Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                ------>NtERF2             --------->LBD16  --------->GLK1(2)         <---------WOX13(1)  <---------ARR14(2)       --------->ATHB12      --------->ARR14(2)             ----------->GT1 --------->At4g35610   --------->GLK1(1)                   --------->DAG2 <---------At4g35610   --------->CCA1(2)                 ---------->DOF2  ---------->DOF2 ----------RAV1(2)---------->DOF2                     --------->YAB1    --------->ANAC58 --------HVH21--------->LBD16<---------GLK1(2)        --------->AHL20(2)--------->ANAC58 --ICU4<---------ICU4  <---------GLK1(1)         <-------TEIL         --------->MYB52(1) >ICU4<---------YAB1  --------->ARR11(3)        --------->CCA1(2)  --------->ANAC58 -YAB1--------->ICU4  <---------ARR11(3)       <---------ARR11(3)  --------->ANAC58       <----------DOF2   gtcagatgatgattgccgagaaaagatatcagattctaaacccaaacaagatacaattaaaaaggtcataagaaacgaaagtggaaattgtgcttctagt  15100900                                                                   ------>MYB83                                                                   ------>MYB46(1)                                                                  --------->ANAC58                                                                  --------->ANAC58                                                                 --------->MYB46(3)                                                             ----------->HVH21               <---------DAG2                                --------->WRKY38(1)               <----------DOF2                               --------->WRKY12                       <           --------->ZAT18                               <------ZmHOX2a(2)                    ------>ZmHOX2a(1)           <---------ZAT18                              --------->ARR11(3)                   <-------      ---------->DOF2            --------->GLK1(2)      <---------ARR11(3)             ---------->DOF2   taatctacaaaagtccacttttgttttggacccaaattctagattgaatgaaacacaagatcgatgaccagccagtagattaccaaaacaaaagtcctaa  15101000                   <---------ARR11(3)                   --------->ARR14(2)                   <---------GLK1(2)                   <---------ARR14(2)                   --------->ARR11(3)              --------->ANAC58              --------->ANAC58           --------->ARR14(2)           <---------ARR14(2)   --------->TOE1(3)           <------ZmHOX2a(1)   --------->TOE2(2)    --------->AHL20(2)                               ----------->GT1   --------->TOE1(2)    <---------AHL20(2)                             <------MYB46(1)              <  ----------->RAV1(2)  --------->AHL20(2)           <---------ALFIN1   <------MYB83             <---- -----------GT1  <---------TOE2(2)<----------DOF2  --------->ZAT14     ----------->GT1          ----- --MYB59 ----------->ARR10   --------->MYB59       <---------ZAT14  <------ZmHOX2a(1)          ------   tttaacctgagaagaaacgcagattttaaattaggacttttgttttggtattctacactctttcgatacaggaaggtgtaatttctgaatcaaatgaaaa  15101100                                                                                         <---------DAG2                               ---------->DOF2                                           <----------DOF2                              <---------AHL20(2)                                        <----------DOF2                             <---------AHL20(2)                                  <---------ZAT14    <-------TEIL             --------->AHL20(2)                                  --------->ZAT14 -------TEIL                 --------->YAB1                                     --------->ALFIN1   <- -----------AtSPL8<------ZmHOX2a(1)        ----------->GT1    <---------ANAC46  <---------REM1(1) --- ---->DAG2      <---------TOE2(3)  ----------->GT1       --------->MYB52(1) ---------->DOF2     ----- ---->DOF2----------------->AGL1   <----------ID1  <---------AHL20(2)   ---------->DOF2 <---------DAG2   agtacatacagtgccatttaggaaaaaacaattaaaagggtcaaattgtaaatttaaacgaactgtgtgaaacaaaaagaaagtgtagcgcctttttgga  15101200                                                                           <---------LBD16                                                                          <---------LBD16                                                                         ------->TEIL                                                                ----------->RAV1(1)                                                                <---------DDF1                                                                ================RAV                                                               ----------->HVH21                                                               --------->DEAR4(1)                                                               ------->GAMYB--------->LBD16                                                               --------->At1g77200                                                            <---------ALFIN1<---------LBD16                                              <---------ANAC46 --------->DREB2C(2)                                              <---------ANAC58 --------->DEAR3(1)                     --------->DAG2           <---------ANAC58--------->DEAR3(2)       <---------GLK1(2)----------->GT1       <---------ANAC55(1)   <---------At4g35610       --------->ARR11(3)                     <---------ANAC55(2)   --------->At4g35610 ---------ID1       ---------->DOF2      --------->ATHB12  --------->MYB46(3)                  ------ -------->GT1   --------->ANAC58 --------->TOE1(2)        ------->TEIL----------->HVH21       ------- ----->DOF2     --------->ANAC58--------->YAB1--------->ANAC55(2)   ----------->RAV1(2)       <------   aaggaaaaagattatggaacccaaaagtgtaaaatcgtaagagtgattacgtgagaaatgtaccaccgacatctgaaccggggggactcatcaaaacgtg  15101300                             --------->REM1(1)                            <-------TEIL                         <------MYB83                         <------MYB46(1)                        --------------->AtSPL8                        --------->MYB111(1)                        <---------MYB46(3)                        --------->MYB59                        --------->MYB46(2)        ------->TEIL                       <---------ANAC58                       <---------MYB55(1)         <---------ARR14(2)                 <---------ANAC58   <---------AHL20(2)<----------DOF2              <---------ARR11(3)          ------>NtERF2  <----------DOF2   -------------->OsCBT          --------->ARR14(2)         ----------->HVH21 *TSS              ------>NtERF2                 <---------CCA1(2)         --------->At4g35610 --->ALFIN1        --------->LBD16         --------->At4g35610             <---------At4g35610 >MYC3           <---------LBD16   <---------ALFIN1                    <----------DOF2       <------- -MYC3           <-----------------AGL1    <---------At4g35610     <----------DOF2  <---------MYB46(3)   gtcgttttattgtagtttctccgcgtttggtacatcaacacttgtagctgtgtatctttctaattcttcctttctttcgctgacagtgcttgctcacaca  15101400                                                                                         <---------ANAC58                                                                                         <---------ANAC58                                                                               <---------LBD16                                                                               ------>ZmHOX2a(2)                                                                              <------ZmHOX2a(2)            --------->At4g35610                                              <---------ARR14(2)        <-----------RAV1(1)                                                  --------->ARR14(2)        <---------MYB46(3)  <---------YAB1                                  <---------DEAR3(2)-------  --------->YAB1       ------>NtERF2                                    --------->O2     <---------AtLEC2 --ALFIN1   <---------At4g35610     <---------TOE1(2)               ------>NtERF2--------->LBD16   ctaatcgcaattgttgctgcattgccgactctgattcgttcgatttcagcattttgttcttccgaagcgatgcctcgtcgatccggagattgcatgagat  15101500                                                                                       <-------MYC4                                                                                       <-------PIF5                                                                                       ------->MYC2                                                                                       <-------MYC2                                                                                       ------->MYC4                                                                                       ------->MYC3                                                                                       ------->PIF5                                                                                       ------->PIF4                                                                                       <-------MYC3                                                                                      --------->O2                                                                                      ===============                                                                                      <---------TGA1a                                                                                      --------->ANAC46                                                                                      <---------O2                                                                                      --------->TGA1a                                                                                      <---------ANAC55(2)                                                                                      --------->ANAC55(2)                                                                                     ------------>OsbHLH66                                                                                    <---------ALFIN1                                                                                    <------------OsbHLH66                                                                                  <---------ALFIN1                                                                                 ====================                                                                                 ------>ZmHOX2a(2)                                                                                <------ZmHOX2a(2)                                                ================================================bZIP_DOF                                                <----------DOF2                 =====================                                        --------->ARR14(2)                     --------->ARR14(2)                                        <---------ARR14(2)                     <---------ARR14(2)                                       <---------TCP16(2)                    <---------MYB46(3)                                   --------->ALFIN1                         <---------TOE1(2)                                 <---------ANAC58                          <---------MYB52(1)              <-------GAMYB      <---------ANAC58 --------->ATHB12        <-------GAMYB<-------PIF4           <---------LBD16  --------->MYB52(2)<---------------AGL15       ======================MYC_MYB <---------At4g35610     <----------DOF2------->TEIL                     <---------ANAC58 ----------->GT1       --------->At4g35610    --------------->AGL15      <---------ANAC46 -->At4g35610<---------MYB46(3)  <---------ANAC46<---------YAB1          <---------ANAC58          <-   gtctggtgattttcgcggttgtatcagctttagttgtgtgtggacctgctctttattggaaattcaacaagggtttcgttggatccacacgtgccaactc  15101600                                                                                                    -                                                                                        =============            <---------ANAC46                                                          <---------ARR14(2)            <---------ANAC58                                                          <---------ARR11(3)            <---------ANAC58                                                          --------->ARR11(3)      ------>ZmHOX2a(1)              ---------->ID1                    <----------DOF2<---------AGP1=   ---------->ID1             ------>ZmHOX2a(1)                  <----------DOF2      --------->ARR14(2) =========bZIP_DOF   <---------WOX13(1)                  ------>ZmHOX2a(1)           <---------CCA1(2) ============HOX2a_HOX2a     <---------ALFIN1            --------->LBD16      <---------YAB1        = ============HOX2a_HOX2a   ------>ZmHOX2a(1)           ----------->RAV1(2)<XXXXXXXXXXXXXXXXXXXXXMIR850 ---------DOF2    <---------YAB1 <----------DOF2  <---------WOX13(1)  --------->TOE2(3) ------>ZmHOX2a(2)   tctttgtcctccttgcgtttgtgattgtcctcctcctttgtctcttctccagattgctcctggtatgctttacctttattctgatttggatcttacatgt  15101700                   <----------DOF2                                   <---------ICU4                <------ZmHOX2a(2)                                   <---------YAB1               <---------ARR14(2)                                   --------->ICU4               --------->ARR14(2)                               --------->ARR11(3)        --------->HSFB2a(2)               <---------ARR11(3)                               <---------ARR11(3)        <---------HSFB2a(2)               --------->AGP1                                  -------->HAHB4             --------->LBD16               --------->ARR11(3)                              <---------ICU4       <---------DAG2             ----------->ARR10                                 --------->YAB1       <----------DOF2         --------->ATHB12                                     --------->ICU4 <---------ANAC58         --------->YAB1          <---------ANAC58             <---------YAB1 --------->At4g35610        <---------YAB1           <---------ANAC58  <---------DAG2<---------YAB1 --------->ZAT18 ----->ZmHOX2a(1)------>ZmHOX2a(2)                 <----------DOF2--------->YAB1<---------ZAT18 ======HOX2a_HOX2a ------>ZmHOX2a(1)              <---------------AGL15      <---------At4g35610  <-- =======================HOX2a_HOX2a               --------------->AGL15      <---------ANAC58     <-- ======================HOX2a_HOX2a               ----------------->AGL1--------->ICU4     ------>ZmHOX2a(1)   tcctcgttttatgattagatccttttacaagtttttcttgtgaaatttagttccttttcgagtaatgatcataattttgaggtgcccttttcctcgaatt  15101800  Previous    Next  AGI:  At4g30996.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G24290.1); similar to H0311C03.8 [Oryza sativa (indica cultivar-group)] (GB:CAH67554.1); similar to Os04g0501800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001053232.1); contains InterPro domain Protein of unknown function DUF1068 (InterPro:IPR010471) Range:  from: 15101301    to: 15102690    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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