Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        <---------AHL20(2)                                      --------->AHL20(2)                                    --------->TOE2(3)                                    <----------DOF2                       --------->ARR11(3)                       --------->AHL20(1)                                                          <-              <---------ANAC58   --------->ARR11(3)                                               <--              <---------ANAC46  <---------GLK1(1)                                        <---------ICU4              <---------ANAC55(1)<---------ARR11(3)                      <----------DOF2 --------->ATHB51    <-----------GT1    <---------AHL20(1)                  <----------DOF2   <---------YAB1     ----- --AHL20(2)   <---------ANAC58  --------->GLK1(1)      <----------DOF2 <---------YAB1 --------->YAB1   tgtatttttctattttacgtggatatatattgcgatatctttaatttcattcgaactctttcttttgcaacttatctttatgcttaattcataatttctt  15209600                               <-----------GT1                         <----------DOF2    <----------DOF2 --------ICU4         <---------YAB1     <-----------GT1                                        ----- -------YAB1        -------->ATHB1 ------>ZmHOX2a(1)                             <-----------GT1<---- ---->YAB1         --------->ICU4 --------->TOE2(3)        ------->TEIL<----------DOF2 ---------->DOF2   ataattccatcaaactctagaattattctttattttcctcaaattactttcttacaaaatgaactcttggtctctttaaaaattcaccagaaagttttag  15209700                                                     ------------>CBF                                             --------------->AtSPL8             --------->ANAC46--------->ICU4  <---------------AtSPL8  --------->TOE2(3)       ----------->GT1  <------------CBF  --------->TOE1(3) --------->ALFIN1      --------->CCA1(2)              <-------TEIL ---->At4g35610    <-------MYC3          <---------ARR11(3)             --------->CCA1(2)   --------- -----At4g35610    ------->MYC3          --------->ARR11(3)         --------------->AGL15 -----------   ctaaccttgaaaaacacaaaacgtggaagagataattaagagagatattggtactaacaattcatcttaactagatacagtagtcgagaggccaacaaca  15209800                                                        <---------TOE1(3)                                                        <---------TOE2(3)                                                       <---------DOF5.7(2)                                                     --------->DOF5.7(2)                                   ------->TEIL     <----------DOF2                                  <---------CCA1(2) <---------DAG2                       ---------->DOF2      ---------->DOF2                     <---------ANAC58 >MYB46(3)           --------->ANAC58    --------->TOE2(3)           <---------ALFIN1       <-------- >RAV1(1)            --------->ANAC58    --------->YAB1<-----------GT1          <---------ANAC58  <--   agtcttgggactcgatttgagtcaagaaagaagcatgtatctatcttaaaggcactttaacgtttctacttccacttgattttcttgtttataaacatcg  15209900                                                                  --------->MYB46(3)                                                           ------->TEIL                         <-----------HVH21                 --------->SPL7    --------->DAG2                  --------->ANAC58                       <---------SPL7    ---------->DOF2                  --------->ANAC58                      <---------ANAC58--------->ANAC58                  --------->ANAC46                      <---------ANAC58--------->ANAC58                 ------->GAMYB                   <---------AHL20(2) --------->ANAC58         --------    <---------ALFIN1  ---------->DOF2            --------->AHL20(2) --------->ANAC58        <-------- -ICU4     ------>ZmHOX2a(1)                     --------->AHL20(1)------->GAMYB            <-------- -------ALFIN1  <---------ALFIN1              --------->YAB1    --------->MYB52(1)  --------->YAB1   ccacttccacttcctctaacaccccaaagtcacagcaacttggtgcaaaaataaaatggcgaaccccaacgagcaagaaaaggcaatgagaacgaaggtt  15210000                                            <------ZmHOX2a(2)                                           <---------ARR11(3)                                           --------->ARR14(2)                                           --------->AGP1                                   <---------ICU4                               <---------YAB1                                                   -----                               --------->ICU4<-------TEIL                                       -----                             --------->CCA1(2)                       --------->ZAT6--------->At4g35610                            --------->ARR11(1)            --------->DOF5.7(2)      <---------At4g35610    ---------->DOF2         <---------ARR11(3)            --------->At5g28300 <----------DOF2-------- --->GT1<---------GLK1(2)   <---------ARR14(2)           ----------->GT1   --------->LBD16   ------>NtERF2 -TOE2(2)                   --------->ARR14(2)        --------->MYB52(1)   ------>NtERF2   <---------LBD16 -TOE2(3) <-------TEIL    ----------->ARR10<---------ARR14(2)     --------->WOX13(1)    ------->TEIL   aaatggaaaagattcactgagatggaagtagatatgattatgccagatccatctccaaacggtaacatctatcactccgcctttgagatgaatgccgcaa  15210100                      --------->ANAC58           <-----------HVH21       <-----------GT1--------->ANAC58                   <----------DOF2  ----------->GT1   ---------->DOF2               --------->ARR11(3)                        <-------- ---->ANAC58      --------->AtMYB61     <---------MYB52(1)                                  --------- ---->ANAC58--------->PCF2             <-------GAMYB  <---------YAB1  <---------WRKY12     <---------KAN4(2) ->LBD16  ------->GAMYB     <---------ARR11(3)  <---------ZAT6   <---------GLK1(2) <----------DOF2  -   gaaatggtttaactgtcccaccaaaagcaagagctatcttcggttacttagtgatcatgctttacaagaatgtcaacgaatcaaactttagagaattttc  15210200                                                    --------->ARR11(3)                                                    <-----------ARR10                                 <---------YAB1     <---------ARR11(3) --------->ALFIN1                               --------->YAB1      <---------CCA1(2) <---------ANAC46          ---------->DOF2<-----------HVH21 --------->At4g35610       <---------bZIP60(2) -HSFB2a(1)             <-----------RAV1(1)<---------At4g35610     --------->YAB1 >HSFB2a(1)        <---------ANAC58<---------ARR11(3)             <---------ATHB12    --------->At4g35610 -------->MYB46(3) <---------ANAC58--------->ARR11(3)      <---------ZAT6   <---------At4g35610   taacaagcgtttcaaagcacttcgtgctgtcgctcatgatatttcagatggacatatctcagtgttcaatgatgtggaagatgctatctgctatcgaaac  15210300                         --------->DAG2                        ---------->DOF2                       <---------MYB52(1)                      --------->LBD16                     --------->ANAC55(2)                     <---------ANAC55(2)                     <---------ANAC46                    =================================HOX2a_HOX2a                    ------>ZmHOX2a(2)                    <-------TEIL                   ==================================HOX2a_HOX2a                   <------ZmHOX2a(2)                  --------->AGP1                  --------->ARR14(2)                  <---------GLK1(2)           ------>ZmHOX2a(1)                 --------->At4g35610   <---------At4g35610                                     <-----                ----------->ARR10      --------->At4g35610                                    <------             <-----------HVH21         <---------ZAT14          >>>>>>>>>>>>>>>>>LFY      --------->TOE2(3)           --------->MYB46(3)     <---------YAB1             <---------KAN4(2)     <---------ZAT6 <---------TOE1(2)<---------ARR14(2)   --------->ZAT14  ---------->DOF2<---------MYB52(1)<---------ZAT6   tcgtatggtcagaaccatcagatccgtaaagctgttctgagtgctgtcctcggtagcaaaaagaatgaccactgttatttctctagtgttagtcttaatg  15210400                                                                  <---------GLK1(2)                                                                <---------YAB1                                                   --------->GLK1(2)                                          <---------HSFB2a(2)   ------>ZmHOX2a(1)            <---------ANAC58   --------->ARR11(3)  --------->ARR14(3)                   ------>ZmHOX2a(1)            <---------ANAC46   <---------ARR14(2)  <---------ARR14(3)                   --------->LBD16         <----------DOF2       <---------ARR11(3)  --------->ARR11(3)                 ----------->RAV1(2)       ----------------->AGL1  --------->ARR14(2)  <---------ARR11(3)           ---------->DOF2 ------RAV1(1)        <---------O2   <-----------RAV1(1)    <-----------GT1   <---------HSFB2a(2)   - ---TOE2(3) <---------ANAC58  <------ZmHOX2a(1)    <---------ARR14(2)  ----------->RAV1(2)        ---   ttgctaaattcctttcttggacagacatggcaggatattatgttgtcgaagaaaatcttgtttatcctgattcccctgttctcaaagctcctgagttagc  15210500  Previous    Next  AGI:  At4g31340.1    Description:  myosin heavy chain-related. similar to DNA repair ATPase-related [Arabidopsis thaliana] (TAIR:AT2G24420.1); similar to DNA repair ATPase-related [Arabidopsis thaliana] (TAIR:AT2G24420.2); similar to unknown [Populus trichocarpa] (GB:ABK94806.1); similar to unknown [Populus trichocarpa] (GB:ABK95933.1); contains domain Spectrin repeat (SSF46966); contains domain Apolipoprotein (SSF47162) Range:  from: 15205486    to: 15209607    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g31350.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G19160.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43948.1); contains InterPro domain Protein of unknown function DUF266, plant (InterPro:IPR004949) Range:  from: 15209956    to: 15216895    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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