Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                              <--------                                                                                           <---------                                                                                        --------->YAB1                                               ---------->DOF2                          <---------ICU4                                        <---------ICU4                                 <---------YAB1                           --------->ANAC46  <---------YAB1          <---------GLK1(2) --------->ICU4                           --------->ANAC58--------->YAB1           <---------ZAT2   --------->YAB1                           ------>MYB83 --------->YAB1              --------->ZAT2   <---------ICU4<-                           --------->ANAC58<---------ICU4         <---------ALFIN1  <---------YAB1 --               <---------CCA1(2)       <---------ATHB12         ------>NtERF2       --------->ICU4---            <------NtERF2  ------>MYB46(1)<---------YAB1     ------>NtERF2     ------>ZmHOX2a(1)-----   tcatcaacaatgtcgtcgtctctcaaaccaagccaattcccatcatcatcaaagaaaaacctctgccaccagcttcttctcctcttattattattacccg  15113700     <---------MYB52(1)    <-------GAMYB <---------ALFIN1 ---GT1          <---------ZAT14 --GT1  <---------YAB1        <---------ARR14(2) --------YAB1    --------->ZAT14       <---------HSFC1(2)  --------->ANAC46 --------->HVH21 --------->LBD16       --------->HSFC1(2)  <---------ALFIN1 ------>SPL7    --------->ANAC46    ---------->DOF2     --------->ANAC46   --------->YAB1 ---->LBD16    <---------LBD16--------->ARR14(2)       -------->P------->GAMYB   tatgactgttattcttctccgcactgggaacaaatctccaaagcttcttccttctcttaccccacaacgaaatcgaatcacaaggcttataacgaagaag  15113800                   <------ZmHOX2a(2)                  <-----------ARR10                  --------->ARR11(3)                  <---------ARR14(2)                  --------->GLK1(2)                  <---------ARR14(3)                  <---------ARR11(3)                  --------->ARR14(3)                  --------->ARR14(2)                                                           ------                  <---------AGP1                                                               ------                 <------ZmHOX2a(1)                                                             ------         --------->ICU4                                                                     ---------         <---------YAB1                            <-----------------------TaNAC69(2)       ---------       --------->YAB1                   --------->ATHB12        >>>>>>>>>WRKY18             ---------      --------->ICU4                    --------->YAB1         ----------->HVH21      ------->TEIL      <---------YAB1------>ZmHOX2a(2) <---------WOX13(1)       --------->WRKY12<------ZmHOX2a(1)   agaagatgatgatgattcaggatctgggttttgactactgaatgataagcagtggcataagaccattgacgagctcatcaaggacatgaatcaaacccaa  15113900                                                                       <----------DOF2                                  --------->GLK1(2)                <----------DOF2                                 <---------GLK1(2)              --------->ARR14(2)                          ----------->RAV1(1)                   <---------ARR14(2)                         --------->MYB46(3)                     <---------ARR11(1)                       ----------->RAV1(1)                      --------->ARR11(3) ----->RAV1(1)      --------->ANAC58                            <-----------ARR10 >MYB83             --------->ANAC58    --------->HSFB2a(2)     <---------ARR11(3) >MYB46(1)          --------->ANAC46    <---------HSFB2a(2)    <---------GLK1(1) >ANAC46          ---------->DOF2<---------ARR14(2)            <---------CCA1(2)             -------- >ANAC58       --------->TOE2(3) --------->ARR14(2)            <---------ARR14(1)       <----------DOF2 >ANAC58 <----------DOF2 --------->REM1(1)--------->ANAC46     --------->GLK1(1)    --------->MYB46(3)   cattgttcggactttaatctcaaagcaacaacacagattcttctacaaaacccagacaaaccagcatatctttctttgtaaattcaacaactttacaaag  15114000              --------->LBD16            <---------LBD16          --------->GLK1(2)          --------->ARR14(2)          <---------ARR14(2)                                                       <---------ZAT2       --------->LBD16                                                             --------->ZAT2      --------->ANAC58                                                           <-----------RAV1(2)      --------->ANAC58                                                     --------->WRKY12      --------->ANAC46                         ---------->DOF2             ----------->HVH21      --------->ANAC55(1)                --------->At4g35610             --------->ZAT2<---------ANAC46      --------->LBD16                    <---------ZAT2                  --------->At4g35610      <--     <---------LBD16                     --------->ZAT2                  <---------At4g35610     ---- --------->ARR14(2)   --------->CCA1(2)  <---------At4g35610           <---------GLK1(2)         <--- -->DOF2 <---------GLK1(2)     <---------TOE2(3)     <---------At5g28300--------->GLK1(2) <---------ARR14(2)   ccctatacccggaatccggtgaagataagaattagggttcttcagctcagaaagttaccgagagagagaaccagaagctgaccccagttgtggatagtgg  15114100                                                                                             <-------                                                                                             <-------                         <----------DOF2                                                <------------CBF              --------->DAG2                                                          <---------YAB1             ---------->DOF2                                                          --------->ICU4           >>>>>>>>>GATA-1                                             --------->ARR11(3)   <--------        <---------WOX13(1)                                             <---------ARR11(3)   <--------     <---------YAB1 --------->ANAC58                                  --------->RVE1(1)--------->ATHB12 <-----------RAV1(2)<---------ALFIN1                                  --------->CCA1(1)<---------ICU4 -------GLK1(1)     --------->ANAC58                       <---------TOE2(3)        ---------->DOF2 ----->ARR14(2)--------->ANAC58                            <---------YAB1   <---------MYB52(1) ------ARR14(2)--------->ANAC58 *TSS            <<<<<<<<<TBF1  ----------->GT1   --------->TOE2(3)   ataccagatgatagataaagccacgctcttttttttgttttgttatcttcttcttcaaattaagcttgtaaaatatctgttatccataaagattgctttt  15114200                <-----------GT1            --------->AHL20(1)            --------->AHL20(2)            <---------AHL20(1)            <---------AHL20(2)         <---------ICU4                ----------->GT1                 ----------->GT1        --------->AHL20(2)             <---------ZAT6                <---------WOX13(1) --DAG2 <---------AHL20(2)    <---------AHL20(2)           <---------MYB52(1) ---DOF2<---------ATHB12    <---------AHL20(2)          *TSS       --------->ATHB12 -ANAC58--------->ICU4--------->AHL20(2)      <------------CBF    <---------YAB1                 <--- -ANAC58<---------ATHB51--------->ANAC55(2) --------->ICU4--------->LBD16           <---------WOX13(1)   ttggtttcaaataattaattacatttacatattattttgtagagtcaaaattgttgtttccgtcgtttttgattggctaaaaattgaatgactgtatatt  15114300                                                                                            <--------                                                                                            ---------                                                                                         --------->YAB1                                                                                      <---------GLK1(1)                                                                                   --------->LBD16      <---------AHL20(1)                                                          <---------HSFB2a(2)      --------->AHL20(2)               <---------ZAT14             ----------->ARR10  --------->GLK1(1)      <---------AHL20(2)         <----------DOF2                <---------ANAC46  --------->HSFB2a(2)      --------->AHL20(1)  <---------DAG2                 <---------------AGL15   <---------ANAC46     --------->AHL20(2)   <----------DOF2                --------------->AGL15   <---------LBD16 --------GT1    --------->AHL20(2)     --------->ZAT14 --------->At4g35610      <---------LBD16   tacagaaataaattttaagtaaattccactttcttctttagtacagagttatggagttgctgaatggagtagaaactctagtttcgggaattcatcatca  15114400                                             ------>ZmHOX2a(2)                                            <------ZmHOX2a(2)                                           <---------AGP1                                           --------->AGP1                                           <---------ARR14(3)                                           --------->ARR11(3)                                           --------->ARR14(2)                                           <---------ARR14(2)                                           <---------ARR11(3)     --------->GLK1(1)                                   ------>ZmHOX2a(2)              <---------GLK1(1)                                  <------ZmHOX2a(2)          --------->YAB1                                 --------->ARR14(2)         <---------ATHB12                                 --------->AGP1             --------->ICU4                         <X                                 <---------AGP1        <---------HSFB2a(2)           <-----------GT1                                 --------->ARR11(3)    --------->HSFB2a(2)      ---------->DOF2    <X                                 <---------ARR14(2)    --------->LBD16       ----------->GT1       <X                                 <---------ARR11(3)   <---------ANAC46   --------->LBD16         ----                               ----------->ARR10      <---------LBD16  --------->LBD16           ---- -ICU4                  <---------GLK1(2)  --------->ARR14(3)<---------ICU4---------->DOF2       <--- >YAB1 --------->MYB52(1)      --------->MYB59       <---------LBD16   <---------LBD16   <----------DOF2   ccatcgtactaacgcgaagagaaacagattagttagatctgtcaagatcttaaactccgggaatcatgaaatccccagaaagtaaagtttccttttttgt  15114500                                       --------->LBD16                                      <---------ANAC46                                      <---------ANAC58                                      <---------ANAC58                                      <---------ANAC55(1)          <---------------AGL15     ------>MYB46(1)                             <----------DOF2          --------------->AGL15     ------>MYB83                  <---------ANAC46         <-----------------AGL1   --------->AtMYB61               <---------ANAC58       <-----------GT1      ------->GAMYB--------->ZAT14          <---------ANAC58 XXXXXXXXXXXXXXXXXXMIR156H --------->MYB46(3) --------->YAB1   <-------PIF5    <---------ICU4 XXXXXXXXXXXXXXXXXXMIR157D <---------MYB52(2)<---------ATHB12  ------->PIF5  <---------ARR11(3) XXXXXXXXXXXXXXXXXXXMIR157A-C  <---------ALFIN1               <---------At4g35610   <----------ID1 ----->ZAT18              <---------TOE2(3)--------->WOX13(1) --------->At4g35610   --------->ANAC46 ----->ZAT14             <-----------GT1--------->AtLEC2      --------->ZAT2 --------->ARR11(3) ------ZAT18           <---------AHL20(2)<---------ZAT18    <-----------RAV1(2)------>ZmHOX2a(2)    -   gctctctattttctgtttgaggcattttaacgaacaccttccgtgcaatcactatcaattttgcaggtgcctgtgttttgatctttacgacaaattggtt  15114600  Previous    Next  AGI:  At4g31040.1    Description:  proton extrusion protein-related. similar to unnamed protein product [Vitis vinifera] (GB:CAO66548.1); contains InterPro domain CemA; (InterPro:IPR004282) Range:  from: 15111483    to: 15114132    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g31050.1    Description:  lipoyltransferase (LIP2p). Identical to Plastidial lipoyltransferase 2 (LIP2p) [Arabidopsis Thaliana] (GB:Q948J9;GB:O65544); similar to lipoyltransferase, putative [Arabidopsis thaliana] (TAIR:AT1G47580.1); similar to Os12g0596000 [Oryza sativa (japonica cultivar-group)] (GB:NP_001067184.1); similar to hypothetical protein OsI_037716 [Oryza sativa (indica cultivar-group)] (GB:EAY83757.1); contains InterPro domain Lipoate-protein ligase B; (InterPro:IPR000544); contains InterPro domain Biotin/lipoate A/B protein ligase; (InterPro:IPR004143) Range:  from: 15114256    to: 15115639    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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