Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    <---------SPL7 <---------ANAC58                                                                                   - <---------ANAC58                                                                             <------ZmHOX2a(1) --------->ID1                                                                            --------->TOE1(2) -->ATHB12                             --------->CCA1(2)                                  --------->TOE2(2) ---ICU4              <---------------AGL15   --------->CCA1(2)      <---------ICU4    ----------->RAV1(1) --YAB1       ------->TEIL            <---------ARR11(3)        ---------->DOF2      ---------------- ->ICU4 --------->ARR14(2)     --------->AHL20(2)          <---------ANAC46          <---------------   ttgtcgtcccaatatgcacatatgcttatacaagtatatagatataagatttgatttgatgacttagaaagtcattacttccatatgtccaacataggaa  14952300                                                                 <---------GLK1(2)                                                      <------MYB46(1)                                                      ----------->GT1                                                      <------MYB83               <---------MYB46(3)                                              <-----------------AG--------->GLK1(2)           <-----------GT1                    <-----------------AGL1         <---------MYB46(3) -------->TOE2(3)   --------->YAB1      ------>ZmHOX2a(1)        <---------GLK1(1) ->AGL1 --------->YAB1<---------YAB1    <----------DOF2    --------->ICU4 <-----------RAV1(1) --AGL1 <---------ICU4--------->ICU4 <---------YAB1  --------->MYB59      <---------MYB46(3)   aacctttgaataataactcttgtcataagtgactacattatccttttaatccaatttggtaattagggaatctcatttgttgttggatgttcttactcat  14952400                                                                                      ----------->GT1                                                                                     --------->DAG2                                                                              <------------CBF                                                                          --------->YAB1                                                                         <-----------------AG                                                                         ----------------->AGL3                           <---------MYB52(1)              <---------YAB1----------------->AGL2                  --------->At4g35610                     --------->AHL20(2)<---------YAB1                <------ZmHOX2a(1)                      --------->TOE2(3) <-----------------AGL1   ---       ---------->DOF2--------->ARR14(2)       --------->MYB52(1)      <---------GLK1(1)     <-------      --------->YAB1  <---------ARR14(2)      ----------->HVH21        --------->GLK1(1)   <---------YAB1   tctcttaatcaaagtcgaggagcagaaccgttttgctccaacttcaaactgacagaacattaatataaactggatatcaaaattggaaaggttactaatg  14952500         --------->DAG2                 <---------ANAC58   --------->YAB1                       <---------ANAC58    --------->DAG2   --------->AHL20(2)         ---------->DOF2        <---------At4g35610  <---------ATHB12         ----------->GT1   <---------YAB1---------->DOF2 --------->CBF   <---------MYB52(1)   <---------YAB1 --------->At4g35610            --------->WRKY38(1) --ICU4 ---------->DOF2    <---------ANAC55(2)  <---------HSFB2a(2)               <------------CBF  <   accaataaaaaaaagctctgttttgtaataggtaaagagcatgcttgattatagaagctgaaaaagtctcagcatttttgtttccattgactacatttat  14952600                                                                                               ------                                                                                       <---------MYB46(3)                                                                                       ------>NtERF2                                                                                       --------->LBD16                                                                                      <---------ANAC46                                                                                      --------->ALFIN1                                                                                      <---------DEAR3(1)                                                                                     <---------LBD16                                                                                    ------->GAMYB                                                                                   <---------DEAR3(1)                                                                                 --------->MYB52(1)              ---------->DOF2                                                    <---------DOF5.7(2)    <---------TOE2(3)                                                           <---------WRKY12 <---   >>>>>>>>>WRKY18                                <----------ID1                <---------WRKY45 ----  --------->WRKY12                    --------------->AtSPL8           ------>ZmHOX2a(1)<------NtERF2 ------------CBF        <---------ICU4--------------->AtSPL3    ------------>CBF<---------WRKY38(1) -   tccattgacgataaaaaaaagtctcaacatttcaagtctattcgtactcaaaacgacgaagcgttcttcaatcctatggaagtcaacggcggggaaggaa  14952700                                                   <---------ARR11(3)        --------->ANAC58          <---------ARR14(2)           --------->WRKY12                      --------->ANAC58 ---->DOF2--------->ARR14(2)           --------->WRKY38(1)          ----------->HVH21 ------AtMYB61                       --------->At4g35610      <---------ARR11(3)              ------- ----->DAG2 ------>ZmHOX2a(2)        <---------At4g35610      --------->ARR11(3)   <------ZmHOX2a(1) -------->ALFIN1         ----------->HVH21         --------->ARR11(3) <---------LBD16  ---------->DOF2   aggtggagatgggatcgggactctaccctgactggtctgagttgactcgagaatgtcttcttgacatcttctcacggctaagccaggaacaaagatggat  14952800                                             ----------->RAV1(1)                                            <---------ETT(1)                   <---------ARR14(2)       --------->ANAC46                   --------->ARR14(2)       ----------->HVH21                 --------->ANAC58           --------->ANAC58                 --------->ANAC58           --------->ANAC58                               ==========              --------->At4g35610      ----------->HVH21                                   ----------             --------->ANAC58     --------->ANAC58                                     <---------SPL7             --------->ANAC58     --------->ANAC58                                    <---------ANAC58       <---------ANAC58       --------->ANAC58        --------->ANAC46                <---------ANAC58       <---------ANAC58       --------->ANAC58     --------->ZAT14                 ================== -->ATHB12<-----------HVH21  ------->TEIL  --------->MYB46(3)                      <-----------RAV1(1)   tggaccgatgctggtcagcaagaactggatgaacgcatgctatgacccgacactaaacaccatcttcgacctcgaaactcggtttctgtcgttccctgag  14952900                                                                                         <-------TEIL                                                                                        --------->CCA1(2)                                                                                        --------->GLK1(2)                                                               ------>ZmHOX2a(2)        --------->ARR14(1)                                                               =================HOX2a_HOX2a    <-----                               --------->DAG2           <---------MYB46(3)             --------->ARR11(1)                              ---------->DOF2        <-----------RAV1(1)               --------->ARR14(2)                           <------ZmHOX2a(1)        ------>ZmHOX2a(2)                  <---------GLK1(2)                 --------->LBD16                    ============================HOX2a_HOX2a   <------ZmHOX2a(2)          <---------ZAT18  ================================HOX2a_HOX2a         ----------->HVH21 =================================HOX2a_HOX2a      =============================HOX2a_HOX2a  <------- <------ZmHOX2a(2)--------->LBD16      <-------TEIL<------ZmHOX2a(2)     <------ZmHOX2a(1)   -------- =================RAV      ===============================HOX2a_HOX2a    ============================HOX2a_HOX2a ->RAV1(2)--------->ZAT18<---------TOE1(3)        <---------ARR14(2)--------->ALFIN1   <---------ARR14(2) ==RAV<-----------RAV1(1)<---------TOE2(3)        --------->ARR14(2)----------->HVH21----------->ARR10   tcgatcaactggtggactcccgagtttgaggataaagtcgattcatttctccgatctgttgttgatcggagtgaaggaggtctcacagagattcggatca  14953000                                        --------->ANAC58                                        --------->ANAC58                                        <---------ANAC55(2)                                        <---------ANAC58                                        --------->ANAC55(2)                                        <---------ANAC58                                   --------------->AtSPL3                                   <---------------AtSPL8                                ------>NtERF2                               --------->DEAR3(1)                              <------NtERF2                             ------>NtERF2                             --------->ABI4(1)                             <---------ATERF1(1)                            --------->RAP2.3(3)                            --------->DEAR3(1)                            --------->RAP2.3(2)                            <---------DEAR3(1)                           --------->RAP2.6(1)                           --------->ATERF1(1)                           --------->RAP2.3(1)                           --------->ORA47(2)       <---------ANAC46                           --------->ERF1           <---------ANAC58                          <---------RAP2.3(1)       <---------ANAC58                         --------->ANAC46       <----------DOF2                         --------->ANAC58    <-----------GT1                         --------->ANAC58  ------->TEIL  --------->ICU4                ----------->GT1 ------RAV1(2)          --------->SPL7 <-------TEIL --------->ANAC55(2)               <---------TOE2(3) --ARR14(2)       <---------CCA1(2)<---------------AtSPL3<---------YAB1  <---------ANAC58 ->ARR14(2) ----------------------->TaNAC69(2)  <---------DAG2           <---------ANAC58   ggcattgtacagaacgctctctatcttacgccgccgagaggtacgtatcacttttcgtgataattctcagttttagcttgagtccatagaggttaatcgc  14953100                                              --------->ZAT18                                              <---------ZAT18                                            <-------PIF5                                            <                                            ------->PIF5                                          <--                                            --------->ATERF1(1)                                  <---                                  ----------------->AGL3                                         <---                          <---------O2     --------->ZAT2                  <---------ARR14(2)    <---                 <---------AHL20(2)        <---------At4g35610         ---------->DOF2          <----                 --------->AHL20(2)        --------->At4g35610  <----------DOF2              <-------    <---------YAB1    <-----------HVH21  <-----------RAV1(2)  <-------TEIL --------->ARR14(2)--------   agagttttgatagaatgaataaaatgtcatgtggtttccatttgcaggtgccctaatctagaggtactttggataaagaactgcccaaatgttacagatg  14953200  Previous    Next  AGI:  At4g30630.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G57910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66657.1) Range:  from: 14950644    to: 14952382    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g30640.1    Description:  F-box family protein (FBL19). Identical to Putative F-box/LRR-repeat protein 19 (FBL19) [Arabidopsis Thaliana] (GB:Q9M096); similar to SKIP1 (SKP1 INTERACTING PARTNER 1) [Arabidopsis thaliana] (TAIR:AT5G57900.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66654.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat; (InterPro:IPR001611) Range:  from: 14952676    to: 14953688    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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