Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->ANAC46               --------->ANAC58               --------->ANAC58               --------->ANAC55(2)               <---------ANAC55(2)              <-------TEIL          ----------->ARR10       <-----------HVH21   <---------ANAC58                                                                      --------->CCA1(2)   <---------ANAC58                                                                     <---------ARR11(3)   <---------ANAC46                                                                ------>ZmHOX2a(1)  --------->ATHB12                                                                --------->TOE2(3) ----ALFIN1 --------->ARR14(2)                         <---------HSFB2a(2)     --------->ARR14(2) ---ZAT14 <---------------AtSPL3        --------->ARR11(3)                     <---------ARR14(2) ---ZAT18 --------->MYB59               <---------ARR11(3)                 --------->ANAC46 -->ZAT14 <---------------AtSPL8      <---------MYB52(1)                   --------->ANAC58   ------- -->ZAT18<-----------RAV1(2)      ------>ZmHOX2a(1)    --------->HSFB2a(2) --------->ANAC58   <------   ctcttgagtggtcaggtacgcatcactcttgttgtcctccattatcttcaaaatgctctcgaacacagcaacttcacaaggaatcctcaagataccagct  15194200                                      <-------MYC2                                      ------->MYC3                                      <-------MYC3                                 ------->GAMYB                                --------->MYB46(3)                               ---------->DOF2                              ----------->RAV1(1)                              --------->MYB52(1)                           --------->ANAC46                           --------->ANAC55(1)                       <------MYB83                           <---------ANAC55(2)                       <------MYB46(1)                           --------->ANAC55(2)           <---------TOE1(3)        <----------DOF2                           --------->ANAC58              ----------->ARR10    <---------CCA1(2)                           --------->ANAC58          <------NtERF2 <---------MYB52(1)              --                       <-----------HVH21            <---------MYB46(3)  --------->ARR11(3)        <--                     --------->At4g35610         <------MYB83     <-------GAMYB------->TEIL      ----                     <---------At4g35610  ---------->DOF2<---------TOE2(3)<---------ANAC46   ------>ZmHOX2a(1) -->ZAT2          <---------At4g35610 ------->MYC2 <---------RAP2.6(2) <---------CCA1(2)  ------>ZmHOX2a(1) ---ZAT2      ----------------------->TaNAC69(2) <------MYB46(1) <-----------RAV1(1)  <-----------GT1   tgttcaaacccaaactcttcttctgcttcacgcaacagcacatggaaagcttggtggctaaggtactctgttggtatcttgtatcttttctcctccttcc  15194300                                               <------ZmHOX2a(1)                                             <---------TOE1(3)        <---------At4g35610                  <---------TOE2(3)        <---------ZAT2           <---------MYB52(1)        --------->At4g35610    <-----------RAV1(1)   <---------ZAT18                      <---------ALFIN1 ---->NtERF2                   <---------MYB46(3)    --------->ZAT14            <---------ANAC58 -------ALFIN1          <------ZmHOX2a(1) ----------->HVH21     <---------GLK1(2)   <---------ALFIN1 ----->MYB46(3)    <----------DOF2  <---------ANAC46<---------ZAT6              <---------ANAC58<----   ccaccgagacagctaagtagcctttaggaatagctgttgtgtctgtgaaggatagtgttctcttcagaaacttgatgctcttgcttccacttccacttcc  15194400                                                                       <---------ANAC46          <---                                                                       <---------ANAC58          ----                                           <---------At4g35610   <-----------RAV1(1)            -----                                       <-----------HVH21 ------>ZmHOX2a(2)                   <-------                                    <---------At4g35610--------->ARR11(3)          <---------ANAC46                                <---------REM1(1)      <---------ARR11(3)          <---------ANAC58                     <---------At4g35610   --------->At4g35610   <---------MYB46(3)<---------ANAC58        <---------MYB46(3)      <-----------RAV1(1)    --------->ARR14(2)          <---------ANAC55(1)     <-----------RAV1(1)  <-----------RAV1(1)          <---------ARR14(2)          <---------ANAC55(2) -----ALFIN1 <---------TOE2(3)  <---------MYB46(3)   --------->ETT(2)  <---------ANAC58      <-------   acttccattgttgttgatgttgatgctgatgttgttgttgctgtcatctacgttgtcgatcttgttgttgttggcttgttttgatgcgtgtgcaactttt  15194500                  <---------REM1(1)               <-----------RAV1(1)              ------>ZmHOX2a(2)            --------->ARR14(2)            --------->GLK1(2)            <---------ARR11(3)            <---------AGP1      ------>ZmHOX2a(2)            <---------ARR14(2) <------ZmHOX2a(2)     <---------ANAC58     --------->MYB52(1)                               ---------->DOF2     <---------ANAC58  --------->TOE1(3)                              --------->ARR14(2) --------GT1--------->ARR11(3)--------->ARR11(3)                      <---------ARR14(2) ----->ANAC46<------ZmHOX2a(2)<---------ARR11(3)                     <------NtERF2          --------- ----->ID1 ============================HOX2a_HOX2a                  --------->LBD16     >>>>>>>>>TBF1 --DAG2    <------ZmHOX2a(1) ------->GAMYB <---------YAB1          <---------ANAC46  >>>>>>>>>TBF1 ---DOF2   ===========================HOX2a_HOX2a                 <---------LBD16 >>>>>>>>>TBF1   cgccatttcttgaggatctgttgaagcttaacgatctctctgattttgtttgacttcttggcctccatggcggaaactaaagaagaagaagaagaaactg  15194600                                                                                    --------->At4g35610                                                                                    <---------At4g35610                                                                                   --------->ICU4                                                                                 --------->At4g35610                                                                                 <---------At4g35610                                                                                --------->ALFIN1                               <---------ANAC46  <------MYB46(1)      --------->CCA1(2)                             <---------ANAC46    <------MYB83         <-----------TBP             <--                           <---------ZAT14      <---------MYB46(3)   <---------ARR11(3)           --- >GLK1(2)                  <-------GAMYB       <---------ANAC46      --------->ARR11(3)           ---   gctctgttcttggtgtttctatctctgtgtgttgtgtaatggagacatggtgggtttttggagattagggagatatatagaggtgctgatgacatttggg  15194700              <-----------TBP            --------->AHL20(2)            <---------AHL20(2)           --------->AHL20(2)                                  ------->MYC3           <---------AHL20(2)                                  <-------MYC3           <---------AHL20(1)                  <---------ARR11(3)       --------->AHL20(2)                      --------->AHL20(1)       <---------AHL20(2)                      --------->ARR11(3)       <---------YAB1                          <---------AHL20(1)  <----------DOF2 <-----------GT1 -------ARR14(2)                    <---------AHL20(2)    -------->P  <---------YAB1<---------------- ------>ARR14(2)                   <---------AHL20(2)    <-----------GT1           <<<<<<<<<GT-1 ------>GLK1(2)<---------AHL20(2)  --------->AHL20(2)  <---------MYB52(2)     <---------YAB1   <-----   aatcttgttttaattaatttatagattagttttgaaattaaatgtctaaaatattcgactaaccatatgcttttgattttcttattaaccaagttggaaa  15194800                                                                                                   --                                                                                            <--------                                                                                            ---------                                                                                    <---------ANAC58                                                            --------->ICU4          <---------ANAC58                          <-----------GT1          <---------YAB1               <---------GLK1(1)  --     <---------AHL20(2)   <---------WRKY18(1)   <---------MYB52(1)          --------->HSFB2a(2)   <-- -AGL1           --------->ARR11(3)             --------->ICU4           <----------DOF2    <-------- ----GLK1(1)  <-----------GT1                 ----------->GT1         <---------YAB1<---------ANAC46   cctctagttaatggtattacatcttgtttgaccttctcttaacttaagtcgttattaaggccatgtttgtttatgcttttggaattgcgtttcaaattcg  15194900        --------->ZAT6   --------->ANAC55(2)   <---------ANAC55(2) ------->ANAC58                    --------->AHL20(1) -ARR14(2)                         --------->AHL20(2)                                               < >ARR14(2)                         <---------AHL20(2)   --------->YAB1          --------->ICU4      - ------->ANAC58      <-----------GT1          --------->AHL20(2)              ---------->DOF2   <---- -------TOE1(2) <---------YAB1     <---------AHL20(1)<----------DOF2     ---------->DOF2  --------->AHL20(2) -GLK1(2)  <----------DOF2--------->ANAC46    <---------AHL20(2)    ---------->DOF2       <---------AHL20(2)   caagtacttaacacttttgttattgacaacaccacaataaattcagatttatattctttgataacaaaaaaaaagaaaagaaaagatgagatttatattt  15195000                                                          --------->AHL20(2)                                                          <---------ARR11(3)                                                          --------->AHL20(1)               <---------YAB1                                            <---------AHL20(1)                         --------->ARR11(3)                                            --------->AHL20(1)    <---------AHL20(2)   <---------GLK1(2)       <-----------HVH21                    --------->ARR11(3)  <---------YAB1         <---------ARR11(3)      <----------DOF2                    <---------AHL20(2)    <---------AHL20(1)    ----------->ARR10 <-----------GT1                 ----------->GT1          <---------AHL20(1)  --------->YAB1 ---------ZAT18              --------->ICU4 <---------AHL20(2) <---------AHL20(2)    <---------TOE2(3) -------->ZAT14         ----------->GT1  --------->AHL20(1)  <---------AHL20(2) ------>ZmHOX2a(1)<--- -----AHL20(2)   <---------AHL20(2)      --------->AHL20(2)  <---------YAB1 --------->GLK1(2)    ----   agtttactctttcagccattttatcgtcgtaaaaattgtaaaataaaatattgaatgcaaaatattatttttatgtagaatcctaataagattttcattc  15195100  Previous    Next  AGI:  At4g31320.1    Description:  auxin-responsive protein, putative / small auxin up RNA (SAUR_C). similar to auxin-responsive protein, putative / small auxin up RNA (SAUR_D) [Arabidopsis thaliana] (TAIR:AT2G24400.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62212.1); contains InterPro domain Auxin responsive SAUR protein (InterPro:IPR003676) Range:  from: 15193999    to: 15194568    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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