Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                    ---                                                                                                 <---                                           <---------YAB1                                        <---        <-----------GT1                  <-----------GT1                                         <---     <---------YAB1                   <----------DOF2                                            ----   <---------MYB46(3)              <---------ARR11(3)                                            ---- --------YAB1                      --------->ARR11(3)                                       <-------- ---DOF5.7(2)                 <---------YAB1                                              --------->ATHB12 >DOF5.7(2)     <---------LBD16   --------->YAB1    <---------GLK1(2)          <-----------GT1  <----   gacgattgttatacgttttgggggtttgaattctaattatcttttaccattacagattgtctctgtttctgttaaatgtattcactcttggatgatggat  15123400                                                                                         ------>MYB46(1)    <----------DOF2                                                                      ------>MYB83    <---------DAG2                                                        <---------ANAC46       <---   <---------DAG2                                                         <---------ANAC58       <--- ------>KAN4(2)                                                           <---------ANAC58 --------->ZAT6 ------ICU4                                                     <---------AHL20(2)      --------->MYB55(1) ------HSFB2a(1)                         <---------YAB1         --------->ATHB12       <---------MYB59 ------KAN4(1)                    <----------DOF2              --------->AHL20(1)      <---------MYB111(1) ----->KAN4(1)                --------->REM1(1)                --------->AHL20(2)      <---------MYB46(2) ----->HSFB2a(1)              <---------ALFIN1                 <---------AHL20(2)     --------->ANAC46 -WOX13(1)               ------->TEIL <---------YAB1           <---------AHL20(1)     --------->ANAC55(2) --ZmHOX2a(2)    --------->ZAT6  <---------DAG2            <---------AHL20(2)       <-----------GT1   cattcccttttcgattttagcactacgagcctacacctttcttattaatcttcttcaatattcaatttattggatagcgtttttttatacctaactctgc  15123500                                                                                           --------->AHL20(2)                                                                                           <---------AHL20(2)                                                                                           --------->AHL20(1)                                                                                          <---------AHL20(2)                                                                                 <----------DOF2                                                                                 ====================                                                                               <---------YAB1  <-----                                                                              --------->ARR11(3)  <--                                             ------->TEIL         --------->ARR11(3)      --------->AHL20(2) <---------YAB1            <-----------GT1<---------YAB1          <---------GLK1(2)    <---------AHL20(2) -------DOF2       ---------->ID1       --------->CCA1(2)         <---------ARR11(3)----------->GT1 ------DAG2      <-----------RAV1(1) <---------YAB1 <----------DOF2           <---------ARR11(3) ----   tttttcattgtttttttttttgttgtattttactagttcatgatatgaatatgacttttgcgatagtagatttttaaaattatctttagtaaattaatta  15123600                          ------>ZmHOX2a(2)                        <-----------ARR10                  <-------MYC3                  <-------MYC2                  ------->MYC2                  ------->MYC3                 <---------ANAC55(2)                 --------->TGA1a                 ==========================bZIP_DOF                 ==========================bZIP_DOF                 --------->ANAC58                 --------->ANAC58                 <---------TGA1a                 --------->ANAC55(2)                         ----------->GT1          --------->DAG2                 --------->ANAC55(1)             <---------AHL20(1)             ------>NtERF2      <---------ANAC58  <---------ARR11(3)       --------->AHL20(1)             --------->LBD16      <---------ANAC58  --------->ARR11(3)       <---------AHL20(2)            --------->ANAC46 ==========================bZIP_DOF              --------->AHL20(2)        <----------DOF2    ------>ZmHOX2a(2) ------GT1       --------->O2   <----------DOF2  <---------ARR11(3)       <---------ANAC58  --------- -------MYB59    --------->ANAC46  ---------->DOF2<---------AHL20(2)      <---------ANAC58  <-------- ------------->AG<---------O2<---------ALFIN1    --------->ARR11(3)---------->DOF2   ---------->DOF2   ccaaaattgtttgcaaaacacgtgatgatctacactttaaagactttgaaatatattttaaactggtaaaaaagatgctttccgccataaagttgatctc  15123700                                                            --------->ANAC58                                                            --------->ANAC58                                                            --------->ANAC46                                                           ------->MYC2                                   ---------->DOF2         <-------PIF5                             <---------ARR11(3)            ------->PIF5                             <---------AHL20(1)            <-------MYC2                             --------->AHL20(1)            ------->MYC3                             --------->ARR11(3)            <-------MYC3                          <---------AHL20(2)      --------->ATHB12         ---------->DOF2  --------->AHL20(2)      --------->ATHB51 --------->ANAC58        --------->AHL20(2)       <--------HAHB4                         ---------->DOF2 --------->ANAC58        --------->YAB1           <---------ICU4                  <---------ALFIN1 >ARR11(3)            --------->WOX13(1)         --------->ICU4           ------>ZmHOX2a(1) -ARR11(3)          ------------>CBF             <---------YAB1     <----------DOF2    *TSS  <-------   atcaagaaacacaaagagaggtagcaattaaaatattcaaagatgaagagcattattagcacgagcaactcttttcctctgtctccacttacaaaggaac  15123800                      <----------ID1                   ---------->DOF2               <---------ANAC58           <----------DOF2                       <---------ANAC46           <---------DAG2                   --------->ARR14(2)       ===================================HOX2a_HOX2a      <---------At4g35610          <------ZmHOX2a(1)     <---------ARR11(3)         <---------LBD16  <---------ANAC58   --------->At4g35610          <--- ---ID1------>ZmHOX2a(2)        <-----------RAV1(2)      <------NtERF2                       --------   aaaacttgatctgctttatagtaaagaacaaaactcaggaagttcaaatttgcttgggcagagaaccatgagctacaaaaatacaaataactctcacttg  15123900                                          ------>ZmHOX2a(2)                                         --------->GLK1(1)                                         <------ZmHOX2a(2)                                        <---------ARR14(3)                                        <---------AGP1                                        --------->ARR11(3)                                        <---------ARR14(2)                                        --------->ARR14(2)                                        <---------ARR11(3)                                        <-----------ARR10                            <----------DOF2     <---------At4g35610                                 <                            ====================HOX2a_HOX2a                                         <                            =====================HOX2a_HOX2a                                   ------                            ------>ZmHOX2a(1)   --------->At4g35610                            <-----                           --------->TOE2(3)    --------->ZAT2                           --------->ALFIN1                    <---------At4g35610<---------CCA1(2)                       ======================          ----------->GT1 ------>ZmHOX2a(2)----------->HVH21                   <------ZmHOX2a(1)<---- ------GLK1(2)      ----------->RAV1(2)<---------At4g35610                   <---------ANAC46 ======= ->ANAC55(2)<---------MYB52(1)      <---------At4g35610                   --------->ALFIN1    <------ZmHOX2a(1)   attctcttcaagctgttacttcttctgatcctttattctgcagatctcacagcttcaagctcatgtcgaagtgaatgtggaggatgcaaatgtggaggaa  15124000            <---------DAG2        <---------ALFIN1   <------ZmHOX2a(2)                                                                    <---------ZAT18 ---------ANAC58                                                                       ---------->ID1 ---------ANAC58                                                                   <---------ANAC58 - --->ARR14(2)                                       --------->ANAC46           ---------->DOF2      < ----ARR14(2)   --------->HSFB2a(2)      --------->HSFB2a(2)                  <------ZmHOX2a(1)    <- =========HOX2a_HOX2a                    <---------HSFB2a(2)   <---------ARR11(3)  <---------ANAC58<- -----GLK1(1)<----------DOF2     <---------At4g35610--------->ANAC58       <-----------RAV1(2)  <---- =========HOX2a_HOX2a            --------->At4g35610--------->ANAC58       <---------LBD16  <--------   ttgcgatcccatacccttttggaatcggtaagggctgctatctcgagaagtcatacgaaatcgaatgtcttaatacttcaggaaagcttgtcccctttct  15124100                                                  <---------MYB52(1)                       <---------HSFB2a(1)                                                 ------>ZmHOX2a(1)                         --------->HSFB2a(1)     --------->ICU4                      <------MYB46(1)            <---------At4g35610   <---------ARR11(3) -------------->AGL15                    --------->ANAC58           --------->At4g35610  <------ZmHOX2a(1) ---------------AGL15                    --------->ANAC58    <---------ANAC58         <-----------RAV1(2) ----------------AGL2                  <--------P<----------DOF2<-----------HVH21    --------->LBD16 ----------------AGL3                 <---------MYB52(1)     <---------ANAC58       --------->ANAC46 ------DOF2       <---------MYB46(3)------>ZmHOX2a(1)    <---------DEAR3(2)        <---------LBD16 <- --DOF2   ---------->DOF2<-----------GT1 <------MYB83 <-----------HVH21        ----------->ARR10>>>>>   ttctgtaattagcaaagaagttgttagtatccatcttcctggtaggcaatcctttgggtcagttcgtgtcagaagtccgataacatccgcaggatgttct  15124200                                                                                        <---------At4g35610                                                                                        --------->At4g35610                                                                                        <---------ZAT2                                                                                        --------->ZAT2                                                                                  <---------ANAC46                                                                                  <---------ANAC58                                                                                  <---------ANAC58                                                                                  <-------GAMYB                                                                                 <------MYB46(1)                                            ------>ZmHOX2a(1)                    <------MYB83                 ----------->RAV1(1) --------->ARR14(2)                          --------->MYB52(2) <                --------->ANAC46     <---------ARR14(2)                          <---------MYB46(3) <               --------->LBD16    <---------ANAC46    --------->MYB52(2)         --------->MYB55(2) <      ---------->DOF2           --------->MYB52(1)  <---------MYB52(1)          <---------AtMYB61   < --------ZAT6 --------->ANAC46 ----------->HVH21   --------->TOE2(3)           <--------P          <- >>ZML2      <---------LBD16------->TEIL    <----------DOF2                   <-------GAMYB      ----   agtgatggaaaagactccgcaccagtaatgaacttgacggatagtccttttttcgttagtgacataaacaaccttgtgggagttggttgcagcagcaagg  15124300  Previous    Next  AGI:  At4g31080.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G24330.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66718.1); contains domain PTHR22166:SF1 (PTHR22166:SF1); contains domain PTHR22166 (PTHR22166) Range:  from: 15120894    to: 15123492    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g31100.1    Description:  wall-associated kinase, putative. Identical to Wall-associated receptor kinase-like 17 precursor (WAKL17) [Arabidopsis Thaliana] (GB:Q9M092); similar to wall-associated kinase, putative [Arabidopsis thaliana] (TAIR:AT1G17910.1); similar to wall-associated kinase, putative [Arabidopsis thaliana] (TAIR:AT1G19390.1); similar to kinase [Arabidopsis thaliana] (TAIR:AT4G31110.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76906.1); contains InterPro domain EGF calcium-binding (InterPro:IPR013091); contains InterPro domain Wall-associated kinase (InterPro:IPR013695); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); Range:  from: 15123787    to: 15126537    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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