --------->ARR11(3)     <---------ANAC58         <------ZmHOX2a(1)                                      <---------AHL20(1)--------->ATHB12       ------>MYB46(1)                                  <---------YAB1      <---------WOX13(1)       ------>MYB83                                --------->YAB1  >>>>>>>>>CBP60g              --------->TOE1(2) <----- -----GT1   --------->REM1(1)  <---------YAB1   >>>>>>>>>SARD1      --------->YAB1---------->DOF2  <-   attttagcattactacatccaaatacttcaactatcatcatatattggaaatttggattgatggcttgagtcataaaaacctacaaaaggattggacgat  15221400                          <---------ZAT14                          --------->At4g35610                          <------NtERF2                   --------->CCA1(2)                          --------->LBD16                 --------->GLK1(1)                          <---------At4g35610            <---------ARR14(2)          --------->RVE1(1)                              --------->ARR11(3)          ------->TEIL         <---------ARR11(3)                              --------->ARR14(2)   <----------DOF2         --------->ARR11(3)   ----------->HVH21         <------ZmHOX2a(1)     <---------DAG2   ----------->GT1       --------->ANAC46     --------->DAG2               <-----------GT1 ----ARR14(2)           <---------LBD16      ---------->DOF2       <----------DOF2--------->ANAC55(2) ---------DOF2   <---------YAB1         ----------->GT1----------->GT1<---------CCA1(2)--------->YAB1   acttttagtaaaatctcttaaaattgtccgcagtgaccaaaatgctaaaaagctagaaggatatacagacttttatcttactttatgtatcagaaaatca  15221500                   --------->DAG2                  ---------->DOF2               --------->YAB1                                                   ----------->GT1              <---------YAB1                             <---------ATHB12       <------MYB46(1)           --------->ICU4                         --------->ANAC58              <------MYB83         <---------AHL20(2)                       <----------ID1               --------->MYB59         <---------ICU4                           --------->ANAC58          <---------REM1(1)        --------->AHL20(2)                       --------->DAG2            <---------TOE2(3)   --------->TOE2(3)                            ---------->DOF2     --------->YAB1    ---------->DOF2   atatttcttaataaatatgataaagtgtttcagtttattttgagtttagaaaaagccaaatgaattggaatcaaaataatgtaggtaaaaaagagaagtg  15221600                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                            <--------                                                                                          <----------                                                                                         --------->ALFIN1                                                                                   --------->ALFIN1                                                                                  ------->MYC2                                                                                  ------->PIF5                                                                                  <-------MYC4                                                                                  <-------PIF4                                                                                  ------->PIF4                                                                                  ------->MYC4                                                                                  <-------MYC3                                                                                  ------->MYC3            <---------ICU4                                                        <-------MYC2           <---------ATHB12      <--------P                                       <-------PIF5       <---------AHL20(2)       --------->At5g28300                              <---------TGA1a       --------->AHL20(2)      ----------->GT1                                   --------->TGA1a  --------->AHL20(2)        --------->MYB52(1)                  <---------ALFIN1 <---------O2   -----  <---------AHL20(2)     --------->YAB1      <---------ANAC58   --------->AtMYB61==================== --------->YAB1         <---------ATHB12     <---------ANAC58  --------->ANAC46  --------->O2 <------ --------->AHL20(2)   --------->WOX13(1)   <---------ANAC46  --------->ANAC46   ------------>OsbHLH66   gaattaaaataaaatcattctatccaatcaaaacggtaagtagttgtgcgttttagaggcaaaacaccacagcgtttcgaagcacgtggatgtgtcgtgt  15221700   <---------At4g35610   --------->At4g35610                                                 --------->YAB1 -ANAC58                                                             --------->AHL20(2) -O2                                                               <----------DOF2 -bZIP60(2)                                                   <---------WRKY38(1) -ANAC58                               --------->YAB1         <---------WRKY12 -ANAC46                               <---------ICU4        --------->WRKY18(1)    ----------->GT1 -TGA1a    <---------ZAT18            <---------YAB1        <-----------HVH21       <------MYB46(1) -HVH21    --------->ZAT14       --------->ANAC55(2)       ------->GAMYB            <------MYB83 ------>HVH21  --------->ATHB12  <---------ANAC55(2)    --------->MYB52(1)<-----------GT1 =bZIP_bZIP<---------ZAT14 <---------TOE2(3)     ------------>CBF --------->TOE2(3)<---------TOE1(2) ---ANAC46 --------->ZAT18--------->YAB1      ----------->RAV1(2) <---------DAG2  <--------P        <   gatacagcagtagcgcactattgggcattgagaatacataatcataacccctgcaatctaacggtcaaccttttaataacccttgtaggttaaatctcta  15221800                                 --------->ANAC58                                   --------->ANAC58                                 --------->ANAC58                          ---------->DOF2                          --------->ANAC58                         ----------->GT1  --------->ANAC58              <---------DAG2    --------->DAG2    ---------->TaMYB80     ---------->DOF2              <----------DOF2  ---------->DOF2   *TSS             --------->DAG2   --------->SPL7           <-----------GT1----------->GT1    --------->DAG2      ---------->DOF2 --------->At5g28300 ---------MYB52(1)        --------->ANAC58 ---------->DOF2 ----------->RAV1(1)  ----------->GT1   ccgtttattcgaattacttttccaaggtaagaaaaaagcaaacacaaaagggaatatcaaacaacaaaaaagtaagaaagagcggtaagacagagacgga  15221900                                                     --------->ATERF1(1)                                                     <------NtERF2                                                     --------->RAP2.3(1)                                                   --------->ATERF1(2)                                                   <---------ATERF1(2)                                                   --------->DEAR3(1)                                            >>>>>>>>>SPL5                                            >>>>>>>>>SPL4                                            --------->SPL7                                            >>>>>>>>>SPL1                                      ------------------>SPL14                                    <---------ANAC58------>NtERF2                              ------                                    <---------ANAC58--------->LBD16                           <------                                   <---------At4g35610--------->DEAR3(1)                     --------                       --------->ANAC58   <---------SPL1(2)                         --------->DAG2                       --------->ANAC58   <---------SPL7                          ---------->DOF2<---               ----------->GT1 <-----------RAV1(1)<---------RAP2.6(2)  <---------At4g35610   --------    <------ZmHOX2a(1)  --------->ANAC46 --------------->AtSPL3         --------->At4g35610<---------ARR14(2)   gaagaaggagaagaagattgttaagacgaaaccctgttgctgtccgtacaatgccgccgaagaagagtaaggcagatggagaagaaaaggcgaaaccttt  15222000                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                  ---                                                                                                  ---                                                                                                  <--                                                                                       --------->ANAC46                                                                                       --------->ANAC58                                                                                       --------->ANAC58                                                                                      ------>ZmHOX2a(2)        <---------ANAC58                                                              --------->MYB46(3)        <---------ANAC58                                                             <------ZmHOX2a(2)        <---------ANAC46                                                            --------->ARR14(2)       <------NtERF2                                                                <---------ARR14(2)     <---------DEAR3(1)                                                        --------->At4g35610<-- --->DOF5.7(2)                                                                 --------->ZAT2-------- ----DOF2  <---------ANAC46                                                  <---------RAP2.6(2) <--- ->TOE1(3)<------NtERF2 <---------LBD16                                   --------->DAG2------>NtERF2 ------DOF5.7(2)       <---------ANAC46                                  ---------->DOF2--------->LBD16 ->TOE2(3)--------->ATERF1(1)                                   --------->MYB52(1)----------->ARR10--   aacgacgttggcgtcgtctagagtgactcggagcatggacagtcgaactcgaagtcagactcaacaaaacggtgctaaagcggctggatccgccactaag  15222100   <------NtERF2  ------>NtERF2 --------->DEAR3(1) <---------DEAR3(1) ----------->HVH21 ------NtERF2 -------->RAP2.3(1) -------->ATERF1(1) --------RAP2.3(1) ------->LBD16 --------ATERF1(1) --------DEAR4(2) ------>ATERF1(2) ------>DEAR3(1) -------ATERF1(2) -------DEAR3(1) -->DOF2                                                                                         <--- ------LBD16             <---------GLK1(1)                 ---------->DOF2           <-----------RAV1(2) ---->NtERF2        <------ZmHOX2a(1)            ----------------->AGL1 <------ZmHOX2a(1) <------ZmHOX2a(1)   ccggcgacgaagaaggctaagaggaagaattcagcgattgagactgggagagccaagaagggaaagaaggaagaggaagttgaagagccagaggaagccg  15222200                                                                     --------->YAB1                                           <---------HSFB2a(2)  --------->ZAT14        <-------GAMYB                  --------->TOE1(2)        <---------ZAT14 <---------ANAC58       <---------MYB46(3)           --------->ZAT18         <---------HSFB2a(2) <---------ANAC58      <---------AtMYB61             <---------ARR14(2)      --------->HSFB2a(2) <---------ANAC46     <------ZmHOX2a(1)             <------ZmHOX2a(1)     <---------YAB1    <---------ICU4   --------->ALFIN1           --------->ALFIN1       <---------GLK1(2)    --------->ICU4  <------ZmHOX2a(1)         <---------MYB46(3)     <---------YAB1    ----------->GT1 ------MYB52(1)         <-----------RAV1(2)--------->HSFB2a(2) <<<<<<<<<<<<<<<<<LFY                <-   ttgaggaggaggttgagaaggaagagccagaggttgaggaccctacgagaaccaagattgttatagaacactggtaatttttgcgtaaatgttttcgatt  15222300  Previous    Next  AGI:  At4g31360.1    Description:  selenium binding. similar to selenium binding [Arabidopsis thaliana] (TAIR:AT2G24440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43944.1); contains InterPro domain SelT/selW/selH selenoprotein; (InterPro:IPR011893) Range:  from: 15221849    to: 15223633    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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