Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                ----------->GT1                           --------->DAG2                           ------------------------>ANAC81     --------->AHL20(2)           ----------->GT1--------->DAG2                       <---------AHL20(2) --------->CCA1(2)       <---------TOE2(3) ---------->DOF2                ----------->GT1          <---------ARR11(3)       <---------YAB1 --------->ANAC46                 --------->ANAC58          --------->ARR11(3) ---------MYB52(1)    --------->ANAC58                 --------->ANAC58      ---------->DOF2   <----- ------GAMYB          --------->ANAC58            <----------ID1    ----------->GT1     --------->TOE2(3)   cggttgattaagcttgtaaattccaagaaaaggggataaatgaaatcacatggggacaaggaaatataaatagaaaaaaaaaagatataaacttaaactt  15178700                                                       <-----------GT1                                                      --------->KAN4(2)                                                     <---------KAN4(1)                                                     --------->KAN4(1)                                               ---------->DOF2                                             ------>ZmHOX2a(1)                                            --------->TOE2(3)                                         --------->ARR11(3)                        --------->ARR11(3)                                         <---------ARR11(3)                  --------->ANAC58                                         --------->ARR14(2)                  --------->ANAC58     <--                            ----------->GT1 --------->TOE1(3)             *TSS------------>CBF    <--                          ---------->DOF2<---------ARR14(2)             <------MYB83 >>>>>>>>>RAP2.2-                      --------->ANAC58  --------->RVE1(1)               <------MYB46(1)    <---------                      --------->ANAC58  --------->CCA1(1)      <---------REM1(2)   <---------ARR11(3)                   ------------------------>ANAC81   <----------TaMYB80--------->MYB59   --------->ANAC58                 <----------ID1    --------->YAB1   ---------->TaMYB80 --------->MYB46(2)--------->ANAC58 -----DOF2    ---------->DOF2   --------->WOX13(1)  <---------KAN4(2)<---------MYB52(1)---------->DOF2   tattgaagtctctctcaaaagaacaagtaaaagtaaatcaaaatatcctcaaagaatataccatctacaaggttaggttacccaatatctaaagcaacaa  15178800                                        --------->ANAC46                                      --------->ZAT6                                                -                            <---------ANAC58                        --------->ANAC55(2)             <                            <---------ANAC58                        <---------ANAC55(2)         <----             <---------AHL20(2)  --------->TOE2(3)--------->DAG2    --------->ANAC46            <---- -------ANAC58   <---------AHL20(2)   <---------ALFIN1              --------->ANAC58       <--------- -------ANAC58  <---------AHL20(2)   <---------ZAT14  --------->ZAT18                <---------ARR11(3) ---------->GT1 --------->AHL20(2)   --------->ZAT14  <---------ZAT18            ---------->DOF2<---- -ID1       --------->AHL20(2)<---------CCA1(2)  ---------->DOF2    --------->ANAC58 --------->ARR11(3)   gcttgtgaaaaccattaattttatattcttgcttatctcaacactgcatcagaaagtggacaagttgaatacgaaatggacataaaagacattcttttgc  15178900                                   <-----------GT1                                <---------ICU4                              <---------YAB1 -------->HSFB2a(2)         <---------AHL20(2) ---------HSFB2a(2)         --------->AHL20(2)               ----------->GT1 -----ANAC58          --------->ANAC58                     ----------->GT1 -----ANAC46          --------->ANAC46                    --------->DAG2           ---------->DOF2 -DOF2     ---------->DOF2 --------->AHL20(2)            ---------->DOF2      <----------ID1 -----ANAC58          --------->ANAC58              --------->At4g35610    ---------->DOF2     <-----   gtctagatgataccaaagtatggcacgaaattaatattcacaaaatggggaaatagctgaaaagtgaaaaaatcaacaaaagaacaaaagcttgaagctt  15179000                    --------->ZAT6              ----------->GT1           <---------ARR14(2)                                              --------->DAG2           --------->ARR14(2)                                    --------->YAB1  --------->ICU4        --------->YAB1                                           --------->AHL20(2) <---------YAB1       <---------ATHB12                                     ------------>CBF----------->GT1        --     --------->WOX13(1)                              <-----------GT1      ---------->DOF2    ------>MYB83 -----DOF2<---------CCA1(2) ----------->GT1     --------->AHL20(2)     --------->AHL20(2)    ------>MYB46(1)   tactcatcaatcatatctgttaaaactagggggaaaaaaactgaatgcgaataaataaccctggcaataaaaaataaaaagtaattctcattacctacaa  15179100                            --------->ANAC58         ------->TEIL       <---------TOE2(3)                <---------ZAT6             <----------DOF2      --------->ANAC58      --------->ANAC58           --------->ZAT6               --------->ANAC46      --------->ANAC58  --------->ARR11(3)        --------->YAB1                 <-------TEIL -------->DOF2     --------->MYB46(3) *TSS --------->At4g35610  ---------->DOF2 --------->CCA1(2)   acaaagacacgaacttgatcaacaaatatcaaggaaacgagaattagatgaagaataagactagtggaaagaccagagagagatacaggcctttcaatgg  15179200                                                                              <------ZmHOX2a(2)                                                                    <---------ANAC46                                                                    --------->ANAC58                                                                    --------->ANAC55(2)                                                                    <---------TGA1a                                                                    --------->ANAC55(1)                                                                    --------->O2                                                                    <---------O2                                                                    --------->TGA1a--------->ZAT6                                --------->ARR11(3)                  <---------ANAC55(2)                           --------->YAB1                           --------->ANAC58        <--------                      ------>ZmHOX2a(1)                 --------->ZAT6       <---------ARR11(3)                 --------->GLK1(1)                   --------->AtMYB61       --------->ARR11(3)   <--                 <---------GLK1(1)             --------->YAB1      <-----------------------TaNAC69(2)      <---------ANAC55(2)<-----------HVH21    <---------YAB1    <-----------HVH21  <---------ALFIN1   aagctattacatgagtgagaactcctcagtcatagctcttgaagaacgatgatcaccatcactagcagtcacgtatgaagatcgaacactctcttgacct  15179300                                                                                                    <                                                                                                    -                                              <---------At4g35610                           ------>ZmHOX2a(2)                                              --------->At4g35610                          <------ZmHOX2a(2)                                             ------->TEIL                      <---------ARR11(3)   -               ------->TEIL        ------->GAMYB                         --------->YAB1   <---------ARR11(3)    <---------GLK1(2)             --------->MYB46(3)                    <---------ATHB12  --------->ARR14(2) -WRKY18(1)    -------->P        --------->At4g35610                  --------->WOX13(1)  <---------ARR14(2) -------ALFIN1<-----------GT1 <------ZmHOX2a(2)                  <---------ARR11(3)  -------->P  <---   ccaccagcatctctatcaacctcttctattcgatcaacagcctcatgaagctcaattctcttctcaatatcccaatcacaacatctcaacccgatcttaa  15179400                                                                                                   <-                                                                <---------ZAT18                   ---                  <---------ANAC58                              --------->ZAT18                   ---    --------->REM1(1)                                           <---------ZAT14               ------- ---------At4g35610      <----------DOF2                   <---------At4g35610                ------- -------->ZAT2    <---------ANAC46          ------>ZmHOX2a(1)   --------->ZAT14            ------->GAMYB -------->At4g35610  <---------ZAT18   <---------At4g35610 --------->At4g35610  --------->ZAT14   <-- ------At4g35610  <---------ANAC58<----------DOF2     --------->ANAC46      --------->ANAC46  -------   gcagcttcaacatttgtgcttcgtgctctttccctgctttcatctccttatcaaacacatcagcagtccactcggttctcgctacagactcaacccaagc  15179500                                                       <-----------HVH21                                                    <---------ANAC58                                =                                                    <---------ANAC58                                =        <---------ICU4                         --------->HSFB2a(1)                                <--        --------->YAB1                         --------->HSFC1(2)           <---------GLK1(2)     --- --------MYB52(2)                              <---------HSFB2a(1)          <---------ARR14(2)    <-- ------>ZAT2               ----------->RAV1(2) <---------HSFC1(2)           --------->ARR14(2)<------ ------>At4g35610          <---------ANAC58  --------->ARR14(2)           <---------YAB1  <---------ALFIN1 -->ANAC58                 <---------ANAC58 <------NtERF2             --------->GLK1(2)   --------->ANAC46 -->ANAC46   <---------At4g35610           --------->LBD16   --------->GLK1(2)     <---------ATERF1(1) -------At4g35610 <----------DOF2         --------->LBD16   <---------GLK1(2)     <---------TOE1(2) - -->ANAC58   --------->At4g35610         <---------LBD16 --------->YAB1 --------->YAB1  <---------ALFIN1   agctaactcatcatcagctcctttcccttgcctgagataattcgccggaaacttccctgtcagaatctcaagaatcaagattcccaggctccacacatct  15179600  Previous    Next  AGI:  At4g31240.1    Description:  electron carrier. similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G60420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43974.1); contains InterPro domain C1-like (InterPro:IPR011424); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin-like; (InterPro:IPR011594); contains InterPro domain Thioredoxin fold (InterPro:IPR012335) Range:  from: 15176461    to: 15178774    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g31250.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G20190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43973.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611); contains InterPro domain Tyrosine protein kin Range:  from: 15178931    to: 15181757    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g31248.1    Description:  other RNA Range:  from: 15179138    to: 15180809    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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