Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     ------->GAMYB                                                                                ------>NtERF2                                                                                --------->MYB52(1)                                                                            --------->ANAC58                                                 <---------WRKY12           --------->ANAC58                                                 --------->ZAT14       --------->ICU4         <------                                                 <---------ZAT14     ---------->DOF2     --------->ANAC58                               <---------At5g28300                ----------->GT1 --------->ANAC46                   --------->LBD16       ----------->HVH21       --------->ANAC58 --------->ANAC58   <---------At4g35610        <-----------GT1 --------->LBD16    --------->ANAC58 --------->ANAC58 ------>TOE1(3)   --------->LBD16    <---------CCA1(2)       --------->ANAC46  --------->DEAR3(1)<--- -->TEIL         <---------LBD16 --------->DEAR3(1)         <---------LBD16<-------TEIL  --------->ANAC58   ccttcagaagagccttcatcccggagaacaaatcaccgtctatctcaccggtaaactggttatgcgcaaggtaaagatgcgccaacgaaacaagcccgtc  15181400             <----------DOF2            --------->HSFB2a(1)            --------->ARR14(2)            ------>ZmHOX2a(2)              <---------ARR14(2)            <---------HSFB2a(1)        <---------At4g35610          --------->ARR14(2)         --------->DAG2          <---------ARR14(2)   --------->ANAC58          --------->ARR11(3)   <---------ANAC55(2)          <---------ARR11(3)   <---------ANAC46    --------->ANAC46           --------->ANAC55(2)                                           --------    --------->O2               --------->ANAC58          <---------At4g35610               <---------LBD16    <---------O2              <-----------------------TaNAC69(2) ------->TEIL         <---------At4g35610 -----HVH21<------ZmHOX2a(2)--------->ARR14(2)           --------->LBD16           ---------->DOF2 ------DEAR3(2)    --------->LBD16  ---------->DOF2      <---------LBD16   <----------DOF2--------->MYB52(1)   gattccacgagggatctttccctcgaaatggttacgcataaagctgatactcttgagaccgcggatggacccgagcgcttgaacatcaagctcaccggag  15181500                                                                          <---------DAG2                                                                          <----------DOF2                                                         --------------->AGL15                                    <---------MYB52(1)   <---------------AGL15                                 <------NtERF2          ----------------->AG                          --------->MYB52(1)            ----------------->AGL1                         --------->ARR14(2) --------->ANAC46  <---------ANAC58            <---------REM1(2)   ------>NtERF2 --------->ZAT14 <---------ANAC58           --------->HSFB2a(2) --------->ARR14(2)       <-----------------AGL2   <---------LBD16 <-------TEIL            <---------ARR14(2) --------->bZIP60(2)  <-----------HVH21 --------->LBD16 ->LBD16   <---------HSFB2a(2) <---------ARR14(2)    <----------DOF2     --------->TOE2(3)   aggctcatgttctctagacggagagcgaaaacggagccgtttgaacacatcactcctttccatttcgagtcacttcctttatcaccggagcaaggaggct  15181600                                                                               --------->LBD16                           <---------ANAC46                                   <---------ANAC46                           <---------ANAC58                                   --------->DEAR3(1)                           <---------ANAC58                                  <------NtERF2                          <------NtERF2                                     ------>NtERF2                      --------->ZAT2       <---------ANAC58                <---------DEAR3(1)                      <---------ZAT2  --------->At4g35610                  --------->DEAR3(1)                      <---------At4g35610  <---------ANAC58               --------->ATERF1(1)                      --------->At4g35610  <---------ANAC46              <---------ATERF1(1)                    --------->ZAT18   <---------At4g35610                <-----------HVH21               --------->DEAR3(1)     --------->CCA1(2)                 --------->DEAR3(1)              --------->ANAC46   --------->ANAC46                    <---------ALFIN1  ==============           <---------MYB55(2)  <---------DOF5.7(2)               --------->At4g35610   <------ZmHOX2a(1)           --------->MYB46(3)--------->DOF5.7(2)              --------->At4g35610   --------->CCA1(2)   caccagagtcccatccaccgagcgagctggcgttcacgagagatgacttgaacttcaatagagcatcagcatcaccgtcgccgtagataggagaaacgaa  15181700                              ------>ZmHOX2a(2)                       <---------ZAT14           <-----------HVH21                       <---------ARR14(2)     --------->ANAC55(2)                       --------->ARR14(2)  <---------REM1(2)          --------->YAB1             --------->MYB52(1)--------->HSFB2a(2)       ----------->GT1        <------ZmHOX2a(2)     <---------LBD16<---------LBD16    --------->YAB1 ==============HOX2a_HOX2a   <------ZmHOX2a(2)<---------ANAC55(2) <---------AHL20(2)        <------ZmHOX2a(1)   gagcaagacgatcaataacagagagtatacgatcgggaatttgtcatcacgggtcatttcggtgaaaaataatcgaaatttttgggatttgagaggaaga  15181800                                                                          <------NtERF2                                 <---------RAP2.6(2)                     --------->LBD16                                 <---------DEAR3(1)                     <---------HSFB2a(2)                                --------->RAP2.6(3)                     --------->ATERF1(2)    <-----                                <---------ORA47(1)                      <---------ATERF1(2)    ------                          <---------MYB46(3)                            --------->HSFB2a(2)  <-------                       ------->TEIL <---------GLK1(2)                   --------->ETT(1)   <---------DEAR3(1)                       --------->ARR14(2)                              <---------LBD16     <---------RAP2.6(2)                       <---------ARR14(2)                              ----------------->AGL1--------                    <---------ANAC55(2)                        <------ZmHOX2a(1)          --------->RAP2.6(3)           <-----------HVH21  <---------SPL7      --------->WOX13(1)  --------->MYB52(1) <------ZmHOX2a(1)          --------->ANAC46<-----------RAV1(1)    <---------AHL20(2)<---------ANAC58  ---------->DOF2    <-----------TBP --------->ANAC55(2)          --------->AHL20(2)<---------ANAC58<---------YAB1   agagagatttatacgtcggaagacgtatttgttggacggcttctctatgaattaatcaaatgagaggagacttgccggaagaagtatgaaaggacggctg  15181900                          ------------>CBF                         --------->ANAC58                         --------->ANAC58                   ---------->DOF2                  <---------WRKY38(1)          <---------At4g35610          --------->At4g35610                                                                  ------     ----------->HVH21   --------->ANAC46       --------->ALFIN1                   --------->YAB1    <---------WOX13(1)  --------->ZAT18        <-------MYC3                        --------->ATHB12 < ----MYB46(3)     <---------WRKY12             ------->MYC3                       <---------YAB1    < ----->HVH21      <---------WRKY45            <---------ANAC46       <---------ANAC58          <----- --At4g35610    <-----------HVH21          --------->MYB46(3)        <---------ANAC58          <----- ->At4g35610---------->DOF2              ------>NtERF2       <---------ANAC46     --------->ICU4<----   atggtgaatgacagcaaaggtcaaagcacacaatcgttttcgccaacaacgtggaaccaagtactgtgtaagcttgtccatggtatgattactcatagat  15182000                           --------->AHL20(2)           --------->TOE2(3)    --------->AHL20(2)     <-----------TBP   <---------YAB1  <---------ANAC55(1) --->ARR11(3)      <---------ANAC55(2)              --------->TOE2(3) ---------AHL20(2) <---------ANAC46                --------->MYB46(3) ---------YAB1     <---------ANAC58      <---------GLK1(2) ----ARR11(3)      <---------ANAC58      --------->ARR11(3)                                  -------- ----GLK1(2)       --------->ANAC55(2)   <---------ARR11(3)      <---------TOE2(3) <---------ANAC58 -----RVE1(1) --------->ATHB12  --------------->AtSPL8     <---------YAB1          <---------ANAC58   tttttattatataccttgattacgtgtgtttatatatgtactagatttttgtaaccaaaatatgattaagaaattcaaatgtattgcattccacattatt  15182100                                                --------->ANAC55(2)                                                --------->ANAC55(1)                                                --------->ANAC46                                                --------->ANAC58                                -----        <---------ICU4                       <---------ARR14(2)                             <--------       --------->ICU4                       --------->CCA1(2)                 <---------GLK1(2)------   --------->LBD16                         --------->AHL20(1)            <---------AtLEC2   ---------  --------->ANAC46                         <---------ARR11(3)            <---------ANAC46  --------->GLK1(1)  --------->ANAC58                         --------->ARR11(3)           <-------TEIL       <---------GLK1(1)  --------->ANAC58                        --------->AHL20(2)      <---------ZAT14         <---------ARR11(3) <---------LBD16            <---------AHL20(2)  --------->ANAC58  --------->ZAT14         --------->ARR11(3) ->AHL20(2)<-----------GT1 <---------AHL20(2)--------->ARR14(2)   <---------ZAT18   <---------YAB1   tatcgcgcaaatattactagttgctattttttatttagtctaaaatatatacgcaatccaaaacatagtgtagtttcatggattttcttatagatatcct  15182200                                                                                    --------->GLK1(1)                                                                                   --------->ARR14(2)                                                                                   <---------ARR14(2)                                                                               --------->ZAT14                                            ------>MYB83                       <---------ZAT14                                            --------->MYB52(1)                 --------->ZAT18                             <---------ARR11(3)                                <---------ZAT18         <---------AHL20(2)  --------->ARR11(3)                           ---------->DOF2  ----------->GT1       --------->AHL20(2)  ------>MYB46(1)          ------>ZmHOX2a(2) ->ZmHOX2a(1)       --------->ICU4  <---------HSFB2a(2)             <------ZmHOX2a(2) -ARR11(3)          ----------->GT1 --------->HSFB2a(2)            --------->ARR11(3) --->TOE2(3)<-----------RAV1(1) <----------DOF2                    <---------ARR11(3)    <----------DOF2 >ARR11(3) <---------TOE2(3)<---------CCA1(2)           --------->YAB1<----------DOF2    <-----------   tattttgttaatttatgttgtaatgtttatatatctttccataaccaaatggcctctatcagatttagcgatcttttaaagtgcagaaatgctttatttt  15182300  Previous    Next  AGI:  At4g31250.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G20190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43973.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Tyrosine protein kin Range:  from: 15178931    to: 15181757    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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