Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->YAB1                                   <---------ZAT6                                 <---------ATHB12        <----------DOF2            ----------->GT1                                --------->ICU4   --       <---------DAG2            ----------->GT1 <----------DOF2            --------->WOX13(1)    <--     ------>NtERF2           <---------TOE2(3)------->TEIL              <---------ANAC58      <------  <---------At5g28300     <---------YAB1    <-------TEIL                <---------ANAC58      ======= <-----------GT1      <---------ATHB12 --------->AHL20(2)<---------AHL20(2)<-------TEIL       <------   tttttaccgcctttccatttcccaatctattaatgtagtgataaaatgcatctttccatttttttttttttttgacgtccatcaatgatcaaatcccttt  14922900                                             --------->ANAC55(2)                                             <---------ANAC55(2)                                            <-------TEIL                        ----------->GT1                                          <---------ARR14(2)                 <-------MYC3                                          --------->ARR14(2)                 ------->MYC3                                   <-----------HVH21                         ------->MYC2                                  --------->ANAC58                           <-------MYC2                                  --------->ANAC58                          <---------TGA1a                                  ===============================================bZIP_DOF                                  --------->ANAC46                          --------->ANAC55(2)    <---------ANAC58              <---------O2                              --------->ANAC46       --    <---------ANAC58              --------->TGA1a  --------->YAB1           <---------ANAC55(2)    -- ------->ATHB12                   <---------TGA1a --------->ICU4            --------->O2          --- -------YAB1     --------->GLK1(2)--------->bZIP60(2)   ----------->GT1     --------->TGA1a    >>>>>> ---DAG2    ---------->DOF2       --------->O2    <---------YAB1            <---------O2<---------YAB1 ===========================================bZIP_DOF--------->ARR11(3)================bZIP_DOF<------ ----DOF2   ================================bZIP_DOF>>>>>>>>>>GT-1    ---------->DOF2   <---------TOE2(3)   acgattgcgattcacaaagaatcaatgccaaaatacacgtcgcaaattcgtaatgatatagtataatgcccaaaaaacacgtgagtaaataagattaaac  14923000                                                                  <------------CBF                              <---------AHL20(2)        --------->LBD16                       ----------->GT1           <---------------AGL15                   --------->ARR14(2)         --------->ZAT6     ------>MYB83                   --------->ARR11(3)       --------->YAB1       ------>MYB46(1) ---->MYB83        <---------ARR14(2)       -------->HAHB4     --------->TOE2(3) ---->MYB46(1)     <---------ARR11(3)      <---------YAB1      <---------MYB59 ------>MYB52(1)  <---------CCA1(2)      --------->YAB1--------->LBD16              <---------------- >>>>MYB80      <---------ANAC55(2)     <---------YAB1<---------LBD16     <---------ANAC58 -----GT1       --------->ANAC55(2) ----------->GT1  <---------LBD16      <---------ANAC58   caactgtaatgtctaatcacatatcttgtaatttaaaccggtataataatactaaaccgggaaaacctaattgttgtcttgcattttccctctatggctc  14923100                --------->GLK1(1)                <---------GLK1(1)        --------->AHL20(2)                                              <---------MYB46(3)        <---------AHL20(2)                                  --------->TOE2(3)       --------->AHL20(2)                                --------->ARR14(2)       <---------AHL20(2)   <-------TEIL                 <---------ARR14(2)   <---------YAB1        <---------At4g35610    <---------TOE2(3)     <-------GAMYB   --------->ICU4        --------->At4g35610   <-----------GT1        <---------At4g35610 -AGL1 --------->YAB1 <---------MYB52(1)      <-----------GT1  --------->AHL20(2)   aaggtataattaaaatggatatcagttagatgcatactgcatacgtttttaacatttcgaatccataaattcagttgttgcgataatccaaaactaattt  14923200              ------>MYB46(1)              ------>MYB83            <---------MYB59            --------->AtMYB61           ------>MYB46(1)       --------->ANAC58                 ------>MYB83       --------->ANAC58               <---------MYB59                    <---------ARR14(2)       --------->ANAC55(1)    <----------DOF2                            --------->ARR14(2)       --------->ANAC46    --------->ARR14(2)                       ------>ZmHOX2a(1)      <---------LBD16      <---------ARR14(2)                     ============================RAV  --    <---------REM1(2)     <---------MYB52(1)   <------------CBF   ----------->RAV1(2)       ---------    --------->ZAT14   --------->MYB52(1)--------->MYB52(1)       ------>ZmHOX2a(1)  <---------ALFIN1    <---------ZAT14 ---------->DOF2   --------->AtMYB61    ------>ZmHOX2a(1)      ----------->RAV1(1)   gctcagtacacggaccaaaccaaaaaccggttcttttagaccaaaccgaaattgtctactcctagtcctcctgcatatatgccccaacacatctctcaat  14923300                                                                            --------->GLK1(2)                                                                           --------->ARR14(2)                                                                           <---------ARR14(2)                                                    --------->ANAC58       <---------GLK1(2)               <---------ARR11(3)                   --------->ANAC58  ------>NtERF2               <---------AHL20(1)                  <-------TEIL --------->ANAC46                   --               --------->ARR11(3)                 --------->CCA1(2)  --------->ANAC58              <-              --------->CCA1(1)                  --------->ARR11(1)  --------->bZIP60(2)         <---              --------->RVE1(1)                  --------->ARR11(3)  --------->ANAC46           <----            --------->AHL20(2)                   <---------ARR11(3)  --------->TGA1a           <-----            --------->YAB1           <---------At4g35610        --------->ANAC58              <------       ------------>CBF   ------------>CBF       --------->ARR14(2)  --------->ANAC58       <------ZmHOX2a(1)      --------->TOE2(3) ----------->HVH21        <---------ARR14(2)  <---------O2    <---------ANAC46 ---->ZmHOX2a(1)  <----------DOF2<---------REM1(1)--------->ARR14(1) --------->O2    <---------ANAC58 --->CBF   <---------ATHB12    --------->YAB1  ----------->ARR10--------->ANAC58     <---------ANAC58   cctctcatcgtcaataatatctttatatgacaatggtgaagcagataagaagatacgctctatttcaagccacgccagattctgagttcgtgaaggagat  14923400                                                                        ------>ZmHOX2a(2)           -                                                                        ======================HOX2a_HOX2a                                                                        --------->ETT(2)           <-                                                                 --------->LBD16                  <--                                                                <---------ANAC58                  <--                                                                <---------ANAC46                  ---                                 <---------ANAC46               <---------ANAC55(1)               <--                              <----------DOF2              <----------DOF2              --------->ANAC46                            <------NtERF2                 ====================================HOX2a_HOX2a                          <---------RAP2.6(2)             ------>ZmHOX2a(2)            ------>ZmHOX2a(1)                          <---------DEAR3(1)             <------ZmHOX2a(2)             ==============                          <<<<<<<<<<DREB1A               =====================================HOX2a_HOX2a                          --------->ETT(1)              --------->ARR14(2)             ==============    <---------ATERF1(1)   <<<<<<<<<<DREB2A              <---------ARR14(2)         <---------ARR14(2) ----->TEIL              --------->RAP2.6(3)            <---------ARR11(3)    <---------ANAC46    --- --------LBD16          <-----------HVH21               --------->ARR11(3)   <------NtERF2        <-- ------SPL7          <---------ANAC58       =====================HOX2a_HOX2a------>NtERF2         --- -----REM1(1)        <---------ANAC58       <------ZmHOX2a(1)   <---------ANAC58   --------->ARR14(2) ----------AtSPL3 <---------ARR14(2)        ===================================HOX2a_HOX2a----------- ------------SPL14--------->ARR14(2)        ====================HOX2a_HOX2a<---------DEAR3(1)   -----   gtacggaggctacttcaacgtattcgtgtcggctttcggagacgaaggagagcaatgggatcttttccgtgtgatcgacggcgagtttcctcgcgacgaa  14923500 ----->ZmHOX2a(2) -----ZmHOX2a(2) -------AGP1 -------ARR14(2) ------>ARR14(2) -------ARR11(3)                                                            <----------DOF2 =====HOX2a_HOX2a                                   --------->ANAC46--------->ATHB12 ======HOX2a_HOX2a                              <-----------HVH21  <---------YAB1 ------>ARR11(3)         --------->ICU4        <----------DOF2     <------ZmHOX2a(2) -------ARR14(3)         <---------YAB1  ----------->TGA1    <---------ARR14(2) ------>ARR14(3)   <-------TEIL          ----------->HVH21   --------->ARR14(2) >HVH21          --------->ARR14(2)    --------->ANAC55(2)  <------ZmHOX2a(1) ------>ARR10    <---------ARR14(2)    <---------AtLEC2     ==============HOX2a_HOX2a   gatcttgagaagtatgagggattcgtcattagtgggagtttacatgacgctttcacagaagaggattggatcattgagctttgctctgtttgcaaaaaac  14923600                                  <---------AtMYB61              <---------TOE1(2)                 --                                <----------DOF2           <---------YAB1                       <-----                            <-------MYC3                <-----------GT1                        ------                            ------->MYC2                --------->YAB1                         ------                            ------->MYC3            <---------YAB1                             <-----                --------->HSFB2a(1)                 --------->ICU4                       <---------AHL20(2)                <---------HSFB2a(1) <-----------HVH21  <---------YAB1        <<<<<<<<<TBF1--------->AHL20(2)            ----------->GT1 <-------MYC2 <-----------RAV1(2)  --------->MYB46(3)    <---------ATHB12           >>>>>>>>>TBF1  ---------->TaMYB80        <---------AHL20(2)    <<<<<<<<<TBF1  --------->AHL20(2)   ttgatgtgatgaagaagaaaattcttggcatatgctttggtcaccaggtttgatattattatcatccaacgttttcttcttcttctatcatttaaaatat  14923700                          -------->P                       <---------ANAC58                       <---------ANAC58                       <---------ANAC55(2)                       --------->ANAC55(2)                     <---------AHL20(2)         <---------AHL20(2) --------->ZAT6                            --------->ANAC55(2) <---------YAB1      <-----------GT1                    <---------AtLEC2 ------->YAB1        --------->AHL20(2)   <----------DOF2             <---------ANAC58 ----AHL20(1)    --------->AHL20(2)      <---------ICU4<-------TEIL   --------->YAB1                < --->AHL20(1)    <---------AHL20(2)    --------->ARR11(3)             <---------ANAC58            <-- --->ARR11(3)<---------AHL20(2)        <---------ARR11(3)       <-----------GT1  <----------DOF2  --- ----ARR11(3)--------->AHL20(2)  ----------->GT1  ---------->DOF2  <----------DOF2            -------   atcatacttgtataattttttaattacttaccactaggtaaaatctttacataaaagtgcatgttttttctttcgtaatttctctttttaaaattcgatg  14923800  Previous    Next  AGI:  At4g30540.1    Description:  glutamine amidotransferase class-I domain-containing protein. similar to defense-related protein, putative [Arabidopsis thaliana] (TAIR:AT2G23970.1); similar to defense-related protein [Brassica carinata] (GB:AAK50344.1); contains InterPro domain Glutamine amidotransferase class-I; (InterPro:IPR000991) Range:  from: 14923333    to: 14925112    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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