Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                          <---------ANAC58                                                                        <---------ANAC46                                                                   --------->ATHB12                                                                  <---------YAB1                                                              <----------DOF2      <---------SPL7                                                        <------ZmHOX2a(2)         --------->RAP2.6(2)                           ---------->DOF2             <---------ARR11(3)     ------>ZmHOX2a(2)    <-                         <---------YAB1                --------->ARR11(3)<---------WOX13(1)      <---                     <-------GAMYB         <----------DOF2<----------DOF2<----------DOF2        ----- <---------CCA1(2) <---------ANAC46        <---------DAG2------>ZmHOX2a(2) --------->ATHB12    <----- ------->YAB1<---------TOE2(2)           ------->TEIL  --------->AGP1<---------WOX13(1)       <------ ----ALFIN1--------->TOE1(2)          --------->AtLEC2<---------GLK1(1) <---------ANAC58 ---------->DOF2   ctcatatcaagaacataggtttcggttataaaagcctcccatgcacttttttttagagatctttctttgtgattgcttgatcggccgtatcaaaagcggt  15106300                                                       <---------ZAT14                                                       <---------At4g35610                                                       --------->ZAT14                                                  --------->ZAT14                                                <------NtERF2                                               --------->LBD16                                             --------->ATERF1(1)                                             <------NtERF2                                             --------->RAP2.3(1)                                             <---------LBD16                                            <---------ATERF1(1)               <---------WOX13(1)                                            <------NtERF2                    <---------ANAC58   <---------WOX13(1)                       ------>NtERF2                 <---------ANAC46  <---------ANAC58                         <---------DEAR3(1)           <---------MYB46(3)  <---------ANAC58                         <---------ATERF1(2)         --------->ALFIN1 --------ANAC46              <------ZmHOX2a(1)--------->DEAR3(1)      <-------GAMYB ------MYB46(3)             <------MYB46(1)--------->ATERF1(2)       <---------MYB46(3) ---->ALFIN1                <------MYB83   --------->DEAR3(1) <-----------RAV1(2)              ------ --GAMYB                  <--------P      <---------RAP2.6(2) <---------LBD16<---------ANAC58 ------- ---MYB46(3)<---------ARR11(3)   <---------REM1(1)<---------ZAT14<------ZmHOX2a(1)            <------   tgtggattgctcaatatcaacaagagaggtaggagttgtagatggccgccggagcacagcagtttcaggagcggttgtggattgctcatcttcagagata  15106400                                                      --------->ZAT2                    --------->ALFIN1                 <---------REM1(1)                    <---------ZAT2                  <---------ANAC58                 <---------MYB46(3)                   <---------At4g35610             <---------TGA1a           --------->ALFIN1         <---------At4g35610    ------>ZmHOX2a(1)          <---------bZIP60(2)          --------->ALFIN1         ----------->RAV1(1)--------->At4g35610             <---------ANAC58          <--------P          --------->SPL7         <---------ATERF1(1)              --------->TGA1a        <---------MYB46(3)  <------NtERF2        --------->ANAC58--------->MYB59      --------->O2 --->GLK1(1)   <-------GAMYB<---------SPL7       --------->ANAC58--------->MYB46(2)   <---------O2 -- -->ARR11(3)<------MYB46(1)--------->RAP2.6(2) ---------->DOF2 <---------MYB52(1)  --------->DEAR3(1) ---ARR11(3)<------MYB83  <---------LBD16      =================================================bZIP_DOF   tcaacaagagaggttggggttgtagatggccggactccagcagtttcagagaagccagctccttcgttaggcaaactcattctcgcagacgtggccctag  15106500             <---------ZAT18           --------->ANAC46           --------->ANAC58           --------->ANAC58        <------NtERF2        <------NtERF2         ================================bZIP_DOF       ------>NtERF2          --------->ANAC58      --------->ANAC46        --------->TGA1a      --------->ANAC58        --------->ANAC55(1)           <---------O2      --------->ANAC58        --------->ANAC46              --------->O2         <---------YAB1     <---------ZAT18          --------->O2                <---------RAP2.6(3)   <---------TOE2(3)     --------->ZAT18          --------->ANAC58            ------>NtERF2 --------->ZAT18    <---------ANAC58          --------->bZIP60(2)        --------->RAP2.6(2)   --------->YAB1    <---------ANAC58        <---------bZIP60(2)    ---------->DOF2      <---------PCF2 ------->MYB52(2)        ----------->HVH21      --------->TOE2(3)  --------->MYB52(1)--------->MYB59   ttagtagcgcgccaaggcactatataagtgacacggcagggataagtcaaacttaaaggccgacttgactaatgggccctataatgttaggcccatgttt  15106600                                                                                       --------->MYB52(2)                                    <---------ARR14(2)                                <-------TEIL                           ----------->RAV1(1)      <----------DOF2            <---------ALFIN1                        --------->ANAC58          *TSS     --------->GLK1(1)  <---------ZAT14                        --------->ANAC58    ------>ZmHOX2a(1)                 --------->ZAT14   <----                        --------->ANAC46   --------->TOE2(3)    <<<<<<<<<TBF1>>>>>>>>>>>>>>>>>LFY   -   tgagagagcaagtagagagaagaaacaagcaacaagaagttccttcctcagcctctttccgatttcttcttcagtctctctccactggttcgtcgacttc  15106700                                                                       <-----------HVH21                                                                      <----------DOF2                                                                     <------NtERF2                                                                    ------>NtERF2                                                                    <---------ATERF1(1)                                                                   --------->RAP2.6(2)                                                                   <---------ALFIN1                                                                   --------->RAP2.3(2)                                                                   --------->RAP2.3(3)                                                                   --------->RRTF1(2)                                                                   --------->DREB2C(2)                                                                   --------->RRTF1(3)                                                                  --------->RAP2.3(1)                                                                  --------->ORA47(2)                                                                  --------->DEAR4(2)                                                                  --------->RRTF1(1)                                                                  <------NtERF2                                                                  --------->ATERF1(1)                                                                  --------->RAP2.6(1)                                                                 ------>NtERF2                                                                 <---------ATERF1(1)                                                              --------->ANAC58               <-------                                                              --------->ANAC58              ---------                                ------>NtERF2                 ===================bZIP_DOF   ---------                                --------->LBD16               <---------TGA1a  --------->MYB46(3)----                               --------->ANAC58      --------->ZAT6--------->DEAR3(1)       ---------                               --------->ANAC58    <-----------GT1--------->ERF1           ------>ZmHOX2a(1)  --------->ANAC58             --------->ANAC46 <----------DOF2 --------->ANAC46 ------>MYB83<-------  --------->ANAC58            <---------LBD16   ========================bZIP_DOF ------>MYB46(1) ---- -----ANAC46            <---------CCA1(2)   --------->YAB1    --------->ANAC46 --------->AtMYB61 <--- --------->DOF2   --------->ATHB12         <---------ATHB12   --------->TGA1a  <---------MYB59   ----   gtagaagcaaaaaatgttcttgattcgtctctcccgccataacccatcatcttttacacttctcacgcgccgccttcacgaccaaacaatttcctcgtca  15106800                                       ---------->ID1                                   <----------DOF2                                 <------NtERF2                                ------>NtERF2                               --------->DEAR3(1)                               --------->RAP2.3(2)                               --------->RAP2.6(2)                               --------->RAP2.3(3)                               --------->RRTF1(2)                               <---------ALFIN1                               --------->RRTF1(3)                               --------->DREB2C(2)                              --------->ORA47(2)                              --------->ATERF1(1)                              --------->ERF1                              --------->DEAR4(2)       --------->ARR11(3)     --------->RRTF1(1)       <---------ARR11(3)     --------->RAP2.3(1)         <---------ARR14(2)    --------->HSFB2a(2)      ------>NtERF2                --------->ARR14(2) ----HVH21                   <---------ATERF1(1)          --------->GLK1(2) >ANAC46                     --------->ABI4(1)            --------->ARR11(3) >bZIP60(2)                 --------->DEAR3(1)        --------->LBD16 ----->ANAC58               --------->ANAC46<-----------TGA1 >O2--------->LBD16        --------->MYB46(3)   <---------At4g35610                           <------ ----TGA1               --------->MYB46(3)  <-----------HVH21     <----------DOF2             ------- ----->ANAC58           <---------ATHB12   --------->ETT(2)   ------>ZmHOX2a(1)               ------- ------O2             --------->WOX13(1)  <------NtERF2  --------->GLK1(1)          --------->YAB1--- ----->O2 <----------DOF2 <---------At5g28300   --------->At4g35610--------->DOF5.7(2) --------->YAB1   cgactccgagacctttacaattttcaatcaccgccgcctttgtcgtcgtcagcctccgaaaatcctgactttaaccagaaaaacaacaataagaagaagc  15106900       <---------SPL7                                       <---------ANAC58     <------NtERF2                            --------->ZAT14         <---------LBD16    --------->LBD16                           <---------ZAT14      <---------GLK1(1)   ----------->RAV1(1)                        <-------TEIL  <---------ANAC58   --------->RAP2.6(2)                     <---------DEAR3(2) <---------MYB52(1) ----ID1                             --------->REM1(2)  ------>ZmHOX2a(2) -->ANAC58  --------->ORA47(1)    --------->ALFIN1    <---------ARR11(3) -->ANAC58--------------->AtSPL3<------MYB46(1)       --------->ARR11(3)--------->LBD16 ------->DOF2  <---------ALFIN1 <------MYB83  <---------ZAT18<---------SPL7<-------TEIL   caaagccgcagtaccgtccaccttcttcgctggaaggtgtgaagacggttcactctgatcttccgttcgatttccggttcagttacacagagagttgctc  15107000                                                                                           --------->At5g28300                                                                                           <-------GAMYB                                                                                          <---------DEAR3(2)                                                                                          -----------                                                                                          <---------MYB46(3)                                                                                         <---------ANAC46                                                                                         <---------DEAR3(1)                                                                                        --------->ATERF1(1)                                                                                        <------------                                                                                        <------NtERF2                                                                                        <---------MYB52(1)                                                                                       --------->LBD16                                                                                       <---------DEAR4(2)                                                                                       <---------ERF1                                                                                       ------>NtERF2                                                                                       <---------RAP2.3(1)                                                                                       <---------ATERF1(1)                                                                                      --------->DEAR3(1)                                                                                      --------->ATERF1(2)                                                                                      <---------RAP2.3(2)                                                                                      <---------ATERF1(2)                                                                                      <---------DEAR3(1)                                                                                      --------->RAP2.3(2)                                                                                      --------->RAP2.3(3)                                                                                     <---------LBD16                                                                                     --------->ORA47(2)                                                                                     <------NtERF2                                                                                     --------->DEAR4(2)                                                                                     --------->ERF1                                                                                     --------->DEAR3(2)                                                                                     --------->RAP2.3(1)                                                                                     --------->ATERF1(1)                                                                                    <---------ATERF1(1)                                                              --------->LBD16       <---------RAP2.3(1)                                                             <---------LBD16       <---------DEAR3(1)               <---------ANAC58                             <---------LBD16       <---------ZAT14               <---------ANAC46        <----------DOF2   ----------->HVH21        --------->ZAT14               <---------ANAC58       <---------DAG2 --------->ATHB12             <---------ZAT18      ------>NtERF2                <-----------GT1  ------>ZmHOX2a(2)     <---------MYB52(1)<--------  --------->ALFIN1         ---------->DOF2      ------>ZmHOX2a(1)     ------->TEIL--------->ZAT18   aaatgtgaggccaattggcttgagagaaccaaagtattcaccttttggtcctgatcgattggaccgggaatggaccggtgtctgtgcgccggcggttaat  15107100                                   --------->ZAT2                                   <---------At4g35610                            <---------ARR14(2)                            --------->GLK1(2)                            --------->ARR14(2)                      --------->ALFIN1                    <---------ANAC46              ----------->HVH21    <---------ZAT2            --------->At4g35610    --------->At4g35610            <---------At4g35610   --------->GLK1(2) --------->DAG2 <---------LBD16 --------->LBD16                                                     - >GT1       <-------GAMYB  <------ZmHOX2a(1)                                                     ---- ---------WRI1--------->WRKY12------>ZmHOX2a(2)       ---------->DOF2  <-------TEIL          <------- -MYB52(1) <---------MYB46(3)<------ZmHOX2a(2)---------->DOF2         --------->CCA1(2)      --------   ccaaaggtagagtctgttgacggagtggaggatccgaagctggaagagaaaagaaggaaagtgagagagaagattcaaggggcatcactcactgaagctg  15107200  Previous    Next  AGI:  At4g31010.1    Description:  DNA binding. Identical to CRS2-associated factor 1, mitochondrial precursor [Arabidopsis Thaliana] (GB:Q8VYD9;GB:O65549;GB:Q94B45); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G54890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24450.1); contains InterPro domain CRS1/YhbY (InterPro:IPR001890) Range:  from: 15106650    to: 15108642    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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