Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           <-------MYC3                         <-------MYC4                         ------->MYC4                         ------->MYC3                         <-------PIF5                         ------->MYC2                         ------->PIF5                         <-------MYC2                        =================bZIP_DOF                        <<<<<<<<<<HY5                        --------->PIF3(3)                        <---------PIF3(3)                        --------->O2                   <XXXXXXXXXXXXXXXXXXXXXMIR402                        --------->TGA1a              <---------ANAC46                        <---------TGA1a              ----------->GT1                        <---------O2             <------------CBF                      <---------ALFIN1      <-----------------AGL3                     ---------------->PIF3(2)   --------->ATHB12               <------------CBF          --------->ARR14(2)               xxxxxxxxxxxxxxxx>smallRNA(i) ====================================================MADS_MADS               >>>>>>>>>ARR1             <---------ARR11(3)               >>>>>>>>>ARR2             --------->ARR11(3)                     --------------->AGL15              xxxxxxxxxxxxxxxx>smallRNA(s) ------>ZmHOX2a(2)                   <---------ANAC46             <---------YAB1              <---------ARR14(2)                    <---------ANAC58             <---------TOE2(3)---------->DOF2 <---------MYB52(1)               <---------ANAC58   ---  ================================bZIP_DOF<------ZmHOX2a(2)             <------------CBF    ---------  ---------->DOF2   ----------------->PIF3(1)--------->TOE2(3)        <---------YAB1       ---------- >CCA1(2)--------->YAB1 <---------ANAC46<------ZmHOX2a(1)        <----------DOF2<---------------AGL15   ttcttaaagactaataagattgtgccacgtggaaaagcttgaggatcccttaattgggtttaatgggcttttaaaattgatgcttatatgagaaaaagcc  14950200                                  --------->YAB1                                 <---------ATHB51                     --------->ARR14(2)                                                      --------                     <---------ARR14(2)                                                      <-------                    <------ZmHOX2a(1)--------->YAB1                                          -------- ------->DOF2     <---------TOE2(2)  --------->AHL20(2)                                     --------- >DAG2            <---------TOE1(2)  <---------AHL20(2)                         ---------->DOF2  <--- >DOF2         <-----------GT1   <---------ATHB12                      ------->TEIL   --------->AHL20(2)   caaagaagagattattttcacaggatttgggtccaataataatatgagaaattgagaattatgcaaaaacatgtatttgactaaaagaataaataaaagt  14950300                                    <---------ICU4                                   <---------ATHB12                                  ------>MYB83                                  ------>MYB46(1)                                                ----                          --------->ANAC46                                                       ----                      --------->ANAC58                                         <-----------GT1 ------ ------->AtSPL3       --------->ANAC58                          <---------ANAC58               ------ --------AtSPL8       --------->ANAC46--------->At4g35610       <---------ANAC58        ---------->ID1 ------->AtSPL8     --------->ANAC46--------->YAB1<---------CCA1(2)       ------>ZmHOX2a(1)    <----- ->DOF2           <-----------GT1--------->WOX13(1)--------->ARR14(2)   ----------->RAV1(2)   ------- ----TEIL  --------->ANAC46<-----------HVH21  <-----------HVH21 <---------ANAC46    <---------MYB52(1)   acatcatatatacacacattatacacaccagtcaccaatcatctctcttgtcaaatctccatagttgcttcttctcctgtttcactgtttgtctcaacca  14950400       <---------AHL20(2) -->MYB83                                                         <-----------GT1                  <- -->MYB46(1)                                         <---------ARR14(2)                            == --->AtMYB61                                         --------->ARR14(2)<----------DOF2             <- ->GAMYB                                  <----------DOF2   --------->YAB1                   -------- ----MYB59          <----------DOF2    <---------ARR11(3)----------->RAV1(1)<---------CCA1(2)<------- -->MYB46(3) <-----------GT1    --------->ANAC46 <-------TEIL  --------->YAB1             <----------   aactcttatttttttttgctctctttctctctataccccaatttctttacatacatatccaacaatattaactctttcatctcttcaataacccagatgt  14950500                                    --------->AtMYB61                                   ======================================MYC_MYB                                   --------->ZAT2                                   =================bZIP_DOF                                   --------->ANAC46                                   --------->O2                  ------->GAMYB                                   --------->bZIP60(2)          --------->MYB46(3)                                   --------->TGA1a        <---------ICU4   <---------AHL20(2)  --------->AHL20(2)                 --------->YAB1 ---------DOF2         <---------AHL20(2)---------->DOF2 <---------ATHB12 ============================================bZIP_DOF  --------->WOX13(1)              <----------DOF2 --------DAG2    <-----------GT1  ------>MYB46(1)   --------->ANAC58       ---------->DOF2 ->ARR14(2)    ==============================bZIP_DOF------------>CBF------------>CBF <---------DAG2 --ARR14(2)    <----------DOF2    ------>MYB83      --------->ANAC58--------->YAB1  ------->TEIL -RAV1(2)  <---------GLK1(2)     <---------ALFIN1  ------->TEIL <---------MYB52(2) <---------ARR14(2)   gctttttaattcaaattctttacaatttatcaaacccacctcacaaagacatgaacccaatcatcaacaaacacaataaaaggaagaaccttttttttgg  14950600                                            *TSS                                          <------ZmHOX2a(1)                                         <----------ID1                             ----------->GT1                                      ---------->DOF2                           --------->CCA1(2)                                    --------->HSFB2a(2)                    ---------->DOF2         <-                           --------->HSFB2a(2)                     ---------->DOF2----------->GT1  <-              ------------>CBF      <---------HSFB2a(2)      ----------->GT1 XXXXXXXXXXXXXXXXXXXX>MIR1886.1 <---------ANAC46          <---------HSFB2a(2)           --------->YAB1---------->DOF2       --------   gttaagtggtcagcatttcaataccccttctgcaacttccaaaaggacacacatagaaataataagtgaaaaagaaagaaagaaatgagaaaaaatcaaa  14950700                                                                                                -----     <----------DOF2  <----------DOF2                                                     -----------  <------------------------ANAC81                                                     ---------->DOF2 ---------DOF2    ------>ZmHOX2a(1)  --------->ZAT6    <---------At4g35610       --------->ANAC58 --------DAG2<----------DOF2   <----------DOF2 <---------TOE1(2)                 --------->ANAC58  -- ->YAB1  <----------DOF2<-----------GT1       ------>ZmHOX2a(1)---------->ID1    --------->ANAC46 ---   actttttctttctttctttcctctctttaccatctttgatcactagtcctagttttctgctacttgtctcatagacttctcacacacaaaaagaagagaa  14950800                                                          ----------->GT1  <-----------RAV1(1)                    <---------ICU4                     ---------->DOF2  <---------ATHB51    --------->GLK1(2)        <---------ARR11(3)        --------->MYB52(1)--------->YAB1   --------->GLK1(1)--------->AHL20(2)               --------->MYB46(3) <---------ATHB12 ----->DOF2         <---------AHL20(2)              --------->ANAC58  --------->WOX13(1) ------------->ANAC81  <-----------GT1           <---------ZAT18     --------->AHL20(2)           <-- --------->GT1  --------->AHL20(2)               --------->ZAT18  --------->WOX13(1)            <---- -------->GT1   <---------AHL20(2)   <---------YAB1 --------->ANAC58<---------ATHB12       <---------   aaggaaaatccaaaatttttaattttttcaatatcaattttgtttgtaatgggcacccaaaggaaaatcaatcaattatgtggtttcttaagtcttttgg  14950900                                                    <---------DAG2                         <---------                                                    <----------DOF2                   ------>MYB83                                             --------->YAB1                         --------->AtMYB61                                             <---------ICU4                         --------->DEAR3(1)                                            <---------ATHB12                     <---------ALFIN1   ----------->GT1                        ------>MYB46(1)                        --------->ANAC46 -------WRKY12                            ------>MYB83                       <-----------HVH21    <-- -------HVH21                           --------->TOE2(3)                    ------>ZmHOX2a(1)    <-- -DOF2                                  <---------MYB59               <----------DOF2 ------>MYB46(1)   tcagagggtttcatacatggaataagactctcaccattaaaacctaatcatcccctttaccttcgcttccttctttctccttcacacctccctctttctc  14951000                                                                                          --------->ARR14(2)                                                                                          <---------ARR14(2)                                                                                       <------NtERF2                                                                                      ------>NtERF2                                                 --------->At4g35610                 --------->ALFIN1                                               ==================================HOX2a_HOX2a                                               ------>ZmHOX2a(2)                     <---------DEAR3(1)                                              ===================================HOX2a_HOX2a                                        --------->MYB52(1)                       <---------LBD16 ----                                       --------->ZAT14                       <---------At4g35610-----                             ------>ZmHOX2a(1)<------ZmHOX2a(2)              --------->At4g35610<----                             ========================HOX2a_HOX2a          <---------At4g35610  <-----  <---------ANAC58           =========================HOX2a_HOX2a         ------>ZmHOX2a(1)<------ZmHOX2a(2)  <---------ANAC58       <---------ARR14(2)  --------->ARR14(2)           ========================HOX2a_HOX2a  <---------ANAC46 --------->TOE2(2)   <---------ZAT14                --------->ARR14(2)<---------ANAC58 -DOF2     <----------DOF2  --------->TOE2(3)<---------ARR14(2)       <---------ARR14(2)<---------ANAC58 -------ANAC58   <---------ARR14(2)  --------->ANAC46              <---------ANAC58 <---------MYB52(1) -------ANAC58   --------->ARR14(2)<-----------GT1                 <---------ANAC58--------->LBD16   gcttgcttgctgtctttccaatctgcgattcctaaattcactgaacggatccgatgaagaagactaatttcgtttcctctgcttccggtggcgatcccat  14951100  Previous    Next  AGI:  At4g30630.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G57910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66657.1) Range:  from: 14950644    to: 14952382    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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