Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            <---------ARR11(3)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------AHL20(1)      <------MYB46(1)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2) ------->ARR11(3)      <------MYB83------>ZmHOX2a(1)              <---------YAB1 ------->AHL20(1)     --------->MYB59 --------->AHL20(2)----------->GT1 --------ARR11(3)     <---------AtMYB61 <xxxxxxxxxxxxxxxxsmallRNA(le3)       ----------->GT1 ---->AHL20(2)----------->GT1   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     --------->AHL20(2)   aaatattcttacaagatagtaagtttggtctattgtcctataaattctagcatataactggtaacaatatgaaaaaaaaatgtaaaactatacatagatt  14989900                                                 <---------DAG2                                              <-----------GT1                                 xxxxxxx                                          <---------RVE1(1)                                <---------ANAC55(2)                                         --------->ARR11(3)                              <-----------GT1                                         <---------ARR11(3)             --------->AHL20(2) --------->ANAC55(2)                                         --------->ARR14(2)    <------ZmHOX2a(2)         --------->AHL20(2)                                <---------MYB52(2)<----------DOF2----------->GT1      <---------ICU4                      <---------TOE2(3) --------->YAB1        --------->ARR11(3)      --------->YAB1                      <---------YAB1   ----------->ARR10      <---------ARR11(3)     <---------YAB1                --------->AHL20(2)   ---------->DOF2      ---------->DOF2            --------->ICU4   acaaaaatgtagaaatcaaaaaataagattagcaaataacaaagatattcaccttttaatcaaagatcagtaaaaaaaatcgaagttataattacatact  14990000                                                                                 --------->ARR14(2)                            <---------CCA1(2)                             <-------PIF5                           ------->MYC2                                   <-------MYC3                           <-------MYC3                                   ------->MYC2                           ------->MYC3                                   <-------MYC2                           <-------MYC2                                   ------->MYC3                          <---------ANAC58                                -------->ABF1                          <---------ANAC58                                ------->PIF5                       ------->GAMYB                                      ------->MYC4                     ------>MYB46(1)                                      <-------MYC4                     ------>MYB83                                        <---------O2                   --------->DEAR3(1)                                    --------->ANAC46                   <---------ALFIN1                    ============================bZIP_DOF                   --------->AtMYB61            ===================================bZIP_DOF                  --------->MYB46(3)            ---------->DOF2          --------->ANAC55(2)                  <---------MYB52(2)           <---------AHL20(2)        <---------ANAC55(2)      <--               --------->MYB46(3)          --------->AHL20(2)            --------->O2             <--               <---------MYB55(2)          <---------AHL20(2)            --------->TGA1a         ----             --------->ANAC46<-----------ARR10 --------->AHL20(2) ----------->GT1<---------ARR14(2)<- xxxxxxxxxxxxxxxx>smallRNA(si3)    ------>ZmHOX2a(1)   ---------->DOF2   <---------TGA1a         ----   aacaaaaccaaaaacaaaccaccaacgcgcgtgtctcctccctagttaattaaaggcaaaaggaagacgagtaacacgtggcaaatactctatctgtagc  14990100                        <---------ALFIN1                        --------->REM1(1)                       --------->ZAT14                                                --------->TOE2(2)        --------->AHL20(2)                                                            --------->TOE1(2)        --------->AHL20(1)--------->ANAC46                                    --------->AHL20(2)        <---------AHL20(2)--------->ANAC58                                --------->AHL20(2)       --------->AHL20(2) --------->ANAC58        <---------MYB46(3)     --------->AHL20(1) ---------HVH21  --------->TCP15(1)              <--------P<---------At4g35610<---------AHL20(2) -------RAP2.6(3)--------->TCP20            --------->MYB52(1)   --------->AHL20(2)  --------->YAB1 ----->RAP2.6(2) <---------PCF2         <---------ARR11(3) <------NtERF2 <---------AHL20(1) -----NtERF2    <---------TCP23  --------->WOX13(1)       ------>NtERF2  <---------AHL20(2)   ------- ----->ANAC46   <---------TCP15(2) <---------ATHB12      --------->DEAR3(1)  --------->AHL20(2)   cgtcataaaaaaaattgtgggaccctacaccctataaatcaagaactactggttgttcgccagcgaattaactaaaatatttaataaacataagaaatga  14990200                                                                                       <---------DEAR3(2)                                                                                      <---------ANAC46                                                                                      <---------DREB2C(2)                                                                                      <---------At1g77200                                                                                      <---------DEAR3(1)                                                                                      --------->ETT(1)                                                                                    <-----------HVH21                                                                                   --------->ALFIN1                                                                                   ----------->HVH21                                                                                  ------->MYC3                                                                                  <-------MYC2                                                                                  <-------MYC3                                                                                  ------->MYC2                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                               <---------ANAC58                                                                               <---------ANAC46                                   <---------------AGL15                       <---------ANAC58                                  <-----------------AGL2                 <---------YAB1----------->GT1                                 <------NtERF2       ----------->RAV1(1)<---------TOE2(3)    <-----------GT1             <---------MYB46(3) --------->At4g35610 --------->MYB52(1)       <---- ---->HVH21<----------DOF2     <---------RAP2.6(2) <---------At4g35610 <-----------GT1<---------DEAR4(1)   caagtttagccctctttccataggcataacatggtggctaatttgggaatttcagcagcattcggagtcaaaataacgatagcgcgtgtcggtgaaatcg  14990300                                <----------DOF2                                ==================================HOX2a_HOX2a                            --------->ARR14(2)                  --------->ANAC46                  >>>>>>>>>AtERF-3                  >>>>>>>>>AtERF-5                  >>>>>>>>>AtERF-2                  --------->RAP2.3(3)                  --------->RAP2.3(2)                  >>>>>>>>>AtERF-1                  >>>>>>>>>AtERF-4                  --------->RAP2.6(2)                  --------->DEAR3(1)                       ------>ZmHOX2a(2)                  <---------ATERF1(2)                    --------->ARR14(2)                  --------->ATERF1(2)          ---------->DOF2--------->LBD16                 --------->RAP2.3(1)           *TSS      --------->ARR11(3)                 --------->ERF1 =================================HOX2a_HOX2a          <------NtERF2     <---------ARR14(2)--------->YAB1 --------->ANAC55(2)      --------->ANAC46  <------ZmHOX2a(1)    <---------ATHB12<---------ANAC55(2)     <---------LBD16 <-----------RAV1(2) ------------>CBF<---------ARR11(3)    --------->ANAC46<------NtERF2       --------->ANAC46 <---------ARR14(2)                     <---- <---------ARR14(2)<---------RAP2.6(3)<-----------GT1   --------->GLK1(1)                      <----- --------->ARR14(2)------>NtERF2------>ZmHOX2a(1)       <---------GLK1(1)         --------->GLK1(1)<- -----LBD16--------->ETT(2) --------->GLK1(2)<<<<<<<<<ARR2<------ZmHOX2a(2)    <---------YAB1  <-----   cggtatacgcgcgtcgatagccgccaggagaatcctttttttacacaatcaaagagagagatcccgtaaatgttttatactctgatttctagggtttgct  14990400                                                --------->ANAC55(2)                                                <---------ANAC58                                                <---------ANAC46                                                <---------ANAC55(2)                                ------>ZmHOX2a(1)                  <---------GLK1(1)                         <---------AHL20(2)--------->ATHB51 <---------MYB46(3)          <---------ANAC46      <----------DOF2 <---------ANAC58 <-------GAMYB       <----------DOF2   --------->AHL20(2)<---------ICU4   --------->MYB52(2) <---------GLK1(2)--------->LBD16  <---------ANAC46         <-----------RAV1(1) ------DOF2      <---------HSFB2a(2)      --------->ICU4  <---------MYB52(1) ----ANAC58 <---------ANAC58   <---------------AGL15    <---------ANAC58 --------YAB1    --------->HSFB2a(2)<---------LBD16     <---------ANAC58 ----ANAC58 <---------ANAC58   --------------->AGL15    <---------ANAC46   tttgattctctttcgcgttccagataaataaatccttttgtggaataatttcgtgatttcgtttgtgggttatccgaattttgtctgaatttgagttttt  14990500                                                                                      ------>NtERF2                                                                                      <---------RAP2.6(3)                                                                                    <------NtERF2                                                                                  --------->ALFIN1                                                                                 ------->PIF5                                                                                 <-------PIF5                                                                                --------->ZAT2                                                                                <---------ZAT2                                                                                --------->At4g35610                                                                                <---------At4g35610                                                                              <-----------RAV1(2)                                                                            --------->ATERF1(1)                                                                            <------NtERF2                                                                            ------>NtERF2                           <------MYB83                                   --------->ATERF1(2)                           <------MYB46(1)--------->ARR14(2)              <---------ATERF1(2)                           ----------->GT1<---------ARR14(2)              <---------RAP2.6(2)                           <---------MYB46(3)                             <---------DEAR3(1)                          --------->ALFIN1--------->GLK1(2)               --------->DEAR3(1)                          <---------AtMYB61                              --------->At4g35610       --                     --------->LBD16     --------->GLK1(1)             <---------DEAR3(1)          --                   <---------LBD16       <---------GLK1(1)           <---------ARR14(2)         -----                   <---------ANAC46    <------ZmHOX2a(1)             --------->ARR14(2)         -----                  <---------LBD16    <---------TOE2(3)      --------->LBD16------>NtERF2     <-------      --------->DAG2<---------LBD16--------->ICU4         <---------LBD16--------->ATERF1(1) --------   gagaaggaaaggtttgttttttcgggggatggtggaaatgaggaaatctggaggtttaagaccggagtctgaatcggcggccaggtgccgagatgagcta  14990600                                                            <------ZmHOX2a(2)                                                           <---------ARR11(3)                                                           --------->ARR11(3)                                                       --------->MYB52(1) --------->GT1                                        ------->GAMYB ------->LBD16                                       <---------MYB52(2) ---->MYB52(1)                                       --------->MYB46(3)                  ---------->ID1 --->P                                               <---------MYB55(2)             <----------DOF2 --At4g35610           <---------YAB1          ====================HOX2a_HOX2a    <------------------ ->At4g35610   --------->At4g35610             ------>ZmHOX2a(1)            <-----------GT1   <------   ccggtgaaattggagattgctgaagatgatttagaagaagagcatggtcctctcaacaaacgatctagggtttgtttatttctctccttttgtttttttc  14990700        <---------At4g35610              --------->YAB1        --------->At4g35610         --------->AHL20(2)                                         <-----   --------->At4g35610          <---------ATHB51                                               <-----   <---------At4g35610      <---------------------WRI1                           <-------GAMYB<------ <-----------RAV1(2)    --------->ARR14(2)                                   <---------At4g35610 ------ANAC81           <---------ARR14(2)    --------->ICU4----------->HVH21<---------ZAT2   ------- -----GT1     ------>ZmHOX2a(2) --------->ICU4<-----------ARR10<---------AtMYB61<---------MYB46(3)  <   ttctcagatgagctgatctaattcagtttctgcgataattcaatagcaattcttagcatgcagtgatggttttatatttagctggttgtgaattgtttgg  14990800  Previous    Next  AGI:  At4g30780.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G24100.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66612.1) Range:  from: 14990347    to: 14993075    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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