Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                               ------                                                                                               <-----                                                                                               ------                                            --------->TOE2(2)                                 <------              <---------ATHB12    ----------->GT1                                      <-----------GT1          <------NtERF2           <----------ID1                                    --------------->AtSPL8        --------->ALFIN1       ---------->DOF2       <---------YAB1                 <---------------AtSPL3     --------->DAG2       <---------At4g35610     <---------ARR14(2)              --------->ARR14(2)   ---------->DOF2        --------->At4g35610     --------->ARR14(2)              <---------ARR14(2) ------>At4g35610  --------->ALFIN1         --------->TOE1(2)     <-----------GT1<------ZmHOX2a(1)   agtagcaaaggtggcaatgaagtgtttgagctcgaaaggaaaaaaacgtccgaatatgagagaagtttttacagagttggagaggatttgtacttctccg  15129700        --------->At4g35610    >>>>>>>>>TBF1      <-----------RAV1(2)<---------TOE2(3)   <-------TEIL       <---------WOX13(1)  --------->CCA1(2)  <---------ARR14(2) --------->ARR14(2)  --------->ARR14(2) <---------ARR14(2)--------->LBD16                                 --------->bZIP60(1) ---->LBD16      <---------LBD16                                   <---------bZIP60(1) --->ANAC46    <---------ARR14(2)          >>>>>>>>>TBF1        ----------->HVH21 ----HSFB2a(2) --------->ARR14(2)    >>>>>>>>>TBF1              ----------->TGA1 --->HSFB2a(2) --------->MYB52(1) >>>>>>>>>TBF1    <------ZmHOX2a(1)                  --------->GLK1(2) ---LBD16  <-------TEIL----------->HVH21>>>>>>>>>TBF1 <------ZmHOX2a(1)               <---------ARR14(2)   gaagattcacaggtgcataaccggattgacgaagaagaagaagaagaagaagaggaggaagaagttgtgacgacaataaacagaggcgattcttggagca  15129800                              <---------ANAC58                                                    <--                           <---------RAP2.6(2)                                                XXXXXXX                --------->TOE2(3)  <---------At4g35610  --------->MYB46(3)               --------->ANAC55(1)            <---------ALFIN1  <---------ANAC58  --------->ARR11(3)                       --------->ANAC55(2)     <---------At5g28300 <-----------RAV1(1)   <---------At4g35610      ----------->HVH21<---------ANAC55(2)    <-----------GT1 --------->ANAC55(2) ------>ZmHOX2a(1)          ------>ZmHOX2a(1)----------->HVH21 <---------ZAT6 --------->TOE1(3)--------->REM1(1)     >>>>>>>>>>>>>>>>>LFY        <---------WOX13(1)   ttagtgttactgctccagccttaagtattgtggcttcatctccttcttcagatgttgaaccattgtttcctcgtctcacatggtgactgacacttaattt  15129900                           <---------AHL20(2)                                            <---------YAB1                          <---------AHL20(1)           --------->TOE2(3)              <---------MYB52(1)                          --------->AHL20(1)           <----------DOF2          <---------ARR14(2)                          --------->AHL20(2)        <-----------GT1             --------->ARR14(2)                          <---------AHL20(2) --------->ARR11(3)                <------ZmHOX2a(1) -------TOE2(3)           --------->ARR11(3) <---------ARR11(3)              <---------TOE2(3) XXXXXXXXXXXXX>MIR870     <---------ARR11(3)<---------CCA1(2)                <---------ANAC55(2)   --   gatgtttcttcttacaacgtttgtgtaatatatttgtaacatctatatatcttgttactttagtcttgagttttgtattaaggaacctgttatgtttgtt  15130000                             --------->ALFIN1                            <-------MYC4                            ------->MYC3                            ------->MYC2                            <-------PIF5                            ------->PIF5                            ------->MYC4                            <-------MYC2                            <-------MYC3                      <---------bZIP60(1)                      --------->bZIP60(1)                    --------->YAB1              <---------ANAC46                    <---------ICU4              <---------ANAC55(2)                <---------ARR14(2)                   <---------YAB1               <---------ANAC55(1)               <------NtERF2            <---------YAB1 <---------ANAC46  <---------MYB52(1)                  *TSS        <------------CBF   ======================bZIP_DOF                        --------->LBD16      <---------AHL20(2)   <---------TGA1a<---------TOE1(3)                     <---------ANAC58      --------->AHL20(2)   --------->TGA1a<---------TOE2(3)              ------------>CBF      --------->AHL20(1)   --------->O2  <---------DOF5.7(2)   <---------ZAT14  <---------ANAC58     --------->AHL20(2)    <---------ANAC55(2)  --------->ANAC55(2)      <---------ATHB12     <---------AHL20(2)    <---------O2--------->DOF5.7(2)     --------->ZAT14  <---------ANAC46 --------->GT1     --------->ICU4     <----------DOF2          <---------ZAT18 <---------LBD16    <--   tttgtaaattaattgtgagtgatgatgacacgtggaagagcattaacgttatgtgtcttcttcagagcacatcaaatcaatggcggataagagttttatg  15130100                   --------->ANAC58                   --------->TGA1a                                                         --------->CCA1(2)                   --------->ANAC46                                                       <---------ARR11(3)                   --------->ANAC55(2)                                                    --------->ARR11(3)                   --------->ANAC58                                                     <---------TOE2(3)                   --------->O2                                                         <---------TOE1(3)                   <---------ANAC55(2)                                             <----------DOF2                   <---------TGA1a                                               ------>MYB83      <---------ANAC46                                                           ------>MYB46(1)    --------->MYB52(1)                      ------>ZmHOX2a(2)                 --------->MYB46(3)   ----------->TGA1<---------O2           --------->ARR11(3)                --------->ARR14(2)   ----------->HVH21                    <---------YAB1                      <---------ARR14(2)    <--  XXXXXXXXXXXXXXXXXXXXX>MIR173 <---------ETT(2)                          <---------HSFB2a(2)   <----- ---------HVH21  <-----------GT1  --------->ANAC46                       --------->HSFB2a(2)   <-----   tgtcactgacggagagaaatcacgtctcttctgtccacgaagatgatcgtgcaagaccgaagcgataagtctcttgcagaaccaacttttaagatttaag  15130200         <----------DOF2         <---------DAG2        --------------->AGL15       ----------------->AGL3       <-----------------AGL1       <-----------------AGL3     ---------->ID1 <---------ANAC58 <---------ANAC46 <---------ANAC58    ------>ZmHOX2a(1)                                          --------->LBD16 ------P<---------------AGL15                                              --------->GLK1(1) ----TOE2(3)        --------->TOE2(3)            --------->ARR11(3)        <---------GLK1(1)     <--- ----TOE1(3)    ---------->ID1   <---------WOX13(1)            --------->MYB52(1)          ----------   gttgcttgtcccttttttggctccttaattcttggattgatagagaaaatggatattgggattagaaacggatggagaactccgaagacttcagaaagct  15130300                                --------->TOE2(3)                                --------->TOE1(3)                         --------->ARR11(3)                         <---------ARR14(2)             <---------TOE1(2)-------->P            --------->LBD16------>ZmHOX2a(2)            =====================HOX2a_HOX2a            ======================HOX2a_HOX2a           <---------LBD16<------ZmHOX2a(2)   =================================HOX2a_HOX2a   <---------MYB59       --------->ARR14(2)   ================HOX2a_HOX2a------>MYB83   ------>ZmHOX2a(2)     <---------ARR11(3)     <---------ZAT2 <---------ARR11(3)    ----------->ARR10  ------>MYB46(1) <---------ARR14(2) <---------ANAC58      ------>MYB83 --------->ARR14(2) <---------ANAC58    --------->AtMYB61  <----------DOF2 <---------AGP1     <---------ANAC46 --------->ZAT6     <-----------GT1                --------->ATHB12 ------LBD16------>ZmHOX2a(1) ------>MYB46(1)<---------LBD16                   <----------DOF2 >DOF2    ----------->RAV1(2)------>ZmHOX2a(1)<-----------RAV1(2)           --------------->AGL15   ctggatctaatttcctgggtttgcttagatcctaccctaacaccatccccaggtgtttatactttcttagtttatcttcttcttttggtttattggattt  15130400                  <-----------RAV1(2)         --------->At4g35610         --------->GLK1(1)         <---------GLK1(1)       <------ZmHOX2a(1)                                                                      <------      <---------At4g35610                                         ----------->GT1             -------    <-----------RAV1(2)                                           --------->YAB1              <------  <-----------HVH21<---------LBD16                               --------->ICU4      ---------->DOF2- <------MYB46(1)  <---------LBD16            <-------TEIL        <---------ATHB12---------->DOF2    < <------MYB83   <-----------HVH21         --------->ICU4---------->DOF2--------->GLK1(1)     <-------   gataggtcaggagctctgtttcagggagagaattcatatgggtaatgttcatagtggcaaaagagcaatggtgatttctagtttaaagaaagcgaatatc  15130500                                                                                        <---------RAP2.6(2)        <------ZmHOX2a(1)                                                          <---------ANAC58     --------->HSFB2a(2)                                                           <---------ANAC58     <---------HSFB2a(2)                                                           <---------AtLEC2 -----ARR10--------->At4g35610                       <----------DOF2               <---------ANAC46 -->ARR11(3)                                   --------->ZAT2                 --------->ZAT2 ---ARR11(3)                                   <---------ZAT2                 ----------->RAV1(2) -------->At4g35610                            --------->At4g35610        --------->ANAC58 ---------At4g35610   <---------TOE2(3)        <---------At4g35610        --------->ANAC46 --CCA1(2) <---------At4g35610           ---------->DOF2                  --------->ANAC58        <--   tctgcttcgaggaagcagagaattaagctagagattaatggagaaaaggagctgactttcagtgagtttttgaaacacccatctggcatggaggctgtga  15130600  Previous    Next  AGI:  At4g31110.1    Description:  kinase. Identical to Wall-associated receptor kinase-like 18 precursor (WAKL18) [Arabidopsis Thaliana] (GB:Q0WNY5;GB:Q9M091); similar to wall-associated kinase, putative [Arabidopsis thaliana] (TAIR:AT1G17910.1); similar to wall-associated kinase, putative [Arabidopsis thaliana] (TAIR:AT4G31100.1); similar to wall-associated kinase, putative [Arabidopsis thaliana] (TAIR:AT1G19390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67876.1); contains InterPro domain EGF calcium-binding (InterPro:IPR013091); contains InterPro domain Wall-associated kinase (InterPro:IPR013695); contains InterPro domain Protein kinase, core; (InterPro Range:  from: 15127252    to: 15130027    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g31115.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G04440.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ77866.1); similar to Os08g0521800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001062277.1) Range:  from: 15130081    to: 15132041    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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