Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <---------TOE2(3)                                                        <-----------------AGL1                                                     <----------DOF2                                                    <----------DOF2                                                   ----------------->AGL1                                                 <---------PCF2                                                <---------RAP2.6(2)                                >>>>>>>>>SPL5   --------->ATERF1(1)          <---------ANAC58                                >>>>>>>>>SPL4  --------->SPL7                <---------ANAC58--------                                >>>>>>>>>SPL1  <---------At4g35610   --------->ANAC58    <---------TOE2(3)   <---------DAG2            ------->GAMYB    --------->ALFIN1       --------->ANAC58  ---------->DOF2 ---------DOF5.7(2)       ------------------>SPL14------>NtERF2 --------->YAB1      --------->AtLEC2 ------>DOF5.7(2)        --------->MYB46(3)<-----------RAV1(1)  ----------->GT1<----------DOF2     <-   gttaacctttcgcagttctcatgcttcacaaccgtacaattgtagatggtgcggcctttatggaaatggtaacgaaattgcctttcatacaaaggtaaag  14997400                                                                    --------->At4g35610                                                                   --------->ANAC46     <---------ARR11(3)            ------>ZmHOX2a(2)                              ---------->DOF2        <---------ARR14(2)           <------ZmHOX2a(2)                            <---------MYB46(3)        --------->ARR14(2)          --------->ARR14(2)                          <---------MYB52(1)          <-----------ARR10  ---------->DOF2<-------TEIL            --------->ANAC55(2)     --------->At4g35610   --------->REM1(1) -->DOF2  <---------ARR14(2)  >>>>>>>>>NAM          <---------DREB2C(2)          <---------CCA1(2) ---------DOF2--------->At4g35610     <-------TEIL  <---------DEAR3(1)       --------->AtLEC2   cctttaaagctggatccgatgcatcatccaagggatgatgttcatgtaatgaagccggtggtaaagcatcagcaacgtcttgcaaatctacatcttctgg  14997500              <-----------GT1     <-------GAMYB     <------NtERF2    <---------MYB46(3)                                                          ---------->DOF2   <---------ANAC58                                                   ----------------->AGL2   <---------RAP2.6(2)                                <-----------HVH21  ---------->DOF2   <---------   <---------ANAC46                                <---------ANAC58   ----------------->AGL1        -   <---------ANAC58    <---------At4g35610         <---------ANAC58  <---------------------WRI1     -  <---------LBD16<----------DOF2             <---------ALFIN1    <------ZmHOX2a(1)      <----------DOF2   tgatggcggatgagagttactttgcagcatagccttgttgaaaacaaacacttccctgtcacttgcaggaagtccaaaagcagaaagcagcttttgtggc  14997600                                                              ------->GAMYB                                                             --------->ANAC46    --------->At4g35610                                     --------->DAG2          --------->ANAC58    <---------At4g35610    <-------TEIL              <-----------------AGL1         --------->ANAC58 <-------TEIL --RAV1(1)               --------->At4g35610             <-------TEIL<-----------HVH21 -------->ANAC58         <---------At4g35610   --------->ANAC46   --------->ANAC58 -------->ANAC58        --------->GLK1(2)     <---------HSFB2a(2) --------->ANAC58 ------->GAMYB   tcaagcttcatgtctagcgagagaagaagctgatcagataaggcaataccagaaacagattcaacgaaacgcatcacagattcaactgaagtagtctcgc  14997700                                                                                             <-------                                              <---------ANAC58                               --------                                              <---------ANAC58                             --------->ARR14(2)                                             <---------HSFC1(2)                   <---------At4g35610                                    ---------->DOF2        <---------------------WRI1   --------->YAB1                                 --------->ANAC58        <---------DEAR3(1) --------->HSFB2a(1)                                 --------->ANAC58     --------->ATHB12      --------->HSFC1(2)    ---                               ----------->RAV1(1)----------------->AGL1    <---------HSFC1(2)-------                            --------->ANAC46 --------->HSFC1(2)             <---------At4g35610  ----   tgcattgaaattcaaacgagtggccattctcagccacacaaagaagaagcttgccatcatcggcgaaactctcagtgaagcttccgctcatcgtaaccac  14997800                                                                                        -------------                                                                                       --------------                                                                                       <-------------                                                                                       --------------                                                                                       --------------                            <---------ICU4              <---------TOE2(3)              <-------------                           ------------>CBF      --------------->AGL15              <------ZmHOX2a(1)                          --------->GLK1(2)      ====================================================                    ------->GAMYB                <---------------AGL15            --------->MYB59                    ----------->RAV1(1)         ----------------->AGL3   ------>MYB83  --------------                    --------->AtMYB61           ----------------->AGL2 <---------MYB111(1)               ------>ZmHOX2a(1)                =====================================================           --------->ARR14(2)                   <-----------------AG   <---------MYB59 <-------------  <------ZmHOX2a(1)--------->MYB46(3)           ===================================================== --MYB55(2)<---------ARR14(2)                   ----------------->AGL1 <---------MYB46(2) ->MYB46(3)<---------ARR11(3)             <---------ZAT14    ----------->GT1--------->YAB1 ------->DOF2 --------->TOE2(3)           --------->ZAT18   --------->DAG2 <---------ATHB12        -- >GAMYB    --------->ARR11(3)             --------->ZAT14 ---------->DOF2------>MYB46(1)<------------ ----->AtMYB61--------->TOE1(3)      ---------->DOF2    <---------YAB1--------->ANAC55(2)          --   caaaggacccaaaaatcctcaaccacagaatcaataccccaaagttcacagccaaattaagaaaggtgactcacctaatcaaattaggaaccaaaatagg  14997900    ------>NtERF2 -->AGL15                                    ------->TEIL --->AGL1                                    --------->ARR14(2) ----AGL1                                    --------->GLK1(2) --->AG                                   --------->ANAC58 --->AGL2                                 --------->ANAC46                           <---------WRKY18(1) ----AG                                   --------->ANAC58                          --------->WRKY12 ===MADS_MADS                           ------->GAMYB                               --------->WRKY38(1) --->AGL3                              --------->MYB46(3)                       <------ZmHOX2a(2) ===MADS_MADS                          <---------MYB55(2)                   ------>ZmHOX2a(1) ----AGL3                             -------->P                        <---------ARR14(2) ====MADS_MADS---------->DOF2         ------>MYB46(1)                   --------->ARR14(2)          < ------->ANAC58                       ------>MYB83  ---------->DOF2     <---------ARR11(3)        <-- ---AGL15   --------->YAB1           --------->ANAC46                  <---------CCA1(2)          --- ------->ANAC58         ----------->RAV1(1)  <---------ARR14(2) <----------DOF2--------->ARR14(2) <--   caaggctgccaaaatcaaaagccctccaacacaaaatcccaaccacgaatctgtaaaagcacagagcttttctatatcctcgatccttgaccaaaatcca  14998000                              <----------DOF2                                                   -----                       <---------LBD16                                                          -----                    --------->GLK1(2)                               <---------ARR14(2)          -----                    ------->TEIL                          <-----------GT1                    <-------TEIL -------TEIL        <---------ARR14(2)                <----------DOF2                       --------- -------GLK1(2)<-----------HVH21                   --------->ARR11(3)                      --------->ARR14(2) ------>ARR14(2)    --------->ARR14(2)             <---------ARR11(3)                      <---------ARR14(2) -------ARR14(2)   <---------CCA1(2)         --------->ANAC46       --------->ARR14(2)    <------ZmHOX2a(1)   gattcaccaaaaaccctcgtcgaatctcggagcttttgatatgtttcacagaagacctttaaaccccaagtatccagacctgatcacgaccaggatacac  14998100                                              --------->ANAC46                                              --------->ANAC58                                              --------->ANAC58                       <---------TOE2(3)   --------->MYB46(3)                   --------->At4g35610    ------>MYB46(1)        --------->GLK1(2)                 ------>MYB83        --------->ARR14(2)               --------->ANAC46        <---------ARR14(2)       ---------->DOF2       <-----------GT1 ---->ANAC58       <---------At4g35610   --------->MYB55(1)            ---------->DOF2    --------->AHL20(2) ---->ANAC58      --------->MYB52(2)    <---------MYB55(2)     <---------HSFB2a(2)     ------>MYB83 ---->ANAC46    <---------MYB52(1)      --------->MYB46(3)     <---------HSFC1(1)      ------>MYB46(1) >CCA1(2)       --------->DOF5.7(2)     <---------MYB111(1)    --------->HSFB2a(2)<-----------GT1   acaaattcagaatccagcgttagctaatgttatcccaaagtacccaccacgaaattttctcaattctcgaaatttaagcgaaattcaccaaatcaaatat  14998200                                                                                               ------                                                                <----------DOF2                ------                                                               <---------ANAC58       <----------ID1                                                         <------------------------ANAC81       <-----           <---------ARR14(2)                           <----------DOF2               ----------->GT1           --------->ARR14(2)                         ------>ZmHOX2a(1)              ----------->GT1           <---------ARR11(3)                     <-----------GT1        <-----------GT1      -------           --------->ARR11(3)          --------->HSFB2a(2)     <---------ANAC58    ---------->DOF2      <---------ATHB12        --------->MYB52(2) <-----------GT1<---------DAG2  --------->AHL20(2)  ------->GAMYB      <----------DOF2   <---------HSFB2a(2)   <-----------GT1    <---------AHL20(2)   tcaaccgaatcaatatcccccttctttcgccttcgttgcacccagaagaatttatcctcttttttgctttttttgtttctatttaaaaaggaaaaaaaaa  14998300  Previous    Next  AGI:  At4g30790.1    Description:  similar to protein transport protein-related [Arabidopsis thaliana] (TAIR:AT4G27595.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66620.1); similar to hypothetical protein OsI_005961 [Oryza sativa (indica cultivar-group)] (GB:EAY84728.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78826.1); contains domain SSF54236 (SSF54236) Range:  from: 14993092    to: 14997791    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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